RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 IGLV3-1P01715 115 aa2.16□□□□□ -2.06
PRDM4-204ENST00000549416 MGPP08493 103 aa2.16□□□□□ -2.06
PRDM4-204ENST00000549416 DEFB134Q4QY38 66 aa2.16□□□□□ -2.06
PRDM4-204ENST00000549416 KLK9Q9UKQ9 250 aa2.16□□□□□ -2.06
PRDM4-204ENST00000549416 CCL26Q9Y258 94 aa2.16□□□□□ -2.06
PRDM4-204ENST00000549416 LINC01558Q9Y6Z2 57 aa2.16□□□□□ -2.06
PRDM4-204ENST00000549416 TRBV30A0A0K0K1B3 111 aa2.15□□□□□ -2.07
PRDM4-204ENST00000549416 CTXND1A0A1B0GTU2 59 aa2.15□□□□□ -2.07
PRDM4-204ENST00000549416 M0R3E3 92 aa2.15□□□□□ -2.07
PRDM4-204ENST00000549416 HRES1P13985 223 aa2.15□□□□□ -2.07
PRDM4-204ENST00000549416 BRD3OSQ6XYD6 125 aa2.15□□□□□ -2.07
PRDM4-204ENST00000549416 TTTY12Q9BZ98 90 aa2.15□□□□□ -2.07
PRDM4-204ENST00000549416 CMC2Q9NRP2 79 aa2.15□□□□□ -2.07
PRDM4-204ENST00000549416 NUMA1Q14980 2115 aa2.15□□□□□ -2.07
PRDM4-204ENST00000549416 PLXNB2O15031 1838 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 TSC2P49815 1807 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 GBF1Q92538 1859 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 IGKV3OR2-268A0A0C4DH90 116 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 M0R135 149 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 HMGA1P17096 107 aaKnown RBP2.14□□□□□ -2.07
PRDM4-204ENST00000549416 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
PRDM4-204ENST00000549416 GDF5OSQ5U4N7 250 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 DEFB123Q8N688 67 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 LINC00846Q9NV44 126 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 V9GYV3 84 aa2.14□□□□□ -2.07
PRDM4-204ENST00000549416 BAZ2BQ9UIF8 2168 aaKnown RBP2.14□□□□□ -2.07
PRDM4-204ENST00000549416 GOLGB1Q14789 3259 aaKnown RBP2.13□□□□□ -2.07
PRDM4-204ENST00000549416 H0Y9P7 68 aa2.13□□□□□ -2.07
PRDM4-204ENST00000549416 COX17Q14061 63 aa2.13□□□□□ -2.07
PRDM4-204ENST00000549416 NREPQ16612 68 aa2.13□□□□□ -2.07
PRDM4-204ENST00000549416 HCP5Q6MZN7 132 aa2.13□□□□□ -2.07
PRDM4-204ENST00000549416 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
PRDM4-204ENST00000549416 WFDC10AQ9H1F0 79 aa2.13□□□□□ -2.07
PRDM4-204ENST00000549416 MICAL3Q7RTP6 2002 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 IGKV2-40A0A087WW87 121 aaPredicted RBP2.12□□□□□ -2.07
PRDM4-204ENST00000549416 A0A0G2JQZ4 141 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 IGKV2D-40P01614 121 aaPredicted RBP2.12□□□□□ -2.07
PRDM4-204ENST00000549416 IFI6P09912 130 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 FCER1GP30273 86 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 DEFB103AP81534 67 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 C10orf55Q5SWW7 151 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 TMEM263Q8WUH6 116 aaKnown RBP2.12□□□□□ -2.07
PRDM4-204ENST00000549416 LINC00208Q96KT6 92 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 PLAC8Q9NZF1 115 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 DOCK11Q5JSL3 2073 aa2.12□□□□□ -2.07
PRDM4-204ENST00000549416 CUL9Q8IWT3 2517 aa2.11□□□□□ -2.07
PRDM4-204ENST00000549416 A0A1W2PNN7 141 aa2.11□□□□□ -2.07
PRDM4-204ENST00000549416 TPRXLQ17RH7 258 aa2.11□□□□□ -2.07
PRDM4-204ENST00000549416 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
PRDM4-204ENST00000549416 TXNDC17Q9BRA2 123 aa2.11□□□□□ -2.07
PRDM4-204ENST00000549416 TMEM14CQ9P0S9 112 aa2.11□□□□□ -2.07
PRDM4-204ENST00000549416 ABRACLQ9P1F3 81 aa2.11□□□□□ -2.07
PRDM4-204ENST00000549416 FREM3P0C091 2139 aa2.11□□□□□ -2.07
PRDM4-204ENST00000549416 MED13Q9UHV7 2174 aa2.1□□□□□ -2.07
PRDM4-204ENST00000549416 IL9P15248 144 aa2.1□□□□□ -2.07
PRDM4-204ENST00000549416 ZNF137PP52743 207 aa2.1□□□□□ -2.07
PRDM4-204ENST00000549416 FXYD3Q14802 87 aa2.1□□□□□ -2.07
PRDM4-204ENST00000549416 SPACA4Q8TDM5 124 aa2.1□□□□□ -2.07
PRDM4-204ENST00000549416 MYOFQ9NZM1 2061 aa2.1□□□□□ -2.07
PRDM4-204ENST00000549416 A0A087WTM6 91 aa2.09□□□□□ -2.07
PRDM4-204ENST00000549416 TRAV21A0A0B4J279 112 aa2.09□□□□□ -2.07
PRDM4-204ENST00000549416 NBDYA0A0U1RRE5 68 aa2.09□□□□□ -2.07
PRDM4-204ENST00000549416 IGKV2-29A2NJV5 120 aaPredicted RBP2.09□□□□□ -2.07
PRDM4-204ENST00000549416 DEFB106AQ8N104 65 aa2.09□□□□□ -2.07
PRDM4-204ENST00000549416 WFDC6Q9BQY6 131 aa2.09□□□□□ -2.07
PRDM4-204ENST00000549416 UBL5Q9BZL1 73 aa2.09□□□□□ -2.07
PRDM4-204ENST00000549416 BPTFQ12830 3046 aa2.08□□□□□ -2.08
PRDM4-204ENST00000549416 UTRNP46939 3433 aa2.08□□□□□ -2.08
PRDM4-204ENST00000549416 LCE6AA0A183 80 aa2.08□□□□□ -2.08
PRDM4-204ENST00000549416 J3QRE1 110 aa2.08□□□□□ -2.08
PRDM4-204ENST00000549416 RNASE3P12724 160 aaKnown RBP2.08□□□□□ -2.08
PRDM4-204ENST00000549416 LINC00322Q6ZN03 302 aaPredicted RBP2.08□□□□□ -2.08
PRDM4-204ENST00000549416 WFDC9Q8NEX5 89 aa2.08□□□□□ -2.08
PRDM4-204ENST00000549416 SPRR4Q96PI1 79 aa2.08□□□□□ -2.08
PRDM4-204ENST00000549416 ANKRD36A6QL64 1941 aa2.08□□□□□ -2.08
PRDM4-204ENST00000549416 TRAV1-2A0A0B4J238 106 aa2.07□□□□□ -2.08
PRDM4-204ENST00000549416 TRGV4A0A0C4DH28 118 aa2.07□□□□□ -2.08
PRDM4-204ENST00000549416 TRBV6-1A0A0K0K1D8 114 aa2.07□□□□□ -2.08
PRDM4-204ENST00000549416 PLNP26678 52 aa2.07□□□□□ -2.08
PRDM4-204ENST00000549416 C10orf113Q5VZT2 155 aa2.07□□□□□ -2.08
PRDM4-204ENST00000549416 SPATA8Q6RVD6 105 aa2.07□□□□□ -2.08
PRDM4-204ENST00000549416 C5orf56Q8N8D9 126 aa2.07□□□□□ -2.08
PRDM4-204ENST00000549416 TNRC6BQ9UPQ9 1833 aaKnown RBP2.07□□□□□ -2.08
PRDM4-204ENST00000549416 MPDZO75970 2070 aa2.06□□□□□ -2.08
PRDM4-204ENST00000549416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.06□□□□□ -2.08
PRDM4-204ENST00000549416 IGKV2-24A0A0C4DH68 120 aa2.06□□□□□ -2.08
PRDM4-204ENST00000549416 SPINK7P58062 85 aa2.06□□□□□ -2.08
PRDM4-204ENST00000549416 ENHOQ6UWT2 76 aa2.06□□□□□ -2.08
PRDM4-204ENST00000549416 HEATR5BQ9P2D3 2071 aa2.05□□□□□ -2.08
PRDM4-204ENST00000549416 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
PRDM4-204ENST00000549416 LOC110117498A0A087WWA1 95 aa2.05□□□□□ -2.08
PRDM4-204ENST00000549416 H3BRN7 92 aa2.05□□□□□ -2.08
PRDM4-204ENST00000549416 IGLV6-57P01721 117 aa2.05□□□□□ -2.08
PRDM4-204ENST00000549416 GAFA1Q96PS6 74 aa2.05□□□□□ -2.08
PRDM4-204ENST00000549416 TRGV1A0A0A0MS02 117 aa2.04□□□□□ -2.08
PRDM4-204ENST00000549416 SMIM27A0A1W2PRY6 76 aa2.04□□□□□ -2.08
PRDM4-204ENST00000549416 INE1O15225 51 aa2.04□□□□□ -2.08
PRDM4-204ENST00000549416 SERF2P84101 59 aa2.04□□□□□ -2.08
PRDM4-204ENST00000549416 DEFB112Q30KQ8 113 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms