RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 RAB5BP61020 215 aa10.75□□□□□ -0.69
CHMP1A-208ENST00000550102 PMVKQ15126 192 aa10.75□□□□□ -0.69
CHMP1A-208ENST00000550102 Q6ZRP5 223 aa10.75□□□□□ -0.69
CHMP1A-208ENST00000550102 IGLV5-45A0A087WSX0 123 aa10.74□□□□□ -0.69
CHMP1A-208ENST00000550102 A0A096LNJ9 63 aa10.74□□□□□ -0.69
CHMP1A-208ENST00000550102 NDUFC2-KCTD14E9PQ53 114 aa10.74□□□□□ -0.69
CHMP1A-208ENST00000550102 HBDP02042 147 aa10.74□□□□□ -0.69
CHMP1A-208ENST00000550102 C6orf226Q5I0X4 101 aa10.74□□□□□ -0.69
CHMP1A-208ENST00000550102 URB1-AS1Q96HZ7 61 aa10.74□□□□□ -0.69
CHMP1A-208ENST00000550102 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
CHMP1A-208ENST00000550102 CBLN2Q8IUK8 224 aa10.73□□□□□ -0.69
CHMP1A-208ENST00000550102 CXCL5P42830 114 aa10.72□□□□□ -0.69
CHMP1A-208ENST00000550102 GAGE2EQ4V326 116 aa10.72□□□□□ -0.69
CHMP1A-208ENST00000550102 GAGE2DQ9UEU5 116 aa10.72□□□□□ -0.69
CHMP1A-208ENST00000550102 LRP1Q07954 4544 aaKnown RBP10.72□□□□□ -0.69
CHMP1A-208ENST00000550102 F8VRH5 84 aa10.71□□□□□ -0.69
CHMP1A-208ENST00000550102 PMCHL1Q16048 86 aa10.71□□□□□ -0.69
CHMP1A-208ENST00000550102 PDZD11Q5EBL8 140 aa10.71□□□□□ -0.69
CHMP1A-208ENST00000550102 FAM19A5Q7Z5A7 132 aaPredicted RBP10.7□□□□□ -0.7
CHMP1A-208ENST00000550102 FAM168BA1KXE4 195 aa10.69□□□□□ -0.7
CHMP1A-208ENST00000550102 H3BRM9 83 aa10.69□□□□□ -0.7
CHMP1A-208ENST00000550102 ATP5LO75964 103 aa10.69□□□□□ -0.7
CHMP1A-208ENST00000550102 NDUFA6P56556 154 aa10.69□□□□□ -0.7
CHMP1A-208ENST00000550102 COX7B2Q8TF08 81 aa10.69□□□□□ -0.7
CHMP1A-208ENST00000550102 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
CHMP1A-208ENST00000550102 SPINK8P0C7L1 97 aa10.68□□□□□ -0.7
CHMP1A-208ENST00000550102 IGLC3P0DOY3 106 aa10.68□□□□□ -0.7
CHMP1A-208ENST00000550102 PHF5AQ7RTV0 110 aaKnown RBP10.68□□□□□ -0.7
CHMP1A-208ENST00000550102 SLC7A5P1Q8MH63 180 aa10.68□□□□□ -0.7
CHMP1A-208ENST00000550102 CHCHD1Q96BP2 118 aaKnown RBP10.67□□□□□ -0.7
CHMP1A-208ENST00000550102 M0QXV9 152 aa10.66□□□□□ -0.7
CHMP1A-208ENST00000550102 PSORS1C2Q9UIG4 136 aa10.66□□□□□ -0.7
CHMP1A-208ENST00000550102 C9orf129Q5T035 196 aaKnown RBP10.65□□□□□ -0.7
CHMP1A-208ENST00000550102 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.7
CHMP1A-208ENST00000550102 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
CHMP1A-208ENST00000550102 IGLV5-39A0A0G2JS06 123 aa10.62□□□□□ -0.71
CHMP1A-208ENST00000550102 BAGE3Q86Y29 109 aa10.62□□□□□ -0.71
CHMP1A-208ENST00000550102 KRTAP7-1Q8IUC3 87 aa10.62□□□□□ -0.71
CHMP1A-208ENST00000550102 XAGE1AQ9HD64 81 aa10.62□□□□□ -0.71
CHMP1A-208ENST00000550102 TRGC2P03986 189 aa10.61□□□□□ -0.71
CHMP1A-208ENST00000550102 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
CHMP1A-208ENST00000550102 C1orf137Q5JT78 98 aa10.61□□□□□ -0.71
CHMP1A-208ENST00000550102 SERTAD4-AS1Q5TG53 156 aa10.61□□□□□ -0.71
CHMP1A-208ENST00000550102 REG3GQ6UW15 175 aa10.61□□□□□ -0.71
CHMP1A-208ENST00000550102 C11orf86A6NJI1 115 aa10.6□□□□□ -0.71
CHMP1A-208ENST00000550102 HSBP1O75506 76 aa10.6□□□□□ -0.71
CHMP1A-208ENST00000550102 UBE2BP63146 152 aa10.6□□□□□ -0.71
CHMP1A-208ENST00000550102 SRSF9Q13242 221 aaKnown RBP eCLIP10.6□□□□□ -0.71
CHMP1A-208ENST00000550102 IFI27L1Q96BM0 104 aa10.6□□□□□ -0.71
CHMP1A-208ENST00000550102 TMEM170BQ5T4T1 132 aa10.59□□□□□ -0.71
CHMP1A-208ENST00000550102 CHTOPQ9Y3Y2 248 aaKnown RBP10.59□□□□□ -0.71
CHMP1A-208ENST00000550102 KRTAP11-1Q8IUC1 163 aa10.58□□□□□ -0.72
CHMP1A-208ENST00000550102 TRAV12-1A0A0B4J245 112 aa10.57□□□□□ -0.72
CHMP1A-208ENST00000550102 LINC01600Q96MT4 127 aa10.57□□□□□ -0.72
CHMP1A-208ENST00000550102 IGLV7-43P04211 117 aa10.56□□□□□ -0.72
CHMP1A-208ENST00000550102 ODF1Q14990 250 aa10.56□□□□□ -0.72
CHMP1A-208ENST00000550102 FAM19A2Q8N3H0 131 aa10.56□□□□□ -0.72
CHMP1A-208ENST00000550102 SFTA2Q6UW10 78 aa10.55□□□□□ -0.72
CHMP1A-208ENST00000550102 TP73-AS1Q9UF72 201 aa10.55□□□□□ -0.72
CHMP1A-208ENST00000550102 COLCA2A8K830 154 aa10.54□□□□□ -0.72
CHMP1A-208ENST00000550102 SERF1AO75920 110 aa10.54□□□□□ -0.72
CHMP1A-208ENST00000550102 LBHQ53QV2 105 aaPredicted RBP10.54□□□□□ -0.72
CHMP1A-208ENST00000550102 C22orf24Q9Y442 160 aa10.54□□□□□ -0.72
CHMP1A-208ENST00000550102 LINC00310P59036 64 aa10.53□□□□□ -0.72
CHMP1A-208ENST00000550102 DIRC1Q969H9 104 aa10.53□□□□□ -0.72
CHMP1A-208ENST00000550102 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
CHMP1A-208ENST00000550102 ERG28Q9UKR5 140 aa10.52□□□□□ -0.73
CHMP1A-208ENST00000550102 PLA2G2DQ9UNK4 145 aa10.52□□□□□ -0.73
CHMP1A-208ENST00000550102 PFN2P35080 140 aa10.51□□□□□ -0.73
CHMP1A-208ENST00000550102 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
CHMP1A-208ENST00000550102 LEPROTL1O95214 131 aa10.5□□□□□ -0.73
CHMP1A-208ENST00000550102 COX17Q14061 63 aa10.5□□□□□ -0.73
CHMP1A-208ENST00000550102 H0Y8G0 127 aa10.49□□□□□ -0.73
CHMP1A-208ENST00000550102 H0Y9J4 135 aa10.49□□□□□ -0.73
CHMP1A-208ENST00000550102 NUPR1O60356 82 aa10.49□□□□□ -0.73
CHMP1A-208ENST00000550102 NKAPP1Q8N9T2 125 aa10.49□□□□□ -0.73
CHMP1A-208ENST00000550102 ZNF625Q96I27 306 aaPredicted RBP10.49□□□□□ -0.73
CHMP1A-208ENST00000550102 HSPB8Q9UJY1 196 aa10.49□□□□□ -0.73
CHMP1A-208ENST00000550102 IGLV5-37A0A075B6J1 123 aa10.48□□□□□ -0.73
CHMP1A-208ENST00000550102 SND1-IT1Q9HBX3 110 aa10.47□□□□□ -0.73
CHMP1A-208ENST00000550102 TNXBP22105 4242 aa10.46□□□□□ -0.74
CHMP1A-208ENST00000550102 GAGE10A6NGK3 116 aa10.45□□□□□ -0.74
CHMP1A-208ENST00000550102 SCO1O75880 301 aa10.45□□□□□ -0.74
CHMP1A-208ENST00000550102 PLNP26678 52 aa10.45□□□□□ -0.74
CHMP1A-208ENST00000550102 KRTAP10-8P60410 259 aa10.45□□□□□ -0.74
CHMP1A-208ENST00000550102 LINC00167Q96N53 147 aa10.45□□□□□ -0.74
CHMP1A-208ENST00000550102 FABP4P15090 132 aa10.44□□□□□ -0.74
CHMP1A-208ENST00000550102 RPL37AP8A6NKH3 93 aa10.43□□□□□ -0.74
CHMP1A-208ENST00000550102 ZNF861PO60384 105 aa10.42□□□□□ -0.74
CHMP1A-208ENST00000550102 BCE1O60756 84 aa10.42□□□□□ -0.74
CHMP1A-208ENST00000550102 VPREB1P12018 145 aa10.42□□□□□ -0.74
CHMP1A-208ENST00000550102 LINC00158P58513 81 aa10.42□□□□□ -0.74
CHMP1A-208ENST00000550102 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
CHMP1A-208ENST00000550102 HMCN2Q8NDA2 5059 aa10.42□□□□□ -0.74
CHMP1A-208ENST00000550102 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
CHMP1A-208ENST00000550102 DPM2O94777 84 aa10.41□□□□□ -0.74
CHMP1A-208ENST00000550102 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
CHMP1A-208ENST00000550102 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
CHMP1A-208ENST00000550102 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
CHMP1A-208ENST00000550102 RPL28P46779 137 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms