RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 FA2HQ7L5A8 372 aa7.53□□□□□ -1.2
CKAP4-202ENST00000552828 OPRPNQ99935 248 aaPredicted RBP7.53□□□□□ -1.2
CKAP4-202ENST00000552828 hDV102S1A0JD36 115 aa7.52□□□□□ -1.21
CKAP4-202ENST00000552828 LINC01546A6NGU7 62 aa7.52□□□□□ -1.21
CKAP4-202ENST00000552828 FAM104AQ969W3 186 aa7.52□□□□□ -1.21
CKAP4-202ENST00000552828 IGLV4-3A0A075B6K6 122 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 HSBP1L1C9JCN9 74 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 DLEU1O43261 78 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 SLPIP03973 132 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 NPSP0C0P6 89 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 ATOH7Q8N100 152 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 TMEM141Q96I45 108 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 PMCHL2Q9BQD1 86 aa7.51□□□□□ -1.21
CKAP4-202ENST00000552828 A0A087WYN8 130 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 LINC01549A6NIU2 74 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 IGIPA6NJ69 53 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 LINC00173Q6ZV60 143 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 C15orf56Q8N910 161 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 SPACA4Q8TDM5 124 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 TOMM6Q96B49 74 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 VCX2Q9H322 139 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
CKAP4-202ENST00000552828 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.49□□□□□ -1.21
CKAP4-202ENST00000552828 IGHV1-58A0A0C4DH39 117 aa7.49□□□□□ -1.21
CKAP4-202ENST00000552828 COX7A2LO14548 114 aa7.49□□□□□ -1.21
CKAP4-202ENST00000552828 MALP21145 153 aa7.49□□□□□ -1.21
CKAP4-202ENST00000552828 MAJINQ3KP22 176 aa7.49□□□□□ -1.21
CKAP4-202ENST00000552828 PAPPA-AS1Q5QFB9 102 aa7.49□□□□□ -1.21
CKAP4-202ENST00000552828 SLC25A34Q6PIV7 304 aa7.49□□□□□ -1.21
CKAP4-202ENST00000552828 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
CKAP4-202ENST00000552828 GVQW2A0A096LPI5 108 aaPredicted RBP7.48□□□□□ -1.21
CKAP4-202ENST00000552828 HIGD2BQ4VC39 106 aa7.48□□□□□ -1.21
CKAP4-202ENST00000552828 ERASQ7Z444 233 aa7.48□□□□□ -1.21
CKAP4-202ENST00000552828 STPG4Q8N801 248 aa7.48□□□□□ -1.21
CKAP4-202ENST00000552828 SCGB3A1Q96QR1 104 aa7.48□□□□□ -1.21
CKAP4-202ENST00000552828 TIMM17AQ99595 171 aa7.48□□□□□ -1.21
CKAP4-202ENST00000552828 A0A096LNJ9 63 aa7.47□□□□□ -1.21
CKAP4-202ENST00000552828 HBDP02042 147 aa7.47□□□□□ -1.21
CKAP4-202ENST00000552828 CHTF8P0CG12 524 aa7.47□□□□□ -1.21
CKAP4-202ENST00000552828 BATFQ16520 125 aa7.47□□□□□ -1.21
CKAP4-202ENST00000552828 C5orf38Q86SI9 138 aa7.47□□□□□ -1.21
CKAP4-202ENST00000552828 DPH3Q96FX2 82 aa7.47□□□□□ -1.21
CKAP4-202ENST00000552828 AMELXQ99217 191 aa7.47□□□□□ -1.21
CKAP4-202ENST00000552828 IGHV3OR16-9A0A0B4J2B5 98 aa7.46□□□□□ -1.22
CKAP4-202ENST00000552828 ZNF561-AS1K7EIQ3 104 aa7.46□□□□□ -1.22
CKAP4-202ENST00000552828 APOMO95445 188 aa7.46□□□□□ -1.22
CKAP4-202ENST00000552828 COX8AP10176 69 aa7.45□□□□□ -1.22
CKAP4-202ENST00000552828 UBE2D1P51668 147 aa7.45□□□□□ -1.22
CKAP4-202ENST00000552828 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
CKAP4-202ENST00000552828 ZC2HC1BQ5TFG8 222 aa7.45□□□□□ -1.22
CKAP4-202ENST00000552828 LINC01600Q96MT4 127 aa7.45□□□□□ -1.22
CKAP4-202ENST00000552828 HINT1P49773 126 aaPredicted RBP7.44□□□□□ -1.22
CKAP4-202ENST00000552828 SEC11AP67812 179 aa7.44□□□□□ -1.22
CKAP4-202ENST00000552828 C7orf33Q8WU49 177 aa7.44□□□□□ -1.22
CKAP4-202ENST00000552828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.43□□□□□ -1.22
CKAP4-202ENST00000552828 COX6A2Q02221 97 aa7.43□□□□□ -1.22
CKAP4-202ENST00000552828 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
CKAP4-202ENST00000552828 LINC00526Q96FQ7 95 aa7.43□□□□□ -1.22
CKAP4-202ENST00000552828 A0A087WZ39 114 aa7.42□□□□□ -1.22
CKAP4-202ENST00000552828 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
CKAP4-202ENST00000552828 BVES-AS1Q5T3Y7 98 aa7.42□□□□□ -1.22
CKAP4-202ENST00000552828 FAM19A3Q7Z5A8 133 aa7.42□□□□□ -1.22
CKAP4-202ENST00000552828 CST9LQ9H4G1 147 aa7.42□□□□□ -1.22
CKAP4-202ENST00000552828 GEMIN7Q9H840 131 aaKnown RBP7.42□□□□□ -1.22
CKAP4-202ENST00000552828 IGLV4-69A0A075B6H9 119 aa7.41□□□□□ -1.22
CKAP4-202ENST00000552828 HERVK_113P63121 156 aa7.41□□□□□ -1.22
CKAP4-202ENST00000552828 SPAG11BQ08648 103 aa7.41□□□□□ -1.22
CKAP4-202ENST00000552828 SYCNQ0VAF6 134 aa7.41□□□□□ -1.22
CKAP4-202ENST00000552828 PMVKQ15126 192 aa7.41□□□□□ -1.22
CKAP4-202ENST00000552828 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
CKAP4-202ENST00000552828 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
CKAP4-202ENST00000552828 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
CKAP4-202ENST00000552828 A0A0J9YXV3 536 aa7.4□□□□□ -1.22
CKAP4-202ENST00000552828 ATP5LO75964 103 aa7.4□□□□□ -1.22
CKAP4-202ENST00000552828 KRTAP10-8P60410 259 aa7.4□□□□□ -1.22
CKAP4-202ENST00000552828 UBE2V1Q13404 147 aa7.4□□□□□ -1.22
CKAP4-202ENST00000552828 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
CKAP4-202ENST00000552828 BOD1L2Q8IYS8 172 aa7.4□□□□□ -1.22
CKAP4-202ENST00000552828 CAMK2N2Q96S95 79 aa7.4□□□□□ -1.22
CKAP4-202ENST00000552828 PKIGQ9Y2B9 76 aa7.4□□□□□ -1.22
CKAP4-202ENST00000552828 TINCRA0A1B0GVN0 87 aa7.39□□□□□ -1.23
CKAP4-202ENST00000552828 F8WDY8 70 aa7.39□□□□□ -1.23
CKAP4-202ENST00000552828 H0Y8G0 127 aa7.39□□□□□ -1.23
CKAP4-202ENST00000552828 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
CKAP4-202ENST00000552828 TAX1BP3O14907 124 aa7.38□□□□□ -1.23
CKAP4-202ENST00000552828 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
CKAP4-202ENST00000552828 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
CKAP4-202ENST00000552828 LINC00474Q9P2X8 69 aa7.38□□□□□ -1.23
CKAP4-202ENST00000552828 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
CKAP4-202ENST00000552828 A0A096LNI7 61 aa7.37□□□□□ -1.23
CKAP4-202ENST00000552828 HSD52Q0P140 79 aa7.37□□□□□ -1.23
CKAP4-202ENST00000552828 SRSF9Q13242 221 aaKnown RBP eCLIP7.37□□□□□ -1.23
CKAP4-202ENST00000552828 ODF1Q14990 250 aa7.37□□□□□ -1.23
CKAP4-202ENST00000552828 NDUFA1O15239 70 aa7.36□□□□□ -1.23
CKAP4-202ENST00000552828 PRSS2P07478 247 aa7.36□□□□□ -1.23
CKAP4-202ENST00000552828 PTTG1IPP53801 180 aa7.36□□□□□ -1.23
CKAP4-202ENST00000552828 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
CKAP4-202ENST00000552828 HIGD1BQ9P298 99 aa7.36□□□□□ -1.23
CKAP4-202ENST00000552828 IGLV5-45A0A087WSX0 123 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms