RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 Q8IZM0 81 aa7.01□□□□□ -1.29
CACNB3-221ENST00000552022 DAND5Q8N907 189 aa7.01□□□□□ -1.29
CACNB3-221ENST00000552022 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
CACNB3-221ENST00000552022 IGKV2-28A0A075B6P5 120 aa7□□□□□ -1.29
CACNB3-221ENST00000552022 TEX46H3BTG2 121 aa7□□□□□ -1.29
CACNB3-221ENST00000552022 IGKV2D-28P01615 120 aa7□□□□□ -1.29
CACNB3-221ENST00000552022 Q6ZN92 141 aa7□□□□□ -1.29
CACNB3-221ENST00000552022 F8VRH5 84 aa6.99□□□□□ -1.29
CACNB3-221ENST00000552022 M0R2T5 61 aa6.99□□□□□ -1.29
CACNB3-221ENST00000552022 SCO1O75880 301 aa6.99□□□□□ -1.29
CACNB3-221ENST00000552022 FAM19A1Q7Z5A9 133 aa6.99□□□□□ -1.29
CACNB3-221ENST00000552022 AKAP14Q86UN6 197 aa6.99□□□□□ -1.29
CACNB3-221ENST00000552022 ALKBH7Q9BT30 221 aaPredicted RBP6.99□□□□□ -1.29
CACNB3-221ENST00000552022 KANTRA0A1W2PQU2 76 aa6.98□□□□□ -1.29
CACNB3-221ENST00000552022 IFI27P40305 119 aaPredicted RBP6.98□□□□□ -1.29
CACNB3-221ENST00000552022 FAM104BQ5XKR9 115 aa6.98□□□□□ -1.29
CACNB3-221ENST00000552022 Q8NBF4 154 aa6.98□□□□□ -1.29
CACNB3-221ENST00000552022 SMIM2Q9BVW6 85 aa6.98□□□□□ -1.29
CACNB3-221ENST00000552022 PYGO1Q9Y3Y4 419 aa6.98□□□□□ -1.29
CACNB3-221ENST00000552022 FCGBPQ9Y6R7 5405 aaPredicted RBP6.97□□□□□ -1.29
CACNB3-221ENST00000552022 LINC00862A6NCI5 91 aa6.97□□□□□ -1.29
CACNB3-221ENST00000552022 SPINK1P00995 79 aa6.97□□□□□ -1.29
CACNB3-221ENST00000552022 RIGQ13278 110 aa6.97□□□□□ -1.29
CACNB3-221ENST00000552022 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
CACNB3-221ENST00000552022 NKAPP1Q8N9T2 125 aa6.97□□□□□ -1.29
CACNB3-221ENST00000552022 TMEM141Q96I45 108 aa6.97□□□□□ -1.29
CACNB3-221ENST00000552022 HMSDA8MTL9 139 aa6.96□□□□□ -1.3
CACNB3-221ENST00000552022 TMEM238C9JI98 176 aa6.96□□□□□ -1.3
CACNB3-221ENST00000552022 CBLN2Q8IUK8 224 aa6.96□□□□□ -1.3
CACNB3-221ENST00000552022 EIF5A2Q9GZV4 153 aaKnown RBP6.96□□□□□ -1.3
CACNB3-221ENST00000552022 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
CACNB3-221ENST00000552022 IGLV8-61A0A075B6I0 122 aa6.95□□□□□ -1.3
CACNB3-221ENST00000552022 CKS2P33552 79 aa6.95□□□□□ -1.3
CACNB3-221ENST00000552022 PCOTHQ58A44 107 aa6.95□□□□□ -1.3
CACNB3-221ENST00000552022 TEX43Q6ZNM6 134 aa6.95□□□□□ -1.3
CACNB3-221ENST00000552022 TCTE3Q8IZS6 198 aa6.95□□□□□ -1.3
CACNB3-221ENST00000552022 SPRR4Q96PI1 79 aa6.95□□□□□ -1.3
CACNB3-221ENST00000552022 TAGLN2P37802 199 aaKnown RBP6.94□□□□□ -1.3
CACNB3-221ENST00000552022 Q8N377 158 aa6.94□□□□□ -1.3
CACNB3-221ENST00000552022 GNB1LQ9BYB4 327 aa6.94□□□□□ -1.3
CACNB3-221ENST00000552022 NDUFA12Q9UI09 145 aa6.94□□□□□ -1.3
CACNB3-221ENST00000552022 M0R378 163 aa6.93□□□□□ -1.3
CACNB3-221ENST00000552022 NPYP01303 97 aa6.93□□□□□ -1.3
CACNB3-221ENST00000552022 FAM19A3Q7Z5A8 133 aa6.92□□□□□ -1.3
CACNB3-221ENST00000552022 AMELXQ99217 191 aa6.92□□□□□ -1.3
CACNB3-221ENST00000552022 C2orf88Q9BSF0 95 aa6.92□□□□□ -1.3
CACNB3-221ENST00000552022 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
CACNB3-221ENST00000552022 OSTCQ9NRP0 149 aa6.92□□□□□ -1.3
CACNB3-221ENST00000552022 CDKN2A-AS1Q9UH64 79 aa6.92□□□□□ -1.3
CACNB3-221ENST00000552022 D6R8Y8 96 aa6.91□□□□□ -1.3
CACNB3-221ENST00000552022 TMEM250H0YL14 139 aa6.91□□□□□ -1.3
CACNB3-221ENST00000552022 RAB5BP61020 215 aa6.91□□□□□ -1.3
CACNB3-221ENST00000552022 LINC01551Q86U37 167 aa6.91□□□□□ -1.3
CACNB3-221ENST00000552022 V9GYV3 84 aa6.91□□□□□ -1.3
CACNB3-221ENST00000552022 RAB5AP20339 215 aa6.9□□□□□ -1.3
CACNB3-221ENST00000552022 CXCL5P42830 114 aa6.9□□□□□ -1.3
CACNB3-221ENST00000552022 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.3
CACNB3-221ENST00000552022 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
CACNB3-221ENST00000552022 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
CACNB3-221ENST00000552022 VCX2Q9H322 139 aa6.89□□□□□ -1.31
CACNB3-221ENST00000552022 CEBPGP53567 150 aa6.88□□□□□ -1.31
CACNB3-221ENST00000552022 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
CACNB3-221ENST00000552022 NAT8BQ9UHF3 227 aa6.88□□□□□ -1.31
CACNB3-221ENST00000552022 SLC25A20O43772 301 aa6.87□□□□□ -1.31
CACNB3-221ENST00000552022 VPREB1P12018 145 aa6.87□□□□□ -1.31
CACNB3-221ENST00000552022 HERVK_113P63121 156 aa6.87□□□□□ -1.31
CACNB3-221ENST00000552022 FAM74A3Q4VXF1 159 aa6.87□□□□□ -1.31
CACNB3-221ENST00000552022 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
CACNB3-221ENST00000552022 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
CACNB3-221ENST00000552022 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
CACNB3-221ENST00000552022 SMIM7Q9BQ49 75 aa6.85□□□□□ -1.31
CACNB3-221ENST00000552022 ZNF706Q9Y5V0 76 aaPredicted RBP6.85□□□□□ -1.31
CACNB3-221ENST00000552022 IGIPA6NJ69 53 aa6.84□□□□□ -1.31
CACNB3-221ENST00000552022 Q8NDZ9 215 aa6.84□□□□□ -1.31
CACNB3-221ENST00000552022 GEMIN7Q9H840 131 aaKnown RBP6.84□□□□□ -1.31
CACNB3-221ENST00000552022 CYSLTR1Q9Y271 337 aa6.84□□□□□ -1.31
CACNB3-221ENST00000552022 A0A1B0GW15 77 aa6.83□□□□□ -1.32
CACNB3-221ENST00000552022 SMIM27A0A1W2PRY6 76 aa6.83□□□□□ -1.32
CACNB3-221ENST00000552022 PPBPP02775 128 aa6.83□□□□□ -1.32
CACNB3-221ENST00000552022 SEC11AP67812 179 aa6.83□□□□□ -1.32
CACNB3-221ENST00000552022 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
CACNB3-221ENST00000552022 NPSP0C0P6 89 aa6.82□□□□□ -1.32
CACNB3-221ENST00000552022 IFITM2Q01629 132 aa6.82□□□□□ -1.32
CACNB3-221ENST00000552022 PDZD11Q5EBL8 140 aa6.82□□□□□ -1.32
CACNB3-221ENST00000552022 LOC389332A0A1B0GUA5 103 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 F8W036 122 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 GHRHP01286 108 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 PFN2P35080 140 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 MOBPQ13875 183 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 LINC00483Q53H64 154 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 TMEM136Q6ZRR5 245 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 ORMDL3Q8N138 153 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 PRELID3AQ96N28 172 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 SND1-IT1Q9HBX3 110 aa6.81□□□□□ -1.32
CACNB3-221ENST00000552022 RAB14P61106 215 aa6.8□□□□□ -1.32
CACNB3-221ENST00000552022 MRPL54Q6P161 138 aaKnown RBP6.8□□□□□ -1.32
CACNB3-221ENST00000552022 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
CACNB3-221ENST00000552022 SMCR5Q8TEV8 140 aa6.8□□□□□ -1.32
CACNB3-221ENST00000552022 A0A1B0GXF2 115 aa6.79□□□□□ -1.32
CACNB3-221ENST00000552022 C9orf92A6NGG3 77 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms