RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 UNQ6190/PRO20217Q6UXQ8 127 aa9.71□□□□□ -0.86
PRPF40B-211ENST00000551063 C7orf33Q8WU49 177 aa9.71□□□□□ -0.86
PRPF40B-211ENST00000551063 CHCHD1Q96BP2 118 aaKnown RBP9.71□□□□□ -0.86
PRPF40B-211ENST00000551063 SCO1O75880 301 aa9.7□□□□□ -0.86
PRPF40B-211ENST00000551063 ATP5LO75964 103 aa9.7□□□□□ -0.86
PRPF40B-211ENST00000551063 PRSS2P07478 247 aa9.7□□□□□ -0.86
PRPF40B-211ENST00000551063 PMCHL1Q16048 86 aa9.69□□□□□ -0.86
PRPF40B-211ENST00000551063 TOMM7Q9P0U1 55 aa9.69□□□□□ -0.86
PRPF40B-211ENST00000551063 FAT3Q8TDW7 4589 aa9.68□□□□□ -0.86
PRPF40B-211ENST00000551063 KRTAP29-1A8MX34 341 aaPredicted RBP9.68□□□□□ -0.86
PRPF40B-211ENST00000551063 SMIM1B2RUZ4 78 aa9.68□□□□□ -0.86
PRPF40B-211ENST00000551063 CXCL5P42830 114 aa9.68□□□□□ -0.86
PRPF40B-211ENST00000551063 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
PRPF40B-211ENST00000551063 TRGC2P03986 189 aa9.67□□□□□ -0.86
PRPF40B-211ENST00000551063 IGLC3P0DOY3 106 aa9.67□□□□□ -0.86
PRPF40B-211ENST00000551063 CKS1BP61024 79 aa9.67□□□□□ -0.86
PRPF40B-211ENST00000551063 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
PRPF40B-211ENST00000551063 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
PRPF40B-211ENST00000551063 H3BRM9 83 aa9.66□□□□□ -0.86
PRPF40B-211ENST00000551063 Q6ZRP5 223 aa9.66□□□□□ -0.86
PRPF40B-211ENST00000551063 NDUFA6P56556 154 aa9.65□□□□□ -0.86
PRPF40B-211ENST00000551063 C9orf116Q5BN46 136 aaPredicted RBP9.65□□□□□ -0.86
PRPF40B-211ENST00000551063 BAGE3Q86Y29 109 aa9.65□□□□□ -0.86
PRPF40B-211ENST00000551063 A0A1W2PNN7 141 aa9.64□□□□□ -0.87
PRPF40B-211ENST00000551063 COLCA2A8K830 154 aa9.64□□□□□ -0.87
PRPF40B-211ENST00000551063 F8VRH5 84 aa9.64□□□□□ -0.87
PRPF40B-211ENST00000551063 HSBP1O75506 76 aa9.64□□□□□ -0.87
PRPF40B-211ENST00000551063 LRP1Q07954 4544 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-211ENST00000551063 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
PRPF40B-211ENST00000551063 HNRNPA3P51991 378 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-211ENST00000551063 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-211ENST00000551063 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
PRPF40B-211ENST00000551063 ZNF22P17026 224 aaPredicted RBP9.62□□□□□ -0.87
PRPF40B-211ENST00000551063 GAGE2EQ4V326 116 aa9.62□□□□□ -0.87
PRPF40B-211ENST00000551063 GAGE2DQ9UEU5 116 aa9.62□□□□□ -0.87
PRPF40B-211ENST00000551063 TRAV12-1A0A0B4J245 112 aa9.61□□□□□ -0.87
PRPF40B-211ENST00000551063 IFI27L1Q96BM0 104 aa9.61□□□□□ -0.87
PRPF40B-211ENST00000551063 IGLV5-39A0A0G2JS06 123 aa9.6□□□□□ -0.87
PRPF40B-211ENST00000551063 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
PRPF40B-211ENST00000551063 C11orf86A6NJI1 115 aa9.59□□□□□ -0.87
PRPF40B-211ENST00000551063 OXTP01178 125 aa9.59□□□□□ -0.87
PRPF40B-211ENST00000551063 LINC00310P59036 64 aa9.59□□□□□ -0.87
PRPF40B-211ENST00000551063 FAM168BA1KXE4 195 aa9.58□□□□□ -0.88
PRPF40B-211ENST00000551063 SERF1AO75920 110 aa9.58□□□□□ -0.88
PRPF40B-211ENST00000551063 C9orf129Q5T035 196 aaKnown RBP9.58□□□□□ -0.88
PRPF40B-211ENST00000551063 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
PRPF40B-211ENST00000551063 FAM19A2Q8N3H0 131 aa9.58□□□□□ -0.88
PRPF40B-211ENST00000551063 PHF5AQ7RTV0 110 aaKnown RBP9.57□□□□□ -0.88
PRPF40B-211ENST00000551063 FAM19A5Q7Z5A7 132 aaPredicted RBP9.57□□□□□ -0.88
PRPF40B-211ENST00000551063 TMEM170BQ5T4T1 132 aa9.56□□□□□ -0.88
PRPF40B-211ENST00000551063 M0QXV9 152 aa9.55□□□□□ -0.88
PRPF40B-211ENST00000551063 LEPROTL1O95214 131 aa9.55□□□□□ -0.88
PRPF40B-211ENST00000551063 ODF1Q14990 250 aa9.55□□□□□ -0.88
PRPF40B-211ENST00000551063 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
PRPF40B-211ENST00000551063 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
PRPF40B-211ENST00000551063 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
PRPF40B-211ENST00000551063 PSORS1C2Q9UIG4 136 aa9.53□□□□□ -0.88
PRPF40B-211ENST00000551063 HSPB8Q9UJY1 196 aa9.53□□□□□ -0.88
PRPF40B-211ENST00000551063 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.89
PRPF40B-211ENST00000551063 TMEM223A0PJW6 202 aa9.51□□□□□ -0.89
PRPF40B-211ENST00000551063 NUPR1O60356 82 aa9.51□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BKO60814 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BJP06899 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BOP23527 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BBP33778 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BDP58876 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BCP62807 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST2H2BEQ16778 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BHQ93079 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BNQ99877 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 HIST1H2BMQ99879 126 aa9.5□□□□□ -0.89
PRPF40B-211ENST00000551063 TNXBP22105 4242 aa9.49□□□□□ -0.89
PRPF40B-211ENST00000551063 UBE2BP63146 152 aa9.49□□□□□ -0.89
PRPF40B-211ENST00000551063 SRSF9Q13242 221 aaKnown RBP eCLIP9.49□□□□□ -0.89
PRPF40B-211ENST00000551063 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
PRPF40B-211ENST00000551063 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
PRPF40B-211ENST00000551063 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
PRPF40B-211ENST00000551063 PLA2G2DQ9UNK4 145 aa9.49□□□□□ -0.89
PRPF40B-211ENST00000551063 H0Y8G0 127 aa9.48□□□□□ -0.89
PRPF40B-211ENST00000551063 COX17Q14061 63 aa9.48□□□□□ -0.89
PRPF40B-211ENST00000551063 LBHQ53QV2 105 aaPredicted RBP9.48□□□□□ -0.89
PRPF40B-211ENST00000551063 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
PRPF40B-211ENST00000551063 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
PRPF40B-211ENST00000551063 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
PRPF40B-211ENST00000551063 FABP4P15090 132 aa9.47□□□□□ -0.89
PRPF40B-211ENST00000551063 PLNP26678 52 aa9.47□□□□□ -0.89
PRPF40B-211ENST00000551063 PFN2P35080 140 aa9.46□□□□□ -0.9
PRPF40B-211ENST00000551063 IGLV5-37A0A075B6J1 123 aa9.45□□□□□ -0.9
PRPF40B-211ENST00000551063 IGLV7-43P04211 117 aa9.45□□□□□ -0.9
PRPF40B-211ENST00000551063 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
PRPF40B-211ENST00000551063 MRPL55Q7Z7F7 128 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-211ENST00000551063 MAP1LC3CQ9BXW4 147 aa9.45□□□□□ -0.9
PRPF40B-211ENST00000551063 DPM2O94777 84 aa9.44□□□□□ -0.9
PRPF40B-211ENST00000551063 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
PRPF40B-211ENST00000551063 COA6Q5JTJ3 125 aaKnown RBP9.43□□□□□ -0.9
PRPF40B-211ENST00000551063 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
PRPF40B-211ENST00000551063 IGKCP01834 107 aa9.42□□□□□ -0.9
PRPF40B-211ENST00000551063 HERV-K104P63124 156 aa9.42□□□□□ -0.9
PRPF40B-211ENST00000551063 LINC01600Q96MT4 127 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms