RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 AKAP14Q86UN6 197 aa10.34□□□□□ -0.75
SYNE2-211ENST00000553801 LAMTOR2Q9Y2Q5 125 aa10.34□□□□□ -0.75
SYNE2-211ENST00000553801 LOC389332A0A1B0GUA5 103 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 SEC11AP67812 179 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 TPRXLQ17RH7 258 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 LINC00173Q6ZV60 143 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 LINC00304Q8N9R0 145 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 LINC00167Q96N53 147 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 MAP1LC3AQ9H492 121 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 ANAPC11Q9NYG5 84 aa10.33□□□□□ -0.76
SYNE2-211ENST00000553801 RPL37AP8A6NKH3 93 aa10.32□□□□□ -0.76
SYNE2-211ENST00000553801 CXCL5P42830 114 aa10.32□□□□□ -0.76
SYNE2-211ENST00000553801 HERVK_113P63121 156 aa10.32□□□□□ -0.76
SYNE2-211ENST00000553801 FAM229BQ4G0N7 80 aa10.32□□□□□ -0.76
SYNE2-211ENST00000553801 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
SYNE2-211ENST00000553801 MUC17Q685J3 4493 aa10.31□□□□□ -0.76
SYNE2-211ENST00000553801 UBE2AP49459 152 aa10.31□□□□□ -0.76
SYNE2-211ENST00000553801 KRTAP13-2Q52LG2 175 aa10.31□□□□□ -0.76
SYNE2-211ENST00000553801 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
SYNE2-211ENST00000553801 CTAG1AP78358 180 aa10.3□□□□□ -0.76
SYNE2-211ENST00000553801 ORMDL2Q53FV1 153 aa10.3□□□□□ -0.76
SYNE2-211ENST00000553801 PAPPA-AS1Q5QFB9 102 aa10.3□□□□□ -0.76
SYNE2-211ENST00000553801 Q8N8P6 123 aa10.3□□□□□ -0.76
SYNE2-211ENST00000553801 GEMIN7Q9H840 131 aaKnown RBP10.3□□□□□ -0.76
SYNE2-211ENST00000553801 C9JQL5 133 aa10.29□□□□□ -0.76
SYNE2-211ENST00000553801 PEA15Q15121 130 aa10.29□□□□□ -0.76
SYNE2-211ENST00000553801 CDKN2A-AS1Q9UH64 79 aa10.29□□□□□ -0.76
SYNE2-211ENST00000553801 IGKV2D-26A0A0A0MRZ7 120 aa10.28□□□□□ -0.76
SYNE2-211ENST00000553801 GAGE10A6NGK3 116 aa10.28□□□□□ -0.76
SYNE2-211ENST00000553801 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
SYNE2-211ENST00000553801 K7EMI3 77 aa10.27□□□□□ -0.77
SYNE2-211ENST00000553801 KRTAP13-1Q8IUC0 172 aa10.27□□□□□ -0.77
SYNE2-211ENST00000553801 G0S2P27469 103 aa10.26□□□□□ -0.77
SYNE2-211ENST00000553801 LCE2DQ5TA82 110 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-211ENST00000553801 NKAPP1Q8N9T2 125 aa10.26□□□□□ -0.77
SYNE2-211ENST00000553801 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
SYNE2-211ENST00000553801 SRSF3P84103 164 aaKnown RBP10.24□□□□□ -0.77
SYNE2-211ENST00000553801 PNRC1Q12796 327 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-211ENST00000553801 PDZD11Q5EBL8 140 aa10.23□□□□□ -0.77
SYNE2-211ENST00000553801 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
SYNE2-211ENST00000553801 TIMM17AQ99595 171 aa10.22□□□□□ -0.77
SYNE2-211ENST00000553801 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
SYNE2-211ENST00000553801 SMIM1B2RUZ4 78 aa10.21□□□□□ -0.77
SYNE2-211ENST00000553801 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
SYNE2-211ENST00000553801 RAB5BP61020 215 aa10.2□□□□□ -0.78
SYNE2-211ENST00000553801 IGKV2-28A0A075B6P5 120 aa10.19□□□□□ -0.78
SYNE2-211ENST00000553801 IGKV2D-28P01615 120 aa10.19□□□□□ -0.78
SYNE2-211ENST00000553801 TOMM6Q96B49 74 aa10.19□□□□□ -0.78
SYNE2-211ENST00000553801 hCG_2014768A0A024R1R8 64 aa10.18□□□□□ -0.78
SYNE2-211ENST00000553801 TINCRA0A1B0GVN0 87 aa10.18□□□□□ -0.78
SYNE2-211ENST00000553801 PRLHP81277 87 aa10.17□□□□□ -0.78
SYNE2-211ENST00000553801 SPAG11AQ6PDA7 123 aa10.17□□□□□ -0.78
SYNE2-211ENST00000553801 FAM19A1Q7Z5A9 133 aa10.17□□□□□ -0.78
SYNE2-211ENST00000553801 ERASQ7Z444 233 aa10.16□□□□□ -0.78
SYNE2-211ENST00000553801 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
SYNE2-211ENST00000553801 IGLV5-45A0A087WSX0 123 aa10.15□□□□□ -0.78
SYNE2-211ENST00000553801 SCO1O75880 301 aa10.14□□□□□ -0.79
SYNE2-211ENST00000553801 ATP5LO75964 103 aa10.14□□□□□ -0.79
SYNE2-211ENST00000553801 FP248Q71RG6 208 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-211ENST00000553801 LINC00337Q8N6G1 96 aa10.14□□□□□ -0.79
SYNE2-211ENST00000553801 ANAPC16Q96DE5 110 aa10.14□□□□□ -0.79
SYNE2-211ENST00000553801 GNB1LQ9BYB4 327 aa10.14□□□□□ -0.79
SYNE2-211ENST00000553801 TMEM126AQ9H061 195 aa10.14□□□□□ -0.79
SYNE2-211ENST00000553801 MT-ND4LP03901 98 aa10.13□□□□□ -0.79
SYNE2-211ENST00000553801 SPINK8P0C7L1 97 aa10.13□□□□□ -0.79
SYNE2-211ENST00000553801 LINC01547P58512 204 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-211ENST00000553801 C3orf22Q8N5N4 141 aa10.13□□□□□ -0.79
SYNE2-211ENST00000553801 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
SYNE2-211ENST00000553801 LINC01549A6NIU2 74 aa10.12□□□□□ -0.79
SYNE2-211ENST00000553801 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
SYNE2-211ENST00000553801 CBLN2Q8IUK8 224 aa10.12□□□□□ -0.79
SYNE2-211ENST00000553801 MRPL18Q9H0U6 180 aaKnown RBP10.12□□□□□ -0.79
SYNE2-211ENST00000553801 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
SYNE2-211ENST00000553801 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
SYNE2-211ENST00000553801 H3BRM9 83 aa10.1□□□□□ -0.79
SYNE2-211ENST00000553801 VPREB1P12018 145 aa10.1□□□□□ -0.79
SYNE2-211ENST00000553801 PFN2P35080 140 aa10.1□□□□□ -0.79
SYNE2-211ENST00000553801 CST9LQ9H4G1 147 aa10.1□□□□□ -0.79
SYNE2-211ENST00000553801 M0R378 163 aa10.09□□□□□ -0.79
SYNE2-211ENST00000553801 ADCYAP1P18509 176 aa10.09□□□□□ -0.79
SYNE2-211ENST00000553801 A0A1B0GVG6 124 aa10.08□□□□□ -0.8
SYNE2-211ENST00000553801 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
SYNE2-211ENST00000553801 PMVKQ15126 192 aa10.07□□□□□ -0.8
SYNE2-211ENST00000553801 NDUFA5Q16718 116 aa10.07□□□□□ -0.8
SYNE2-211ENST00000553801 HIGD2AQ9BW72 106 aa10.07□□□□□ -0.8
SYNE2-211ENST00000553801 SND1-IT1Q9HBX3 110 aa10.07□□□□□ -0.8
SYNE2-211ENST00000553801 ATP6V1G1O75348 118 aa10.06□□□□□ -0.8
SYNE2-211ENST00000553801 COX17Q14061 63 aa10.06□□□□□ -0.8
SYNE2-211ENST00000553801 KIAA1644Q3SXP7 199 aa10.05□□□□□ -0.8
SYNE2-211ENST00000553801 KRTAP13-3Q3SY46 172 aa10.05□□□□□ -0.8
SYNE2-211ENST00000553801 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
SYNE2-211ENST00000553801 S100A1P23297 94 aa10.04□□□□□ -0.8
SYNE2-211ENST00000553801 SEC61BP60468 96 aaKnown RBP10.04□□□□□ -0.8
SYNE2-211ENST00000553801 RAB14P61106 215 aa10.04□□□□□ -0.8
SYNE2-211ENST00000553801 SPRR4Q96PI1 79 aa10.04□□□□□ -0.8
SYNE2-211ENST00000553801 ZNF706Q9Y5V0 76 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-211ENST00000553801 IGLV5-39A0A0G2JS06 123 aa10.02□□□□□ -0.81
SYNE2-211ENST00000553801 LINC01546A6NGU7 62 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms