RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 M0R381 172 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 CXorf1O96002 111 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 RAB5CP51148 216 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 S100A10P60903 97 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 CTAG1AP78358 180 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 PMVKQ15126 192 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 FAM162BQ5T6X4 162 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 FAM74A4Q5TZK3 123 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 ZFP82Q8N141 532 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 OR5A1Q8NGJ0 315 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 CCDC32Q9BV29 185 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 SMIM3Q9BZL3 60 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 RNASE7Q9H1E1 156 aaKnown RBP1.27□□□□□ -2.21
CPSF6-207ENST00000551516 NIT2Q9NQR4 276 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 TMEM167BQ9NRX6 74 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 KCNIP2Q9NS61 270 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 TRBV25-1A0A075B6N4 114 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 TMSB15BA0A087X1C1 80 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 TRAV1-1A0A0B4J248 108 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 CTXND1A0A1B0GTU2 59 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 A0A1B0GW15 77 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 TMEM262E9PQX1 116 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 C17orf112F2Z3M2 114 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 APOMO95445 188 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 BCL2P10415 239 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 FGF6P10767 208 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 PVALBP20472 110 aaPredicted RBP1.26□□□□□ -2.21
CPSF6-207ENST00000551516 NKX2-5P52952 324 aaPredicted RBP1.26□□□□□ -2.21
CPSF6-207ENST00000551516 TMEM97Q5BJF2 176 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 FAM74A1Q5RGS3 127 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 RASL11AQ6T310 242 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 IGFL1Q6UW32 110 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 FAM231DQ6ZW35 169 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 MIR7-3HGQ8N6C7 128 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 ST20-AS1Q8NBB2 130 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 Q8NDZ9 215 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 CMTM2Q8TAZ6 248 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 RPL39LQ96EH5 51 aaKnown RBP1.26□□□□□ -2.21
CPSF6-207ENST00000551516 FMC1Q96HJ9 113 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 TCEAL7Q9BRU2 100 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 NKX6-2Q9C056 277 aaPredicted RBP1.26□□□□□ -2.21
CPSF6-207ENST00000551516 MRPL35Q9NZE8 188 aaKnown RBP1.26□□□□□ -2.21
CPSF6-207ENST00000551516 LINC00474Q9P2X8 69 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 C6orf48Q9UBA6 75 aa1.26□□□□□ -2.21
CPSF6-207ENST00000551516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.25□□□□□ -2.21
CPSF6-207ENST00000551516 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.25□□□□□ -2.21
CPSF6-207ENST00000551516 TRAV26-2A0A0B4J265 109 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 IGHV1-58A0A0C4DH39 117 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 IGKV2-29A2NJV5 120 aaPredicted RBP1.25□□□□□ -2.21
CPSF6-207ENST00000551516 CCL25O15444 150 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 NCR2O95944 276 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 TPT1P13693 172 aaKnown RBP1.25□□□□□ -2.21
CPSF6-207ENST00000551516 S100A4P26447 101 aaKnown RBP1.25□□□□□ -2.21
CPSF6-207ENST00000551516 S100A5P33763 92 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 UBE2G2P60604 165 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 PKIAP61925 76 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 TRIQKQ629K1 86 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 SPINT4Q6UDR6 99 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 LYZL1Q6UWQ5 148 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 UNQ6190/PRO20217Q6UXQ8 127 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 FER1L6-AS1Q8NA97 138 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 DIRC1Q969H9 104 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 CARD19Q96LW7 228 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 SMDT1Q9H4I9 107 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 UBE2D4Q9Y2X8 147 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 PHLDA3Q9Y5J5 127 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 URGCP-MRPS24S4R325 110 aa1.25□□□□□ -2.21
CPSF6-207ENST00000551516 TRBV24-1A0A075B6N3 115 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 LOC107984640A0A0U1RRK4 108 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 LOC389332A0A1B0GUA5 103 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 MAP1LC3B2A6NCE7 125 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 SDHAF1A6NFY7 115 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 CCDC160A6NGH7 325 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 A8MUU9 505 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 CRPP02741 224 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 ZNF25P17030 456 aaPredicted RBP1.24□□□□□ -2.21
CPSF6-207ENST00000551516 RPL35P42766 123 aaKnown RBP1.24□□□□□ -2.21
CPSF6-207ENST00000551516 XCL1P47992 114 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 DEFA3P59666 94 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 ZNF56Q15929 161 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 C1orf137Q5JT78 98 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 FA2HQ7L5A8 372 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 FAM19A3Q7Z5A8 133 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 BAGE2Q86Y30 109 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 SCGB1C1Q8TD33 95 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 SMIM12Q96EX1 92 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 FAM210AQ96ND0 272 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 TIMM21Q9BVV7 248 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 MAP1LC3BQ9GZQ8 125 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 DPH3P1Q9H4G8 78 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 ALG5Q9Y673 324 aa1.24□□□□□ -2.21
CPSF6-207ENST00000551516 HSBP1L1C9JCN9 74 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 F2Z2F3 143 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 IFNA7P01567 189 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 MRPS36P82909 103 aaKnown RBP1.23□□□□□ -2.21
CPSF6-207ENST00000551516 FAM229BQ4G0N7 80 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 FAM104BQ5XKR9 115 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 Q6ZUT4 128 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 FAM19A1Q7Z5A9 133 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 KCNRGQ8N5I3 272 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms