RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.27□□□□□ -2.05
CCNT1-203ENST00000550457 Q8N814 137 aa2.27□□□□□ -2.05
CCNT1-203ENST00000550457 C16orf95Q9H693 158 aa2.27□□□□□ -2.05
CCNT1-203ENST00000550457 SPTBN1Q01082 2364 aaKnown RBP2.27□□□□□ -2.05
CCNT1-203ENST00000550457 POLEQ07864 2286 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 KALRNO60229 2985 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 TLN1Q9Y490 2541 aaKnown RBP2.26□□□□□ -2.05
CCNT1-203ENST00000550457 TRAV23DV6A0A075B6W5 121 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 A0A087WZ39 114 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 TRBV7-6A0A0J9YX20 115 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 A6NDX4 124 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 UBE2L6O14933 153 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 INSP01308 110 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 MIFP14174 115 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 RPL35AP18077 110 aaKnown RBP2.26□□□□□ -2.05
CCNT1-203ENST00000550457 LINC00158P58513 81 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 DEFB1P60022 68 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 SPINK13Q1W4C9 94 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 C9orf66Q5T8R8 295 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 FREM2Q5SZK8 3169 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 SPTA1P02549 2419 aa2.26□□□□□ -2.05
CCNT1-203ENST00000550457 CNOT1A5YKK6 2376 aaKnown RBP2.25□□□□□ -2.05
CCNT1-203ENST00000550457 A0A0U1RRA0 63 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 A0A1B0GW54 56 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 IGHV3-11P01762 117 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 CMC4P56277 68 aaPredicted RBP2.25□□□□□ -2.05
CCNT1-203ENST00000550457 SS18Q15532 418 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 RNASE13Q5GAN3 156 aaKnown RBP2.25□□□□□ -2.05
CCNT1-203ENST00000550457 Q6ZQT0 140 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 FP248Q71RG6 208 aaPredicted RBP2.25□□□□□ -2.05
CCNT1-203ENST00000550457 PRR15Q8IV56 129 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 C6orf223Q8N319 242 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 C11orf72Q8NBR9 251 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 LINC01560Q8TB33 94 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 DEFB104AQ8WTQ1 72 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 NACAE9PAV3 2078 aa2.25□□□□□ -2.05
CCNT1-203ENST00000550457 SPEGQ15772 3267 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 IGKV3-7A0A075B6H7 116 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 IGHV3-73A0A0B4J1V6 119 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 IGHV3OR16-9A0A0B4J2B5 98 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 IGHV3-38A0A0C4DH36 116 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 TRBV7-4A0A0J9YYF1 115 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 PLAC8L1A1L4L8 177 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 LYRM9A8MSI8 78 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 F8WEM9 126 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 CCL24O00175 119 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 CCL21O00585 134 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 IGHV4-59P01825 116 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 NBL1P41271 181 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 DEFB114Q30KQ6 69 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 C6orf226Q5I0X4 101 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 C9orf129Q5T035 196 aaKnown RBP2.24□□□□□ -2.05
CCNT1-203ENST00000550457 NTM-AS1Q6ZSK4 140 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 FAM19A1Q7Z5A9 133 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 Q8IZM0 81 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 TMEM254Q8TBM7 123 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 UBE2E2Q96LR5 201 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 PRO3102Q9H379 93 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 C11orf68Q9H3H3 251 aaKnown RBP2.24□□□□□ -2.05
CCNT1-203ENST00000550457 PRR34Q9NV39 138 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 TRIOBPQ9H2D6 2365 aa2.24□□□□□ -2.05
CCNT1-203ENST00000550457 CEP295Q9C0D2 2601 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 SPTBN2O15020 2390 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 ARHGAP32A7KAX9 2087 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 IGHV4-31P0DP07 118 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 PMAIP1Q13794 54 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 NREPQ16612 68 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 Q1T7F1 81 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 ESRGQ1W209 222 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.23□□□□□ -2.05
CCNT1-203ENST00000550457 LINC00575Q6W349 94 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 Q6ZRU5 148 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 Q6ZVQ6 151 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 STHQ8IWL8 128 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 DEFB124Q8NES8 71 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 BRK1Q8WUW1 75 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 PKIGQ9Y2B9 76 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 GVINP1Q7Z2Y8 2422 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 TECTAO75443 2155 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 AKAP13Q12802 2813 aa2.23□□□□□ -2.05
CCNT1-203ENST00000550457 DMDP11532 3685 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 ZNF292O60281 2723 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 APC2O95996 2303 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 SMG1Q96Q15 3661 aaKnown RBP2.22□□□□□ -2.05
CCNT1-203ENST00000550457 IGHV4-30-2A0A087WSY4 118 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 A0A0U1RQV1 116 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 H3BUX3 64 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 BPY2O14599 106 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 LY6HO94772 140 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 DNAH10OSP0CZ25 163 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 HTN1P15515 57 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 FUSP35637 526 aaKnown RBP eCLIP2.22□□□□□ -2.05
CCNT1-203ENST00000550457 DEFB131AP59861 70 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 HAMPP81172 84 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 Q75L30 129 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 WFDC11Q8NEX6 87 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 PRAC1Q96KF2 57 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 BPESC1Q9GZL8 116 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 ESM1Q9NQ30 184 aa2.22□□□□□ -2.05
CCNT1-203ENST00000550457 TOMM7Q9P0U1 55 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms