RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ALMS1Q8TCU4 4167 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 IGLV10-54A0A075B6I4 117 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 IGHV3OR16-9A0A0B4J2B5 98 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 COX7A2LO14548 114 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 RTL8CO15255 209 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 PSCAO43653 123 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 PLNP26678 52 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 S100A2P29034 98 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 XCL1P47992 114 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 HERVK_113P63121 156 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 RNASE13Q5GAN3 156 aaKnown RBP3.78□□□□□ -1.8
SCAF11-213ENST00000550629 CFAP161Q6P656 301 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 LINC01561Q8N1V8 128 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 STPG4Q8N801 248 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
SCAF11-213ENST00000550629 GEMIN7Q9H840 131 aaKnown RBP3.78□□□□□ -1.8
SCAF11-213ENST00000550629 RYR2Q92736 4967 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 VPS13DQ5THJ4 4388 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 A0A087WZ39 114 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 IGKV3OR2-268A0A0C4DH90 116 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 F8VRH5 84 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 SYS1-DBNDD2H3BUS1 97 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 IGLC3P0DOY3 106 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 FABP4P15090 132 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 SNRPEP62304 92 aaKnown RBP3.77□□□□□ -1.81
SCAF11-213ENST00000550629 PET117Q6UWS5 81 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 Q75L30 129 aa3.77□□□□□ -1.81
SCAF11-213ENST00000550629 CHTOPQ9Y3Y2 248 aaKnown RBP3.77□□□□□ -1.81
SCAF11-213ENST00000550629 IGLV4-69A0A075B6H9 119 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 GVQW2A0A096LPI5 108 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-213ENST00000550629 IGHV1-58A0A0C4DH39 117 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 A0A0J9YXV3 536 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 C20orf202A1L168 122 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 LRCOL1A6NCL2 159 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 F8WDY8 70 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 H3BRM9 83 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 DPM2O94777 84 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 APOMO95445 188 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 ZC2HC1BQ5TFG8 222 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 MAPKAPK5-AS1Q8N8E1 139 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 OR10D4PQ8NGN7 298 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 CHAC1Q9BUX1 264 aa3.76□□□□□ -1.81
SCAF11-213ENST00000550629 IGHV3-64A0A075B6Q5 118 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 A0A087WTM6 91 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 C11orf86A6NJI1 115 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 C3orf79P0CE67 100 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 KRTDAPP60985 99 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 COX6A2Q02221 97 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 LINC01545Q5VT33 79 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 LINC00469Q8N7U9 141 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 MRPL35Q9NZE8 188 aaKnown RBP3.75□□□□□ -1.81
SCAF11-213ENST00000550629 CDKN2A-AS1Q9UH64 79 aa3.75□□□□□ -1.81
SCAF11-213ENST00000550629 H0Y8G0 127 aa3.74□□□□□ -1.81
SCAF11-213ENST00000550629 ZNF22P17026 224 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-213ENST00000550629 CNBPP62633 177 aaKnown RBP3.74□□□□□ -1.81
SCAF11-213ENST00000550629 SFTA2Q6UW10 78 aa3.74□□□□□ -1.81
SCAF11-213ENST00000550629 C5orf38Q86SI9 138 aa3.74□□□□□ -1.81
SCAF11-213ENST00000550629 Q8N814 137 aa3.74□□□□□ -1.81
SCAF11-213ENST00000550629 C15orf56Q8N910 161 aa3.74□□□□□ -1.81
SCAF11-213ENST00000550629 C2orf48Q96LS8 159 aa3.74□□□□□ -1.81
SCAF11-213ENST00000550629 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.73□□□□□ -1.81
SCAF11-213ENST00000550629 IGKCP01834 107 aa3.73□□□□□ -1.81
SCAF11-213ENST00000550629 WFDC2Q14508 124 aa3.73□□□□□ -1.81
SCAF11-213ENST00000550629 TMEM170BQ5T4T1 132 aa3.73□□□□□ -1.81
SCAF11-213ENST00000550629 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
SCAF11-213ENST00000550629 Q8IZM0 81 aa3.73□□□□□ -1.81
SCAF11-213ENST00000550629 PKIGQ9Y2B9 76 aa3.73□□□□□ -1.81
SCAF11-213ENST00000550629 RYR3Q15413 4870 aa3.73□□□□□ -1.81
SCAF11-213ENST00000550629 DNAH6Q9C0G6 4158 aa3.72□□□□□ -1.81
SCAF11-213ENST00000550629 TMEM223A0PJW6 202 aa3.72□□□□□ -1.81
SCAF11-213ENST00000550629 LECT2O14960 151 aa3.72□□□□□ -1.81
SCAF11-213ENST00000550629 CXCL5P42830 114 aa3.72□□□□□ -1.81
SCAF11-213ENST00000550629 HERVK_113P61574 105 aa3.72□□□□□ -1.81
SCAF11-213ENST00000550629 SPAG11BQ08648 103 aa3.72□□□□□ -1.81
SCAF11-213ENST00000550629 KIAA0087Q14695 138 aa3.72□□□□□ -1.81
SCAF11-213ENST00000550629 ORAOV1Q8WV07 137 aa3.72□□□□□ -1.81
SCAF11-213ENST00000550629 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.81
SCAF11-213ENST00000550629 KMT2AQ03164 3969 aa3.71□□□□□ -1.82
SCAF11-213ENST00000550629 A0A1B0GVY2 172 aa3.71□□□□□ -1.82
SCAF11-213ENST00000550629 SPINK8P0C7L1 97 aa3.71□□□□□ -1.82
SCAF11-213ENST00000550629 CKS1BP61024 79 aa3.71□□□□□ -1.82
SCAF11-213ENST00000550629 C6orf226Q5I0X4 101 aa3.71□□□□□ -1.82
SCAF11-213ENST00000550629 COX7B2Q8TF08 81 aa3.71□□□□□ -1.82
SCAF11-213ENST00000550629 PLEKHB2Q96CS7 222 aa3.71□□□□□ -1.82
SCAF11-213ENST00000550629 PMCHL2Q9BQD1 86 aa3.71□□□□□ -1.82
SCAF11-213ENST00000550629 SACSQ9NZJ4 4579 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 TRBV30A0A0K0K1B3 111 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 E9PLD3 99 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 NDUFA1O15239 70 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 LEPROTO15243 131 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 SCGB1D1O95968 90 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 NMUP48645 174 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 SYCNQ0VAF6 134 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 JOSD1Q15040 202 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-213ENST00000550629 HIGD2BQ4VC39 106 aa3.7□□□□□ -1.82
SCAF11-213ENST00000550629 C9orf163Q8N9P6 203 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms