RNA–Protein interactions for RNA: ENST00000553898.1

PCNX4-207, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-207ENST00000553898 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
PCNX4-207ENST00000553898 MRPL35Q9NZE8 188 aaKnown RBP6.34□□□□□ -1.39
PCNX4-207ENST00000553898 TRBV30A0A0K0K1B3 111 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 SMIM1B2RUZ4 78 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 EPM2AB3EWF7 344 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 F8VRH5 84 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 CHTF8P0CG12 524 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 XGP55808 180 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 RNF151Q2KHN1 245 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 C2orf82Q6UX34 121 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 Q6ZSA8 131 aa6.33□□□□□ -1.4
PCNX4-207ENST00000553898 DNAH11Q96DT5 4516 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 IGLV5-45A0A087WSX0 123 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 A0A096LNI7 61 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 C11orf86A6NJI1 115 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 S100A6P06703 90 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 ZNF22P17026 224 aaPredicted RBP6.32□□□□□ -1.4
PCNX4-207ENST00000553898 PLNP26678 52 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 Q8N1X5 172 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 STPG4Q8N801 248 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 CIRBP-AS1Q8TBR5 109 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.32□□□□□ -1.4
PCNX4-207ENST00000553898 HERC2O95714 4834 aa6.32□□□□□ -1.4
PCNX4-207ENST00000553898 NUPR1O60356 82 aa6.31□□□□□ -1.4
PCNX4-207ENST00000553898 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
PCNX4-207ENST00000553898 LINC00310P59036 64 aa6.31□□□□□ -1.4
PCNX4-207ENST00000553898 HERVK_113P61574 105 aa6.31□□□□□ -1.4
PCNX4-207ENST00000553898 GAGE2EQ4V326 116 aa6.31□□□□□ -1.4
PCNX4-207ENST00000553898 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
PCNX4-207ENST00000553898 C7orf33Q8WU49 177 aa6.31□□□□□ -1.4
PCNX4-207ENST00000553898 GAGE2DQ9UEU5 116 aa6.31□□□□□ -1.4
PCNX4-207ENST00000553898 A0A087WYN8 130 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 DPM2O94777 84 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 S100A2P29034 98 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 PTTG1IPP53801 180 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 KIAA0087Q14695 138 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 C10orf25Q5T742 122 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 Q5VSD8 79 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
PCNX4-207ENST00000553898 DYNC1H1Q14204 4646 aaKnown RBP6.3□□□□□ -1.4
PCNX4-207ENST00000553898 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
PCNX4-207ENST00000553898 C20orf202A1L168 122 aa6.28□□□□□ -1.4
PCNX4-207ENST00000553898 PANO1I0J062 215 aa6.28□□□□□ -1.4
PCNX4-207ENST00000553898 IGKCP01834 107 aa6.28□□□□□ -1.4
PCNX4-207ENST00000553898 KRTDAPP60985 99 aa6.28□□□□□ -1.4
PCNX4-207ENST00000553898 ODF1Q14990 250 aa6.28□□□□□ -1.4
PCNX4-207ENST00000553898 C9orf116Q5BN46 136 aaPredicted RBP6.28□□□□□ -1.4
PCNX4-207ENST00000553898 PMCHL2Q9BQD1 86 aa6.28□□□□□ -1.4
PCNX4-207ENST00000553898 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
PCNX4-207ENST00000553898 CIRBPQ14011 172 aaKnown RBP6.27□□□□□ -1.41
PCNX4-207ENST00000553898 PLAC8Q9NZF1 115 aa6.27□□□□□ -1.41
PCNX4-207ENST00000553898 IGLV5-39A0A0G2JS06 123 aa6.26□□□□□ -1.41
PCNX4-207ENST00000553898 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
PCNX4-207ENST00000553898 SYS1-DBNDD2H3BUS1 97 aa6.26□□□□□ -1.41
PCNX4-207ENST00000553898 GHRHP01286 108 aa6.26□□□□□ -1.41
PCNX4-207ENST00000553898 TLX1NBP0CAT3 122 aa6.26□□□□□ -1.41
PCNX4-207ENST00000553898 PFN2P35080 140 aa6.26□□□□□ -1.41
PCNX4-207ENST00000553898 COA6Q5JTJ3 125 aaKnown RBP6.26□□□□□ -1.41
PCNX4-207ENST00000553898 Q6ZRP5 223 aa6.26□□□□□ -1.41
PCNX4-207ENST00000553898 FAM19A5Q7Z5A7 132 aaPredicted RBP6.26□□□□□ -1.41
PCNX4-207ENST00000553898 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
PCNX4-207ENST00000553898 LGALS3P17931 250 aaKnown RBP6.25□□□□□ -1.41
PCNX4-207ENST00000553898 MEIG1Q5JSS6 88 aa6.25□□□□□ -1.41
PCNX4-207ENST00000553898 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
PCNX4-207ENST00000553898 PLEKHB2Q96CS7 222 aa6.25□□□□□ -1.41
PCNX4-207ENST00000553898 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
PCNX4-207ENST00000553898 DNAH5Q8TE73 4624 aa6.24□□□□□ -1.41
PCNX4-207ENST00000553898 HSPG2P98160 4391 aa6.24□□□□□ -1.41
PCNX4-207ENST00000553898 MYMXA0A1B0GTQ4 84 aa6.24□□□□□ -1.41
PCNX4-207ENST00000553898 AKR1D1P51857 326 aa6.24□□□□□ -1.41
PCNX4-207ENST00000553898 LINC00158P58513 81 aa6.24□□□□□ -1.41
PCNX4-207ENST00000553898 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
PCNX4-207ENST00000553898 ERG28Q9UKR5 140 aa6.24□□□□□ -1.41
PCNX4-207ENST00000553898 PCLOQ9Y6V0 5065 aa6.24□□□□□ -1.41
PCNX4-207ENST00000553898 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
PCNX4-207ENST00000553898 LINC00587B1AMM8 73 aa6.23□□□□□ -1.41
PCNX4-207ENST00000553898 LEPROTO15243 131 aa6.23□□□□□ -1.41
PCNX4-207ENST00000553898 C3orf79P0CE67 100 aa6.23□□□□□ -1.41
PCNX4-207ENST00000553898 INAFM2P0DMQ5 153 aa6.23□□□□□ -1.41
PCNX4-207ENST00000553898 HERV-K104P63124 156 aa6.23□□□□□ -1.41
PCNX4-207ENST00000553898 UBE2BP63146 152 aa6.23□□□□□ -1.41
PCNX4-207ENST00000553898 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
PCNX4-207ENST00000553898 M0QXV9 152 aa6.22□□□□□ -1.41
PCNX4-207ENST00000553898 COX17Q14061 63 aa6.22□□□□□ -1.41
PCNX4-207ENST00000553898 NKAPP1Q8N9T2 125 aa6.22□□□□□ -1.41
PCNX4-207ENST00000553898 RYR1P21817 5038 aa6.22□□□□□ -1.41
PCNX4-207ENST00000553898 A0A0U1RRA0 63 aa6.21□□□□□ -1.42
PCNX4-207ENST00000553898 A0A1W2PNN7 141 aa6.21□□□□□ -1.42
PCNX4-207ENST00000553898 J3QQQ9 107 aa6.21□□□□□ -1.42
PCNX4-207ENST00000553898 NMUP48645 174 aa6.21□□□□□ -1.42
PCNX4-207ENST00000553898 LINC01545Q5VT33 79 aa6.21□□□□□ -1.42
PCNX4-207ENST00000553898 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
PCNX4-207ENST00000553898 FAM168BA1KXE4 195 aa6.2□□□□□ -1.42
PCNX4-207ENST00000553898 LBHQ53QV2 105 aaPredicted RBP6.2□□□□□ -1.42
PCNX4-207ENST00000553898 PHF5AQ7RTV0 110 aaKnown RBP6.2□□□□□ -1.42
PCNX4-207ENST00000553898 HSBP1L1C9JCN9 74 aa6.19□□□□□ -1.42
PCNX4-207ENST00000553898 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
PCNX4-207ENST00000553898 SNRPEP62304 92 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms