RNA–Protein interactions for RNA: ENST00000553906.1

TRAV37-201, Transcript of T cell receptor alpha variable 37 (pseudogene), humanhuman

BASIC

Gene TRAV37, Length 342 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV37-201ENST00000553906 Q8N6K4 173 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 C14orf178Q8N769 122 aaPredicted RBP2.38□□□□□ -2.03
TRAV37-201ENST00000553906 LINC00474Q9P2X8 69 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 NBEAL2Q6ZNJ1 2754 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.37□□□□□ -2.03
TRAV37-201ENST00000553906 TET2Q6N021 2002 aaPredicted RBP2.37□□□□□ -2.03
TRAV37-201ENST00000553906 A0A087WVE0 104 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 LOC110117498A0A087WWA1 95 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 TRAV21A0A0B4J279 112 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 C8orf87E5RJ46 101 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 E7EUB6 86 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 CGB3P0DN86 165 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 CGB7P0DN87 165 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 ELOF1P60002 83 aaKnown RBP2.37□□□□□ -2.03
TRAV37-201ENST00000553906 WT1-ASQ06250 92 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 KIAA0087Q14695 138 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 DEFB114Q30KQ6 69 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 LINC00308Q8TCZ7 52 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 DEFB126Q9BYW3 111 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 OCR1Q9BZK8 76 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 ARFGEF3Q5TH69 2177 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 TNCP24821 2201 aa2.37□□□□□ -2.03
TRAV37-201ENST00000553906 CNTRLQ7Z7A1 2325 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 SEC16AO15027 2179 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 IGKV1D-17A0A075B6S4 117 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 TRBV6-8A0A0A6YYG3 113 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 IGHV3-43A0A0B4J1X8 118 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 TRAV12-3A0A0B4J271 114 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 IGHV7-4-1A0A0J9YVY3 117 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 A0A1B0GW54 56 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 DEFB108AA8MXU0 73 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 SRRM5B3KS81 715 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 K7EMT4 169 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 K7EQG2 157 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 TRGV3P03979 118 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 CTSGP08311 255 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 IGHV3-43DP0DP04 118 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 NREPQ16612 68 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 DEFB110Q30KQ9 67 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 FAM74A4Q5TZK3 123 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 ENHOQ6UWT2 76 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 C17orf82Q86X59 251 aaPredicted RBP2.36□□□□□ -2.03
TRAV37-201ENST00000553906 LINC00269Q8N2A0 174 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 Q8N377 158 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 DEFB119Q8N690 84 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 C20orf203Q8NBC4 194 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 LINC00167Q96N53 147 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 C14orf132Q9NPU4 83 aa2.36□□□□□ -2.03
TRAV37-201ENST00000553906 RPL37AP8A6NKH3 93 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 A8MUN3 132 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 I3L2K1 104 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 IGKV1-17P01599 117 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 IGHV3-9P01782 118 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 CLEC19AQ6UXS0 136 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 UNQ9165/PRO28630Q6UXU0 137 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 FAM19A3Q7Z5A8 133 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.35□□□□□ -2.03
TRAV37-201ENST00000553906 RMI2Q96E14 147 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 C22orf24Q9Y442 160 aa2.35□□□□□ -2.03
TRAV37-201ENST00000553906 FREM1Q5H8C1 2179 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 IGKV2-40A0A087WW87 121 aaPredicted RBP2.34□□□□□ -2.03
TRAV37-201ENST00000553906 TRAV22A0A0B4J277 110 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 IGKV3D-20A0A0C4DH25 116 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 A0A1W2PPR1 153 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 BPY2O14599 106 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 IGKV2D-40P01614 121 aaPredicted RBP2.34□□□□□ -2.03
TRAV37-201ENST00000553906 IGKV1-16P04430 117 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 MGPP08493 103 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 MP68P56378 58 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
TRAV37-201ENST00000553906 SYCNQ0VAF6 134 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 C17orf58Q2M2W7 97 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 C9orf66Q5T8R8 295 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 SOSTDC1Q6X4U4 206 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 GPHB5Q86YW7 130 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 CCL4L1Q8NHW4 92 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 CCL17Q92583 94 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 CDC42SE1Q9NRR8 79 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 CCL26Q9Y258 94 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 SNURFQ9Y675 71 aa2.34□□□□□ -2.03
TRAV37-201ENST00000553906 DSCAMO60469 2012 aa2.34□□□□□ -2.04
TRAV37-201ENST00000553906 ABCA4P78363 2273 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 PKDREJQ9NTG1 2253 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 IGHV3-15A0A0B4J1V0 119 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 A0A0J9YXV3 536 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 A6NN06 94 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 H3BPC8 53 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 BUB1B-PAK6H3BSN5 160 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 LY6HO94772 140 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 LHBP01229 141 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 IGLV2-23P01705 113 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 IGLV3-19P01714 112 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 PRM2P04554 102 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 MIR7-3HGQ8N6C7 128 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 ZNRF1Q8ND25 227 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 MUC7Q8TAX7 377 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 ZNF625Q96I27 306 aaPredicted RBP2.33□□□□□ -2.04
TRAV37-201ENST00000553906 BPESC1Q9GZL8 116 aa2.33□□□□□ -2.04
TRAV37-201ENST00000553906 KIF25-AS1Q9Y6Z4 181 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms