RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 MSMBP08118 114 aa8.58□□□□□ -1.04
VDR-208ENST00000550325 STHQ8IWL8 128 aa8.58□□□□□ -1.04
VDR-208ENST00000550325 ZNF843Q8N446 348 aa8.58□□□□□ -1.04
VDR-208ENST00000550325 C19orf84I3L1E1 186 aa8.58□□□□□ -1.04
VDR-208ENST00000550325 WFDC11Q8NEX6 87 aa8.58□□□□□ -1.04
VDR-208ENST00000550325 TMEM89A2RUT3 159 aa8.57□□□□□ -1.04
VDR-208ENST00000550325 XCL1P47992 114 aa8.57□□□□□ -1.04
VDR-208ENST00000550325 MAP6D1Q9H9H5 199 aa8.57□□□□□ -1.04
VDR-208ENST00000550325 LAMTOR3Q9UHA4 124 aa8.57□□□□□ -1.04
VDR-208ENST00000550325 TEP1Q99973 2627 aaKnown RBP8.56□□□□□ -1.04
VDR-208ENST00000550325 TMEM86BQ8N661 226 aa8.56□□□□□ -1.04
VDR-208ENST00000550325 TRGV4A0A0C4DH28 118 aa8.56□□□□□ -1.04
VDR-208ENST00000550325 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
VDR-208ENST00000550325 A0A1W2PRX2 142 aa8.55□□□□□ -1.04
VDR-208ENST00000550325 NDUFC2O95298 119 aa8.55□□□□□ -1.04
VDR-208ENST00000550325 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
VDR-208ENST00000550325 SCXQ7RTU7 201 aa8.54□□□□□ -1.04
VDR-208ENST00000550325 WIPF1O43516 503 aa8.53□□□□□ -1.04
VDR-208ENST00000550325 RMI2Q96E14 147 aa8.53□□□□□ -1.04
VDR-208ENST00000550325 JMJD7-PLA2G4BH0Y9G9 81 aa8.52□□□□□ -1.04
VDR-208ENST00000550325 PLA2G2AP14555 144 aa8.52□□□□□ -1.04
VDR-208ENST00000550325 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.04
VDR-208ENST00000550325 A0A096LPF7 62 aa8.52□□□□□ -1.05
VDR-208ENST00000550325 A0A0U1RQV1 116 aa8.52□□□□□ -1.05
VDR-208ENST00000550325 A8MTW9 85 aa8.52□□□□□ -1.05
VDR-208ENST00000550325 TRBV6-4A0A1B0GX49 114 aa8.51□□□□□ -1.05
VDR-208ENST00000550325 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
VDR-208ENST00000550325 RPL35AP18077 110 aaKnown RBP8.51□□□□□ -1.05
VDR-208ENST00000550325 ZANQ9Y493 2812 aa8.51□□□□□ -1.05
VDR-208ENST00000550325 TMEM256-PLSCR3K7ERE1 68 aa8.51□□□□□ -1.05
VDR-208ENST00000550325 CELSR2Q9HCU4 2923 aa8.51□□□□□ -1.05
VDR-208ENST00000550325 ITPR1Q14643 2758 aa8.5□□□□□ -1.05
VDR-208ENST00000550325 Q8N814 137 aa8.5□□□□□ -1.05
VDR-208ENST00000550325 TRBV10-1A0A0K0K1A3 114 aa8.5□□□□□ -1.05
VDR-208ENST00000550325 F8WEM9 126 aa8.5□□□□□ -1.05
VDR-208ENST00000550325 SS18Q15532 418 aa8.5□□□□□ -1.05
VDR-208ENST00000550325 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
VDR-208ENST00000550325 OBSCN-AS1Q96MR7 158 aa8.5□□□□□ -1.05
VDR-208ENST00000550325 B4DSR2 109 aa8.49□□□□□ -1.05
VDR-208ENST00000550325 C6orf99Q4VX62 202 aa8.49□□□□□ -1.05
VDR-208ENST00000550325 BRK1Q8WUW1 75 aa8.49□□□□□ -1.05
VDR-208ENST00000550325 F8P00451 2351 aa8.49□□□□□ -1.05
VDR-208ENST00000550325 IGLV10-54A0A075B6I4 117 aa8.48□□□□□ -1.05
VDR-208ENST00000550325 TRAV10A0A0B4J240 114 aa8.48□□□□□ -1.05
VDR-208ENST00000550325 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
VDR-208ENST00000550325 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
VDR-208ENST00000550325 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
VDR-208ENST00000550325 ATP5EP2Q5VTU8 51 aa8.48□□□□□ -1.05
VDR-208ENST00000550325 IGHV3OR16-9A0A0B4J2B5 98 aa8.47□□□□□ -1.05
VDR-208ENST00000550325 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
VDR-208ENST00000550325 MRAPQ8TCY5 172 aa8.47□□□□□ -1.05
VDR-208ENST00000550325 SERP1Q9Y6X1 66 aa8.47□□□□□ -1.05
VDR-208ENST00000550325 M0R2N4 97 aa8.46□□□□□ -1.06
VDR-208ENST00000550325 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.06
VDR-208ENST00000550325 WFDC10AQ9H1F0 79 aa8.46□□□□□ -1.06
VDR-208ENST00000550325 LINC00474Q9P2X8 69 aa8.46□□□□□ -1.06
VDR-208ENST00000550325 NDUFC2-KCTD14E9PQ53 114 aa8.45□□□□□ -1.06
VDR-208ENST00000550325 H7BZZ5 65 aa8.45□□□□□ -1.06
VDR-208ENST00000550325 J3QLI3 93 aa8.45□□□□□ -1.06
VDR-208ENST00000550325 ODF3L2Q3SX64 289 aa8.45□□□□□ -1.06
VDR-208ENST00000550325 FAM19A3Q7Z5A8 133 aa8.45□□□□□ -1.06
VDR-208ENST00000550325 ITPR3Q14573 2671 aa8.45□□□□□ -1.06
VDR-208ENST00000550325 UTP20O75691 2785 aaKnown RBP8.45□□□□□ -1.06
VDR-208ENST00000550325 GCN1Q92616 2671 aaKnown RBP8.45□□□□□ -1.06
VDR-208ENST00000550325 PRO0628Q9UI54 55 aa8.45□□□□□ -1.06
VDR-208ENST00000550325 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
VDR-208ENST00000550325 A0A087WZ39 114 aa8.44□□□□□ -1.06
VDR-208ENST00000550325 TRBV6-8A0A0A6YYG3 113 aa8.44□□□□□ -1.06
VDR-208ENST00000550325 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
VDR-208ENST00000550325 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
VDR-208ENST00000550325 LINC00269Q8N2A0 174 aa8.43□□□□□ -1.06
VDR-208ENST00000550325 ZNF702PQ9H963 129 aa8.43□□□□□ -1.06
VDR-208ENST00000550325 FBN2P35556 2912 aa8.43□□□□□ -1.06
VDR-208ENST00000550325 Q6ZVQ6 151 aa8.42□□□□□ -1.06
VDR-208ENST00000550325 Q8N3U1 123 aa8.42□□□□□ -1.06
VDR-208ENST00000550325 FLNAP21333 2647 aaKnown RBP8.42□□□□□ -1.06
VDR-208ENST00000550325 A0A096LNT2 108 aa8.41□□□□□ -1.06
VDR-208ENST00000550325 DAD1P61803 113 aa8.41□□□□□ -1.06
VDR-208ENST00000550325 NBEAL2Q6ZNJ1 2754 aa8.41□□□□□ -1.06
VDR-208ENST00000550325 Q6ZQY7 126 aa8.4□□□□□ -1.06
VDR-208ENST00000550325 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.06
VDR-208ENST00000550325 SMIM26A0A096LP01 95 aa8.4□□□□□ -1.06
VDR-208ENST00000550325 KRTAP10-9P60411 292 aa8.4□□□□□ -1.06
VDR-208ENST00000550325 LYPD5Q6UWN5 251 aa8.4□□□□□ -1.06
VDR-208ENST00000550325 TRBV7-6A0A0J9YX20 115 aa8.39□□□□□ -1.07
VDR-208ENST00000550325 NANOS2P60321 138 aaKnown RBP8.39□□□□□ -1.07
VDR-208ENST00000550325 ITPR2Q14571 2701 aa8.39□□□□□ -1.07
VDR-208ENST00000550325 BAHCC1Q9P281 2608 aa8.39□□□□□ -1.07
VDR-208ENST00000550325 ESM1Q9NQ30 184 aa8.39□□□□□ -1.07
VDR-208ENST00000550325 GYPEP15421 78 aa8.39□□□□□ -1.07
VDR-208ENST00000550325 LY6G6DO95868 133 aa8.38□□□□□ -1.07
VDR-208ENST00000550325 LINC01356Q8N9X3 169 aa8.38□□□□□ -1.07
VDR-208ENST00000550325 MXRA5Q9NR99 2828 aa8.38□□□□□ -1.07
VDR-208ENST00000550325 Q6ZQT0 140 aa8.38□□□□□ -1.07
VDR-208ENST00000550325 Q8N9L7 120 aa8.38□□□□□ -1.07
VDR-208ENST00000550325 ATRQ13535 2644 aa8.38□□□□□ -1.07
VDR-208ENST00000550325 SPATA3Q8NHX4 192 aa8.38□□□□□ -1.07
VDR-208ENST00000550325 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
VDR-208ENST00000550325 NIPBLQ6KC79 2804 aaeCLIP8.37□□□□□ -1.07
VDR-208ENST00000550325 TRBV10-3A0A0K0K1G6 114 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms