RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 H0Y8G0 127 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 SPINK8P0C7L1 97 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 CXCL5P42830 114 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 CIRBPQ14011 172 aaKnown RBP4.62□□□□□ -1.67
PTCH1-219ENST00000549678 RNF151Q2KHN1 245 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 GAGE2EQ4V326 116 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 C2orf82Q6UX34 121 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 UNQ6190/PRO20217Q6UXQ8 127 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 FAM19A3Q7Z5A8 133 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 Q8IZM0 81 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 YPEL4Q96NS1 127 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 CST9LQ9H4G1 147 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 C6orf48Q9UBA6 75 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 GAGE2DQ9UEU5 116 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 TNXBP22105 4242 aa4.62□□□□□ -1.67
PTCH1-219ENST00000549678 OXTP01178 125 aa4.61□□□□□ -1.67
PTCH1-219ENST00000549678 TMEM170BQ5T4T1 132 aa4.61□□□□□ -1.67
PTCH1-219ENST00000549678 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
PTCH1-219ENST00000549678 COX7B2Q8TF08 81 aa4.61□□□□□ -1.67
PTCH1-219ENST00000549678 URB1-AS1Q96HZ7 61 aa4.61□□□□□ -1.67
PTCH1-219ENST00000549678 PLAC8Q9NZF1 115 aa4.61□□□□□ -1.67
PTCH1-219ENST00000549678 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
PTCH1-219ENST00000549678 A0A096LNJ9 63 aa4.6□□□□□ -1.67
PTCH1-219ENST00000549678 F8VRH5 84 aa4.6□□□□□ -1.67
PTCH1-219ENST00000549678 C9orf116Q5BN46 136 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-219ENST00000549678 PDZD11Q5EBL8 140 aa4.6□□□□□ -1.67
PTCH1-219ENST00000549678 FAM19A5Q7Z5A7 132 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-219ENST00000549678 FAM19A2Q8N3H0 131 aa4.6□□□□□ -1.67
PTCH1-219ENST00000549678 IFI27L1Q96BM0 104 aa4.6□□□□□ -1.67
PTCH1-219ENST00000549678 SMIM1B2RUZ4 78 aa4.59□□□□□ -1.67
PTCH1-219ENST00000549678 NDUFC2-KCTD14E9PQ53 114 aa4.59□□□□□ -1.67
PTCH1-219ENST00000549678 SCO1O75880 301 aa4.59□□□□□ -1.67
PTCH1-219ENST00000549678 LEPROTL1O95214 131 aa4.59□□□□□ -1.67
PTCH1-219ENST00000549678 TLX1NBP0CAT3 122 aa4.59□□□□□ -1.67
PTCH1-219ENST00000549678 IGLC3P0DOY3 106 aa4.59□□□□□ -1.67
PTCH1-219ENST00000549678 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-219ENST00000549678 KIAA0087Q14695 138 aa4.59□□□□□ -1.67
PTCH1-219ENST00000549678 SERTAD4-AS1Q5TG53 156 aa4.59□□□□□ -1.67
PTCH1-219ENST00000549678 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.68
PTCH1-219ENST00000549678 IGLV5-45A0A087WSX0 123 aa4.58□□□□□ -1.68
PTCH1-219ENST00000549678 COLCA2A8K830 154 aa4.58□□□□□ -1.68
PTCH1-219ENST00000549678 SERF1AO75920 110 aa4.58□□□□□ -1.68
PTCH1-219ENST00000549678 FABP4P15090 132 aa4.58□□□□□ -1.68
PTCH1-219ENST00000549678 ZNF22P17026 224 aaPredicted RBP4.58□□□□□ -1.68
PTCH1-219ENST00000549678 UBE2BP63146 152 aa4.58□□□□□ -1.68
PTCH1-219ENST00000549678 Q6ZRP5 223 aa4.58□□□□□ -1.68
PTCH1-219ENST00000549678 HSPB8Q9UJY1 196 aa4.58□□□□□ -1.68
PTCH1-219ENST00000549678 C11orf86A6NJI1 115 aa4.57□□□□□ -1.68
PTCH1-219ENST00000549678 PHF5AQ7RTV0 110 aaKnown RBP4.57□□□□□ -1.68
PTCH1-219ENST00000549678 TRAV12-1A0A0B4J245 112 aa4.56□□□□□ -1.68
PTCH1-219ENST00000549678 A0A1W2PNN7 141 aa4.56□□□□□ -1.68
PTCH1-219ENST00000549678 FAM168BA1KXE4 195 aa4.56□□□□□ -1.68
PTCH1-219ENST00000549678 M0QXV9 152 aa4.56□□□□□ -1.68
PTCH1-219ENST00000549678 S100A1P23297 94 aa4.56□□□□□ -1.68
PTCH1-219ENST00000549678 PFN2P35080 140 aa4.56□□□□□ -1.68
PTCH1-219ENST00000549678 PRR3P79522 188 aaKnown RBP4.56□□□□□ -1.68
PTCH1-219ENST00000549678 MAP1LC3CQ9BXW4 147 aa4.56□□□□□ -1.68
PTCH1-219ENST00000549678 XAGE1AQ9HD64 81 aa4.56□□□□□ -1.68
PTCH1-219ENST00000549678 HERVK_113P61574 105 aa4.55□□□□□ -1.68
PTCH1-219ENST00000549678 MEIG1Q5JSS6 88 aa4.55□□□□□ -1.68
PTCH1-219ENST00000549678 C1orf137Q5JT78 98 aa4.55□□□□□ -1.68
PTCH1-219ENST00000549678 SFTA2Q6UW10 78 aa4.55□□□□□ -1.68
PTCH1-219ENST00000549678 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
PTCH1-219ENST00000549678 LRP2P98164 4655 aa4.54□□□□□ -1.68
PTCH1-219ENST00000549678 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
PTCH1-219ENST00000549678 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 TMEM223A0PJW6 202 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BKO60814 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BJP06899 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BOP23527 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 PLNP26678 52 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BBP33778 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HNRNPA3P51991 378 aaKnown RBP4.53□□□□□ -1.68
PTCH1-219ENST00000549678 LINC00158P58513 81 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BDP58876 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BCP62807 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST2H2BEQ16778 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 LBHQ53QV2 105 aaPredicted RBP4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.53□□□□□ -1.68
PTCH1-219ENST00000549678 C9orf129Q5T035 196 aaKnown RBP4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BHQ93079 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BNQ99877 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 HIST1H2BMQ99879 126 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 PSORS1C2Q9UIG4 136 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 ERG28Q9UKR5 140 aa4.53□□□□□ -1.68
PTCH1-219ENST00000549678 A0A0U1RRA0 63 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 NUPR1O60356 82 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 DPM2O94777 84 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 IGKCP01834 107 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 LINC00310P59036 64 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 ODF1Q14990 250 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 REG3GQ6UW15 175 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 SPINK6Q6UWN8 80 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 PMCHL2Q9BQD1 86 aa4.52□□□□□ -1.69
PTCH1-219ENST00000549678 MYMXA0A1B0GTQ4 84 aa4.51□□□□□ -1.69
PTCH1-219ENST00000549678 LGALS3P17931 250 aaKnown RBP4.51□□□□□ -1.69
PTCH1-219ENST00000549678 RPL24P83731 157 aaKnown RBP4.51□□□□□ -1.69
PTCH1-219ENST00000549678 COX17Q14061 63 aa4.51□□□□□ -1.69
PTCH1-219ENST00000549678 MRPL55Q7Z7F7 128 aaKnown RBP4.51□□□□□ -1.69
PTCH1-219ENST00000549678 PLA2G2DQ9UNK4 145 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms