RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 MAPKAPK5-AS1Q8N8E1 139 aa6.88□□□□□ -1.31
NEK3-203ENST00000551355 C15orf56Q8N910 161 aa6.88□□□□□ -1.31
NEK3-203ENST00000551355 C14orf144Q96I85 54 aa6.88□□□□□ -1.31
NEK3-203ENST00000551355 GHRHP01286 108 aa6.87□□□□□ -1.31
NEK3-203ENST00000551355 TSPEAR-AS2P59090 65 aa6.87□□□□□ -1.31
NEK3-203ENST00000551355 CIRBPQ14011 172 aaKnown RBP6.87□□□□□ -1.31
NEK3-203ENST00000551355 PCP2Q8IVA1 136 aa6.87□□□□□ -1.31
NEK3-203ENST00000551355 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
NEK3-203ENST00000551355 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
NEK3-203ENST00000551355 MIEN1Q9BRT3 115 aa6.87□□□□□ -1.31
NEK3-203ENST00000551355 SCGB1D4Q6XE38 83 aa6.86□□□□□ -1.31
NEK3-203ENST00000551355 TRBV30A0A0K0K1B3 111 aa6.85□□□□□ -1.31
NEK3-203ENST00000551355 TIMM17BO60830 172 aa6.85□□□□□ -1.31
NEK3-203ENST00000551355 GCSHP23434 173 aa6.85□□□□□ -1.31
NEK3-203ENST00000551355 COX17Q14061 63 aa6.85□□□□□ -1.31
NEK3-203ENST00000551355 HIGD2BQ4VC39 106 aa6.85□□□□□ -1.31
NEK3-203ENST00000551355 CAMK2N2Q96S95 79 aa6.85□□□□□ -1.31
NEK3-203ENST00000551355 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
NEK3-203ENST00000551355 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
NEK3-203ENST00000551355 LRCOL1A6NCL2 159 aa6.84□□□□□ -1.31
NEK3-203ENST00000551355 SYCNQ0VAF6 134 aa6.84□□□□□ -1.31
NEK3-203ENST00000551355 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
NEK3-203ENST00000551355 LCE2AQ5TA79 106 aaPredicted RBP6.84□□□□□ -1.31
NEK3-203ENST00000551355 PRO1933Q9H354 126 aa6.84□□□□□ -1.31
NEK3-203ENST00000551355 VPS13DQ5THJ4 4388 aa6.83□□□□□ -1.32
NEK3-203ENST00000551355 A0A0J9YXY3 114 aa6.83□□□□□ -1.32
NEK3-203ENST00000551355 TMEM238C9JI98 176 aa6.83□□□□□ -1.32
NEK3-203ENST00000551355 CNBPP62633 177 aaKnown RBP6.83□□□□□ -1.32
NEK3-203ENST00000551355 Q6ZVH6 145 aa6.83□□□□□ -1.32
NEK3-203ENST00000551355 COPS9Q8WXC6 57 aa6.83□□□□□ -1.32
NEK3-203ENST00000551355 TTTY13Q9BZ97 58 aa6.83□□□□□ -1.32
NEK3-203ENST00000551355 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
NEK3-203ENST00000551355 DNAH1Q9P2D7 4330 aa6.82□□□□□ -1.32
NEK3-203ENST00000551355 A0A087WTM6 91 aa6.82□□□□□ -1.32
NEK3-203ENST00000551355 LECT2O14960 151 aa6.82□□□□□ -1.32
NEK3-203ENST00000551355 HNRNPA3P51991 378 aaKnown RBP6.82□□□□□ -1.32
NEK3-203ENST00000551355 MEIG1Q5JSS6 88 aa6.82□□□□□ -1.32
NEK3-203ENST00000551355 C2orf82Q6UX34 121 aa6.82□□□□□ -1.32
NEK3-203ENST00000551355 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
NEK3-203ENST00000551355 ERG28Q9UKR5 140 aa6.82□□□□□ -1.32
NEK3-203ENST00000551355 LYSTQ99698 3801 aa6.82□□□□□ -1.32
NEK3-203ENST00000551355 UNQ6190/PRO20217Q6UXQ8 127 aa6.81□□□□□ -1.32
NEK3-203ENST00000551355 Q8N814 137 aa6.81□□□□□ -1.32
NEK3-203ENST00000551355 SPANXB1Q9NS25 103 aaPredicted RBP6.81□□□□□ -1.32
NEK3-203ENST00000551355 ALMS1Q8TCU4 4167 aa6.8□□□□□ -1.32
NEK3-203ENST00000551355 DDTP30046 118 aa6.8□□□□□ -1.32
NEK3-203ENST00000551355 SRSF9Q13242 221 aaKnown RBP eCLIP6.8□□□□□ -1.32
NEK3-203ENST00000551355 TAL2Q16559 108 aa6.8□□□□□ -1.32
NEK3-203ENST00000551355 Q6ZRU5 148 aa6.8□□□□□ -1.32
NEK3-203ENST00000551355 LINC00336Q6ZUF6 198 aa6.8□□□□□ -1.32
NEK3-203ENST00000551355 LINC00526Q96FQ7 95 aa6.8□□□□□ -1.32
NEK3-203ENST00000551355 RTL8CO15255 209 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 IFITM1P13164 125 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 LINC00158P58513 81 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 WFDC2Q14508 124 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 C10orf25Q5T742 122 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 C2orf91Q6ZV80 131 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 HIST1H4GQ99525 98 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 SPANXDQ9BXN6 97 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 PPDPFQ9H3Y8 114 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 SPANXCQ9NY87 97 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
NEK3-203ENST00000551355 NDUFC2-KCTD14E9PQ53 114 aa6.78□□□□□ -1.32
NEK3-203ENST00000551355 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
NEK3-203ENST00000551355 SMIM13P0DJ93 91 aa6.78□□□□□ -1.32
NEK3-203ENST00000551355 PFN2P35080 140 aa6.78□□□□□ -1.32
NEK3-203ENST00000551355 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
NEK3-203ENST00000551355 HSD52Q0P140 79 aa6.78□□□□□ -1.32
NEK3-203ENST00000551355 LITAFQ99732 161 aa6.78□□□□□ -1.32
NEK3-203ENST00000551355 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
NEK3-203ENST00000551355 SLPIP03973 132 aa6.77□□□□□ -1.33
NEK3-203ENST00000551355 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.76□□□□□ -1.33
NEK3-203ENST00000551355 LOC107984640A0A0U1RRK4 108 aa6.76□□□□□ -1.33
NEK3-203ENST00000551355 M0R143 59 aa6.76□□□□□ -1.33
NEK3-203ENST00000551355 RPL24P83731 157 aaKnown RBP6.76□□□□□ -1.33
NEK3-203ENST00000551355 ADAMTSL4-AS1Q5T5F5 129 aa6.76□□□□□ -1.33
NEK3-203ENST00000551355 MIR7-3HGQ8N6C7 128 aa6.76□□□□□ -1.33
NEK3-203ENST00000551355 C9orf163Q8N9P6 203 aa6.76□□□□□ -1.33
NEK3-203ENST00000551355 LOC107984156A0A0G2JMH3 177 aa6.75□□□□□ -1.33
NEK3-203ENST00000551355 CTAG1AP78358 180 aa6.75□□□□□ -1.33
NEK3-203ENST00000551355 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
NEK3-203ENST00000551355 ARL17AQ8IVW1 177 aa6.75□□□□□ -1.33
NEK3-203ENST00000551355 A0A0U1RRA0 63 aa6.74□□□□□ -1.33
NEK3-203ENST00000551355 CEND1Q8N111 149 aa6.74□□□□□ -1.33
NEK3-203ENST00000551355 LINC00308Q8TCZ7 52 aa6.74□□□□□ -1.33
NEK3-203ENST00000551355 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
NEK3-203ENST00000551355 DNAH6Q9C0G6 4158 aa6.74□□□□□ -1.33
NEK3-203ENST00000551355 IGLV5-52A0A0A0MRZ9 124 aa6.73□□□□□ -1.33
NEK3-203ENST00000551355 PCP4L1A6NKN8 68 aa6.73□□□□□ -1.33
NEK3-203ENST00000551355 EIF4EBP3O60516 100 aaPredicted RBP6.73□□□□□ -1.33
NEK3-203ENST00000551355 SND1-IT1Q9HBX3 110 aa6.73□□□□□ -1.33
NEK3-203ENST00000551355 KMT2AQ03164 3969 aa6.73□□□□□ -1.33
NEK3-203ENST00000551355 C16orf90A8MZG2 172 aa6.72□□□□□ -1.33
NEK3-203ENST00000551355 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
NEK3-203ENST00000551355 Q6ZRP5 223 aa6.72□□□□□ -1.33
NEK3-203ENST00000551355 MUSTN1Q8IVN3 82 aa6.72□□□□□ -1.33
NEK3-203ENST00000551355 DAND5Q8N907 189 aa6.72□□□□□ -1.33
NEK3-203ENST00000551355 NDUFC2O95298 119 aa6.71□□□□□ -1.34
NEK3-203ENST00000551355 GAGE2EQ4V326 116 aa6.71□□□□□ -1.34
NEK3-203ENST00000551355 GAGE2DQ9UEU5 116 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms