RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 C6orf48Q9UBA6 75 aa9.66□□□□□ -0.86
SMARCD1-211ENST00000551497 HSPB8Q9UJY1 196 aa9.66□□□□□ -0.86
SMARCD1-211ENST00000551497 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
SMARCD1-211ENST00000551497 RNF151Q2KHN1 245 aa9.65□□□□□ -0.86
SMARCD1-211ENST00000551497 COA6Q5JTJ3 125 aaKnown RBP9.65□□□□□ -0.86
SMARCD1-211ENST00000551497 Q8IZM0 81 aa9.65□□□□□ -0.86
SMARCD1-211ENST00000551497 KRTAP4-5Q9BYR2 181 aa9.65□□□□□ -0.86
SMARCD1-211ENST00000551497 APOBP04114 4563 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-211ENST00000551497 H3BRM9 83 aa9.64□□□□□ -0.87
SMARCD1-211ENST00000551497 CKS1BP61024 79 aa9.64□□□□□ -0.87
SMARCD1-211ENST00000551497 GAGE2BQ13066 116 aa9.64□□□□□ -0.87
SMARCD1-211ENST00000551497 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
SMARCD1-211ENST00000551497 Q8N1X5 172 aa9.64□□□□□ -0.87
SMARCD1-211ENST00000551497 LOC107984640A0A0U1RRK4 108 aa9.63□□□□□ -0.87
SMARCD1-211ENST00000551497 F8VRH5 84 aa9.63□□□□□ -0.87
SMARCD1-211ENST00000551497 ODF1Q14990 250 aa9.63□□□□□ -0.87
SMARCD1-211ENST00000551497 MAJINQ3KP22 176 aa9.63□□□□□ -0.87
SMARCD1-211ENST00000551497 C9orf116Q5BN46 136 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-211ENST00000551497 SPACA4Q8TDM5 124 aa9.63□□□□□ -0.87
SMARCD1-211ENST00000551497 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
SMARCD1-211ENST00000551497 HSPG2P98160 4391 aa9.62□□□□□ -0.87
SMARCD1-211ENST00000551497 A0A087WYN8 130 aa9.62□□□□□ -0.87
SMARCD1-211ENST00000551497 IGLV5-39A0A0G2JS06 123 aa9.61□□□□□ -0.87
SMARCD1-211ENST00000551497 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
SMARCD1-211ENST00000551497 PMCHL2Q9BQD1 86 aa9.61□□□□□ -0.87
SMARCD1-211ENST00000551497 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
SMARCD1-211ENST00000551497 RPL18AQ02543 176 aaKnown RBP9.6□□□□□ -0.87
SMARCD1-211ENST00000551497 MAP1LC3CQ9BXW4 147 aa9.6□□□□□ -0.87
SMARCD1-211ENST00000551497 DNAH8Q96JB1 4490 aa9.6□□□□□ -0.87
SMARCD1-211ENST00000551497 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
SMARCD1-211ENST00000551497 Q6ZRP5 223 aa9.59□□□□□ -0.87
SMARCD1-211ENST00000551497 STPG4Q8N801 248 aa9.59□□□□□ -0.87
SMARCD1-211ENST00000551497 PKIGQ9Y2B9 76 aa9.59□□□□□ -0.87
SMARCD1-211ENST00000551497 GAGE2EQ4V326 116 aa9.58□□□□□ -0.88
SMARCD1-211ENST00000551497 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
SMARCD1-211ENST00000551497 GAGE2DQ9UEU5 116 aa9.58□□□□□ -0.88
SMARCD1-211ENST00000551497 EPM2AB3EWF7 344 aa9.57□□□□□ -0.88
SMARCD1-211ENST00000551497 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
SMARCD1-211ENST00000551497 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
SMARCD1-211ENST00000551497 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
SMARCD1-211ENST00000551497 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
SMARCD1-211ENST00000551497 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
SMARCD1-211ENST00000551497 CXCL5P42830 114 aa9.56□□□□□ -0.88
SMARCD1-211ENST00000551497 Q5VSD8 79 aa9.56□□□□□ -0.88
SMARCD1-211ENST00000551497 NDUFC2-KCTD14E9PQ53 114 aa9.55□□□□□ -0.88
SMARCD1-211ENST00000551497 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
SMARCD1-211ENST00000551497 DPM2O94777 84 aa9.55□□□□□ -0.88
SMARCD1-211ENST00000551497 IGKCP01834 107 aa9.54□□□□□ -0.88
SMARCD1-211ENST00000551497 C3orf79P0CE67 100 aa9.54□□□□□ -0.88
SMARCD1-211ENST00000551497 PLNP26678 52 aa9.54□□□□□ -0.88
SMARCD1-211ENST00000551497 ABCA13Q86UQ4 5058 aa9.54□□□□□ -0.88
SMARCD1-211ENST00000551497 FAM168BA1KXE4 195 aa9.53□□□□□ -0.88
SMARCD1-211ENST00000551497 KRTDAPP60985 99 aa9.53□□□□□ -0.88
SMARCD1-211ENST00000551497 ZNF625Q96I27 306 aaPredicted RBP9.53□□□□□ -0.88
SMARCD1-211ENST00000551497 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-211ENST00000551497 PET117Q6UWS5 81 aa9.52□□□□□ -0.89
SMARCD1-211ENST00000551497 LINC01545Q5VT33 79 aa9.51□□□□□ -0.89
SMARCD1-211ENST00000551497 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
SMARCD1-211ENST00000551497 HIST3H2BBQ8N257 126 aa9.51□□□□□ -0.89
SMARCD1-211ENST00000551497 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
SMARCD1-211ENST00000551497 PFN2P35080 140 aa9.5□□□□□ -0.89
SMARCD1-211ENST00000551497 S100A6P06703 90 aa9.49□□□□□ -0.89
SMARCD1-211ENST00000551497 TSPEAR-AS2P59090 65 aa9.49□□□□□ -0.89
SMARCD1-211ENST00000551497 KRTAP10-4P60372 401 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-211ENST00000551497 LEPROTO15243 131 aa9.48□□□□□ -0.89
SMARCD1-211ENST00000551497 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
SMARCD1-211ENST00000551497 SNRPEP62304 92 aaKnown RBP9.48□□□□□ -0.89
SMARCD1-211ENST00000551497 FAM19A5Q7Z5A7 132 aaPredicted RBP9.48□□□□□ -0.89
SMARCD1-211ENST00000551497 HIST1H2BLQ99880 126 aa9.48□□□□□ -0.89
SMARCD1-211ENST00000551497 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
SMARCD1-211ENST00000551497 S100A2P29034 98 aa9.47□□□□□ -0.89
SMARCD1-211ENST00000551497 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-211ENST00000551497 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-211ENST00000551497 FAT1Q14517 4588 aa9.47□□□□□ -0.89
SMARCD1-211ENST00000551497 HERVK_113P61574 105 aa9.46□□□□□ -0.9
SMARCD1-211ENST00000551497 SERTAD4-AS1Q5TG53 156 aa9.46□□□□□ -0.9
SMARCD1-211ENST00000551497 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.9
SMARCD1-211ENST00000551497 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
SMARCD1-211ENST00000551497 A0A0U1RRA0 63 aa9.45□□□□□ -0.9
SMARCD1-211ENST00000551497 J3QQQ9 107 aa9.45□□□□□ -0.9
SMARCD1-211ENST00000551497 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
SMARCD1-211ENST00000551497 C5orf52A6NGY3 159 aa9.44□□□□□ -0.9
SMARCD1-211ENST00000551497 INAFM2P0DMQ5 153 aa9.44□□□□□ -0.9
SMARCD1-211ENST00000551497 LINC00158P58513 81 aa9.44□□□□□ -0.9
SMARCD1-211ENST00000551497 SFTA2Q6UW10 78 aa9.44□□□□□ -0.9
SMARCD1-211ENST00000551497 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
SMARCD1-211ENST00000551497 E9PLD3 99 aa9.43□□□□□ -0.9
SMARCD1-211ENST00000551497 SMIM13P0DJ93 91 aa9.43□□□□□ -0.9
SMARCD1-211ENST00000551497 COX17Q14061 63 aa9.43□□□□□ -0.9
SMARCD1-211ENST00000551497 KRTAP11-1Q8IUC1 163 aa9.43□□□□□ -0.9
SMARCD1-211ENST00000551497 ATOH7Q8N100 152 aa9.43□□□□□ -0.9
SMARCD1-211ENST00000551497 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
SMARCD1-211ENST00000551497 LGALS3P17931 250 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-211ENST00000551497 SRRM2Q9UQ35 2752 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-211ENST00000551497 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
SMARCD1-211ENST00000551497 C20orf202A1L168 122 aa9.41□□□□□ -0.9
SMARCD1-211ENST00000551497 M0QXV9 152 aa9.41□□□□□ -0.9
SMARCD1-211ENST00000551497 HNRNPA3P51991 378 aaKnown RBP9.41□□□□□ -0.9
SMARCD1-211ENST00000551497 HERV-K104P63124 156 aa9.41□□□□□ -0.9
SMARCD1-211ENST00000551497 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms