RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 TENM4Q6N022 2769 aa7.19□□□□□ -1.26
RFX4-210ENST00000552773 A0A1B0GV72 72 aa7.19□□□□□ -1.26
RFX4-210ENST00000552773 KLK5Q9Y337 293 aaPredicted RBP7.19□□□□□ -1.26
RFX4-210ENST00000552773 PFN2P35080 140 aa7.19□□□□□ -1.26
RFX4-210ENST00000552773 CCL18P55774 89 aa7.19□□□□□ -1.26
RFX4-210ENST00000552773 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
RFX4-210ENST00000552773 C11orf68Q9H3H3 251 aaKnown RBP7.18□□□□□ -1.26
RFX4-210ENST00000552773 HELZ2Q9BYK8 2649 aaKnown RBP7.18□□□□□ -1.26
RFX4-210ENST00000552773 MTORP42345 2549 aa7.17□□□□□ -1.26
RFX4-210ENST00000552773 TMEM126AQ9H061 195 aa7.17□□□□□ -1.26
RFX4-210ENST00000552773 A0A096LPF7 62 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 TEX49A0A1B0GTD5 131 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 F8WDY8 70 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 H3BQ85 93 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 BAALC-AS2P0C853 105 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 C3orf56Q8N813 242 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 OR13C6PQ8NH95 151 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 PRR34Q9NV39 138 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 GHRHP01286 108 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 HTN3P15516 51 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 EGFEM1PQ0D2K5 195 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 Q6Q795 121 aa7.16□□□□□ -1.26
RFX4-210ENST00000552773 FASNP49327 2511 aaKnown RBP7.15□□□□□ -1.26
RFX4-210ENST00000552773 IGKV2-28A0A075B6P5 120 aa7.15□□□□□ -1.27
RFX4-210ENST00000552773 DEFB4AO15263 64 aa7.15□□□□□ -1.27
RFX4-210ENST00000552773 IGKV2D-28P01615 120 aa7.15□□□□□ -1.27
RFX4-210ENST00000552773 LINC00337Q8N6G1 96 aa7.15□□□□□ -1.27
RFX4-210ENST00000552773 SMIM11BQ8TCY0 68 aa7.15□□□□□ -1.27
RFX4-210ENST00000552773 GVQW2A0A096LPI5 108 aaPredicted RBP7.14□□□□□ -1.27
RFX4-210ENST00000552773 GAGE2BQ13066 116 aa7.14□□□□□ -1.27
RFX4-210ENST00000552773 GAGE2EQ4V326 116 aa7.14□□□□□ -1.27
RFX4-210ENST00000552773 GAGE2DQ9UEU5 116 aa7.14□□□□□ -1.27
RFX4-210ENST00000552773 CELA1Q9UNI1 258 aa7.14□□□□□ -1.27
RFX4-210ENST00000552773 A0A0J9YWU9 116 aa7.13□□□□□ -1.27
RFX4-210ENST00000552773 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
RFX4-210ENST00000552773 KIAA0087Q14695 138 aa7.13□□□□□ -1.27
RFX4-210ENST00000552773 CLPSL2Q6UWE3 100 aa7.13□□□□□ -1.27
RFX4-210ENST00000552773 LYPD5Q6UWN5 251 aa7.13□□□□□ -1.27
RFX4-210ENST00000552773 ITPR2Q14571 2701 aa7.13□□□□□ -1.27
RFX4-210ENST00000552773 NOTCH3Q9UM47 2321 aa7.13□□□□□ -1.27
RFX4-210ENST00000552773 XGP55808 180 aa7.12□□□□□ -1.27
RFX4-210ENST00000552773 SPATA3Q8NHX4 192 aa7.12□□□□□ -1.27
RFX4-210ENST00000552773 IMUPQ9GZP8 106 aa7.12□□□□□ -1.27
RFX4-210ENST00000552773 C2CD3Q4AC94 2353 aa7.11□□□□□ -1.27
RFX4-210ENST00000552773 ORMDL1Q9P0S3 153 aa7.11□□□□□ -1.27
RFX4-210ENST00000552773 KLK12Q9UKR0 248 aa7.11□□□□□ -1.27
RFX4-210ENST00000552773 ZNF469Q96JG9 3925 aaPredicted RBP7.11□□□□□ -1.27
RFX4-210ENST00000552773 JMJD7-PLA2G4BH0Y9G9 81 aa7.1□□□□□ -1.27
RFX4-210ENST00000552773 MT-ATP8P03928 68 aa7.1□□□□□ -1.27
RFX4-210ENST00000552773 TTC32Q5I0X7 151 aa7.1□□□□□ -1.27
RFX4-210ENST00000552773 S100A7L2Q5SY68 101 aa7.1□□□□□ -1.27
RFX4-210ENST00000552773 KPRPQ5T749 579 aaPredicted RBP7.1□□□□□ -1.27
RFX4-210ENST00000552773 SETXQ7Z333 2677 aaKnown RBP7.1□□□□□ -1.27
RFX4-210ENST00000552773 JMJD1CQ15652 2540 aa7.1□□□□□ -1.27
RFX4-210ENST00000552773 SETD2Q9BYW2 2564 aaPredicted RBP7.1□□□□□ -1.27
RFX4-210ENST00000552773 IGLV10-54A0A075B6I4 117 aa7.09□□□□□ -1.27
RFX4-210ENST00000552773 TMEM256-PLSCR3K7ERE1 68 aa7.09□□□□□ -1.27
RFX4-210ENST00000552773 NF1P21359 2839 aa7.09□□□□□ -1.27
RFX4-210ENST00000552773 ANK3Q12955 4377 aaKnown RBP7.09□□□□□ -1.27
RFX4-210ENST00000552773 ZNF561-AS1K7EIQ3 104 aa7.09□□□□□ -1.27
RFX4-210ENST00000552773 LINC00643Q86TS7 51 aa7.09□□□□□ -1.27
RFX4-210ENST00000552773 C15orf53Q8NAA6 179 aa7.09□□□□□ -1.27
RFX4-210ENST00000552773 AKAP9Q99996 3911 aa7.07□□□□□ -1.28
RFX4-210ENST00000552773 CYSRT1A8MQ03 144 aa7.07□□□□□ -1.28
RFX4-210ENST00000552773 C11orf45Q8TAV5 145 aa7.07□□□□□ -1.28
RFX4-210ENST00000552773 C2orf48Q96LS8 159 aa7.07□□□□□ -1.28
RFX4-210ENST00000552773 NOTCH2Q04721 2471 aa7.07□□□□□ -1.28
RFX4-210ENST00000552773 LECT2O14960 151 aa7.06□□□□□ -1.28
RFX4-210ENST00000552773 KRTAP24-1Q3LI83 254 aa7.06□□□□□ -1.28
RFX4-210ENST00000552773 ENHOQ6UWT2 76 aa7.06□□□□□ -1.28
RFX4-210ENST00000552773 FAM218AQ96MZ4 157 aa7.06□□□□□ -1.28
RFX4-210ENST00000552773 FN1P02751 2386 aaKnown RBP7.06□□□□□ -1.28
RFX4-210ENST00000552773 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
RFX4-210ENST00000552773 LINC00167Q96N53 147 aa7.06□□□□□ -1.28
RFX4-210ENST00000552773 C1orf43Q9BWL3 253 aa7.06□□□□□ -1.28
RFX4-210ENST00000552773 DEFB131BA0A096LNP1 70 aa7.05□□□□□ -1.28
RFX4-210ENST00000552773 TRBV7-7A0A0K0K1E9 115 aa7.05□□□□□ -1.28
RFX4-210ENST00000552773 KRTAP10-11P60412 298 aa7.05□□□□□ -1.28
RFX4-210ENST00000552773 Q8N814 137 aa7.05□□□□□ -1.28
RFX4-210ENST00000552773 ANAPC13Q9BS18 74 aa7.05□□□□□ -1.28
RFX4-210ENST00000552773 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
RFX4-210ENST00000552773 A0A087WYN8 130 aa7.04□□□□□ -1.28
RFX4-210ENST00000552773 RMI2Q96E14 147 aa7.04□□□□□ -1.28
RFX4-210ENST00000552773 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
RFX4-210ENST00000552773 CAMK2N2Q96S95 79 aa7.04□□□□□ -1.28
RFX4-210ENST00000552773 Q9HAA7 133 aa7.04□□□□□ -1.28
RFX4-210ENST00000552773 TRAV10A0A0B4J240 114 aa7.03□□□□□ -1.28
RFX4-210ENST00000552773 TRBV7-6A0A0J9YX20 115 aa7.03□□□□□ -1.28
RFX4-210ENST00000552773 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
RFX4-210ENST00000552773 Q6ZTC4 211 aa7.03□□□□□ -1.28
RFX4-210ENST00000552773 NBPF19A0A087WUL8 3843 aa7.03□□□□□ -1.28
RFX4-210ENST00000552773 PDE6GP18545 87 aa7.03□□□□□ -1.28
RFX4-210ENST00000552773 LCE2DQ5TA82 110 aaPredicted RBP7.03□□□□□ -1.28
RFX4-210ENST00000552773 GAGE2AQ6NT46 116 aa7.03□□□□□ -1.28
RFX4-210ENST00000552773 HECTD1Q9ULT8 2610 aa7.01□□□□□ -1.29
RFX4-210ENST00000552773 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
RFX4-210ENST00000552773 SDIM1Q6ZPB5 146 aa7.01□□□□□ -1.29
RFX4-210ENST00000552773 GCN1Q92616 2671 aaKnown RBP7.01□□□□□ -1.29
RFX4-210ENST00000552773 hADV29S1A0JD25 119 aa7□□□□□ -1.29
RFX4-210ENST00000552773 NCR3O14931 201 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms