RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
XRCC3-206ENST00000554170 PANO1I0J062 215 aa8.17□□□□□ -1.1
XRCC3-206ENST00000554170 CKS1BP61024 79 aa8.17□□□□□ -1.1
XRCC3-206ENST00000554170 KIAA0087Q14695 138 aa8.17□□□□□ -1.1
XRCC3-206ENST00000554170 FAM19A2Q8N3H0 131 aa8.17□□□□□ -1.1
XRCC3-206ENST00000554170 SPACA4Q8TDM5 124 aa8.17□□□□□ -1.1
XRCC3-206ENST00000554170 IFI27L1Q96BM0 104 aa8.17□□□□□ -1.1
XRCC3-206ENST00000554170 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
XRCC3-206ENST00000554170 A0A096LNI7 61 aa8.16□□□□□ -1.1
XRCC3-206ENST00000554170 SERF1AO75920 110 aa8.16□□□□□ -1.1
XRCC3-206ENST00000554170 IGLC3P0DOY3 106 aa8.16□□□□□ -1.1
XRCC3-206ENST00000554170 GAGE2BQ13066 116 aa8.16□□□□□ -1.1
XRCC3-206ENST00000554170 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
XRCC3-206ENST00000554170 Q8IZM0 81 aa8.16□□□□□ -1.1
XRCC3-206ENST00000554170 A0A087WYN8 130 aa8.15□□□□□ -1.1
XRCC3-206ENST00000554170 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.1
XRCC3-206ENST00000554170 STPG4Q8N801 248 aa8.15□□□□□ -1.1
XRCC3-206ENST00000554170 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
XRCC3-206ENST00000554170 TRAV12-1A0A0B4J245 112 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 TRBV30A0A0K0K1B3 111 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 SMIM1B2RUZ4 78 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 PTTG1IPP53801 180 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 FAT3Q8TDW7 4589 aa8.14□□□□□ -1.11
XRCC3-206ENST00000554170 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
XRCC3-206ENST00000554170 CXCL5P42830 114 aa8.13□□□□□ -1.11
XRCC3-206ENST00000554170 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
XRCC3-206ENST00000554170 PLAC8Q9NZF1 115 aa8.13□□□□□ -1.11
XRCC3-206ENST00000554170 HSPB8Q9UJY1 196 aa8.13□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BKO60814 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 ATP6V1G1O75348 118 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BJP06899 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BOP23527 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BBP33778 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BDP58876 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 LINC00310P59036 64 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BCP62807 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST2H2BEQ16778 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.12□□□□□ -1.11
XRCC3-206ENST00000554170 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BHQ93079 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BNQ99877 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 HIST1H2BMQ99879 126 aa8.12□□□□□ -1.11
XRCC3-206ENST00000554170 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
XRCC3-206ENST00000554170 C11orf86A6NJI1 115 aa8.11□□□□□ -1.11
XRCC3-206ENST00000554170 F8VRH5 84 aa8.11□□□□□ -1.11
XRCC3-206ENST00000554170 NUPR1O60356 82 aa8.11□□□□□ -1.11
XRCC3-206ENST00000554170 FABP4P15090 132 aa8.11□□□□□ -1.11
XRCC3-206ENST00000554170 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
XRCC3-206ENST00000554170 H0Y8G0 127 aa8.1□□□□□ -1.11
XRCC3-206ENST00000554170 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
XRCC3-206ENST00000554170 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.11
XRCC3-206ENST00000554170 GAGE2EQ4V326 116 aa8.09□□□□□ -1.11
XRCC3-206ENST00000554170 Q6ZRP5 223 aa8.09□□□□□ -1.11
XRCC3-206ENST00000554170 GAGE2DQ9UEU5 116 aa8.09□□□□□ -1.11
XRCC3-206ENST00000554170 HNRNPA3P51991 378 aaKnown RBP8.08□□□□□ -1.12
XRCC3-206ENST00000554170 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
XRCC3-206ENST00000554170 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
XRCC3-206ENST00000554170 MAP1LC3CQ9BXW4 147 aa8.07□□□□□ -1.12
XRCC3-206ENST00000554170 ODF1Q14990 250 aa8.06□□□□□ -1.12
XRCC3-206ENST00000554170 A0A1W2PNN7 141 aa8.05□□□□□ -1.12
XRCC3-206ENST00000554170 TMEM223A0PJW6 202 aa8.05□□□□□ -1.12
XRCC3-206ENST00000554170 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
XRCC3-206ENST00000554170 SFTA2Q6UW10 78 aa8.05□□□□□ -1.12
XRCC3-206ENST00000554170 PLNP26678 52 aa8.04□□□□□ -1.12
XRCC3-206ENST00000554170 DPM2O94777 84 aa8.03□□□□□ -1.12
XRCC3-206ENST00000554170 COA6Q5JTJ3 125 aaKnown RBP8.03□□□□□ -1.12
XRCC3-206ENST00000554170 IGKCP01834 107 aa8.02□□□□□ -1.13
XRCC3-206ENST00000554170 FAM19A5Q7Z5A7 132 aaPredicted RBP8.02□□□□□ -1.13
XRCC3-206ENST00000554170 FAM168BA1KXE4 195 aa8.01□□□□□ -1.13
XRCC3-206ENST00000554170 HERVK_113P61574 105 aa8.01□□□□□ -1.13
XRCC3-206ENST00000554170 C9orf129Q5T035 196 aaKnown RBP8.01□□□□□ -1.13
XRCC3-206ENST00000554170 PMCHL2Q9BQD1 86 aa8.01□□□□□ -1.13
XRCC3-206ENST00000554170 SYS1-DBNDD2H3BUS1 97 aa8□□□□□ -1.13
XRCC3-206ENST00000554170 PFN2P35080 140 aa8□□□□□ -1.13
XRCC3-206ENST00000554170 PHF5AQ7RTV0 110 aaKnown RBP8□□□□□ -1.13
XRCC3-206ENST00000554170 ZNF625Q96I27 306 aaPredicted RBP8□□□□□ -1.13
XRCC3-206ENST00000554170 XAGE1AQ9HD64 81 aa8□□□□□ -1.13
XRCC3-206ENST00000554170 ERG28Q9UKR5 140 aa8□□□□□ -1.13
XRCC3-206ENST00000554170 RNF213Q63HN8 5207 aa8□□□□□ -1.13
XRCC3-206ENST00000554170 COX17Q14061 63 aa7.99□□□□□ -1.13
XRCC3-206ENST00000554170 PET117Q6UWS5 81 aa7.99□□□□□ -1.13
XRCC3-206ENST00000554170 M0QXV9 152 aa7.98□□□□□ -1.13
XRCC3-206ENST00000554170 PLEKHB2Q96CS7 222 aa7.98□□□□□ -1.13
XRCC3-206ENST00000554170 LRP2P98164 4655 aa7.97□□□□□ -1.13
XRCC3-206ENST00000554170 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
XRCC3-206ENST00000554170 LEPROTO15243 131 aa7.97□□□□□ -1.13
XRCC3-206ENST00000554170 HERV-K104P63124 156 aa7.97□□□□□ -1.13
XRCC3-206ENST00000554170 UBE2BP63146 152 aa7.97□□□□□ -1.13
XRCC3-206ENST00000554170 PRR3P79522 188 aaKnown RBP7.97□□□□□ -1.13
XRCC3-206ENST00000554170 LINC00587B1AMM8 73 aa7.96□□□□□ -1.14
XRCC3-206ENST00000554170 S100A6P06703 90 aa7.96□□□□□ -1.14
XRCC3-206ENST00000554170 C3orf79P0CE67 100 aa7.96□□□□□ -1.14
XRCC3-206ENST00000554170 LINC00158P58513 81 aa7.96□□□□□ -1.14
XRCC3-206ENST00000554170 KRTDAPP60985 99 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms