RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 CCL25O15444 150 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 CRPP02741 224 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 PPBPP02775 128 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 S100A8P05109 93 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 ADIRFQ15847 76 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 MRPL51Q4U2R6 128 aaKnown RBP2.95□□□□□ -1.94
IFT43-207ENST00000554233 AMN1Q8IY45 258 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 C9orf163Q8N9P6 203 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 FAM104AQ969W3 186 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 ST20Q9HBF5 79 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 TMEM242Q9NWH2 141 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 DHRS4-AS1Q9P1J3 65 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 LAMTOR2Q9Y2Q5 125 aa2.95□□□□□ -1.94
IFT43-207ENST00000554233 TRAV9-1A0A075B6T8 112 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 EPM2AB3EWF7 344 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 F8W036 122 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 H0Y9J4 135 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 K7EMI3 77 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 APCSP02743 223 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 FGF6P10767 208 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 ADCYAP1P18509 176 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 KRTAP10-4P60372 401 aaPredicted RBP2.94□□□□□ -1.94
IFT43-207ENST00000554233 HBBP68871 147 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 C4orf26Q17RF5 130 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 COA6Q5JTJ3 125 aaKnown RBP2.94□□□□□ -1.94
IFT43-207ENST00000554233 OR5A1Q8NGJ0 315 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 SEC11CQ9BY50 192 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 MAP1LC3AQ9H492 121 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 CDC42SE2Q9NRR3 84 aa2.94□□□□□ -1.94
IFT43-207ENST00000554233 LRP1Q07954 4544 aaKnown RBP2.93□□□□□ -1.94
IFT43-207ENST00000554233 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 GVQW2A0A096LPI5 108 aaPredicted RBP2.93□□□□□ -1.94
IFT43-207ENST00000554233 TMEM218A2RU14 115 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 C7orf77A4D0Y5 90 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 UBE2L6O14933 153 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 MT-ND4LP03901 98 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 FUSP35637 526 aaKnown RBP eCLIP2.93□□□□□ -1.94
IFT43-207ENST00000554233 MRPS36P82909 103 aaKnown RBP2.93□□□□□ -1.94
IFT43-207ENST00000554233 SMAGPQ0VAQ4 97 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 SDIM1Q6ZPB5 146 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 C15orf56Q8N910 161 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 CHAC1Q9BUX1 264 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 SMIM2Q9BVW6 85 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 CARHSP1Q9Y2V2 147 aaKnown RBP2.93□□□□□ -1.94
IFT43-207ENST00000554233 UBE2D4Q9Y2X8 147 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 HERC1Q15751 4861 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
IFT43-207ENST00000554233 LINC00959A0A1B0GUT2 108 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 LINC01546A6NGU7 62 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 D6R8Y8 96 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 LECT2O14960 151 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 NPYP01303 97 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 CKS2P33552 79 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 CXCL6P80162 114 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 LINC00173Q6ZV60 143 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 KRTAP7-1Q8IUC3 87 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 ORMDL3Q8N138 153 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 ZNF664Q8N3J9 261 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 BTF3L4Q96K17 158 aa2.92□□□□□ -1.94
IFT43-207ENST00000554233 IGLV10-54A0A075B6I4 117 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.91□□□□□ -1.94
IFT43-207ENST00000554233 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.91□□□□□ -1.94
IFT43-207ENST00000554233 A0A0J9YXV3 536 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 IGKV2-29A2NJV5 120 aaPredicted RBP2.91□□□□□ -1.94
IFT43-207ENST00000554233 C1orf196B1AJZ1 125 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 HLA-DQA1P01909 254 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 CHTF8P0CG12 524 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 PSMB2P49721 201 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 Q5VSD8 79 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 AMMECR1LQ6DCA0 310 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 MRPL54Q6P161 138 aaKnown RBP2.91□□□□□ -1.94
IFT43-207ENST00000554233 TMEM136Q6ZRR5 245 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 SCXQ7RTU7 201 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 CIRBP-AS1Q8TBR5 109 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 SPANXA1Q9NS26 97 aa2.91□□□□□ -1.94
IFT43-207ENST00000554233 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.9□□□□□ -1.95
IFT43-207ENST00000554233 IGHV1-58A0A0C4DH39 117 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 LOC105371267A0A1B0GV96 52 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 PSPHP1O15172 72 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 NDUFS5O43920 106 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 RHEBQ15382 184 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 CLPSL2Q6UWE3 100 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 Q8N8P6 123 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 SPACA4Q8TDM5 124 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 TMEM101Q96IK0 257 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 PRELID3AQ96N28 172 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 AMELXQ99217 191 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 GNB1LQ9BYB4 327 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 PLAC8Q9NZF1 115 aa2.9□□□□□ -1.95
IFT43-207ENST00000554233 IGHV3-64A0A075B6Q5 118 aa2.89□□□□□ -1.95
IFT43-207ENST00000554233 LINC01549A6NIU2 74 aa2.89□□□□□ -1.95
IFT43-207ENST00000554233 IGIPA6NJ69 53 aa2.89□□□□□ -1.95
IFT43-207ENST00000554233 PANO1I0J062 215 aa2.89□□□□□ -1.95
IFT43-207ENST00000554233 SERF1AO75920 110 aa2.89□□□□□ -1.95
IFT43-207ENST00000554233 FCER1GP30273 86 aa2.89□□□□□ -1.95
IFT43-207ENST00000554233 HERVK_113P61574 105 aa2.89□□□□□ -1.95
IFT43-207ENST00000554233 RPL39P62891 51 aaKnown RBP2.89□□□□□ -1.95
IFT43-207ENST00000554233 S100A12P80511 92 aa2.89□□□□□ -1.95
IFT43-207ENST00000554233 SS18Q15532 418 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms