RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 C9orf118A6NHY6 69 aa5.38□□□□□ -1.55
DEPDC4-207ENST00000549249 J3QQQ9 107 aa5.38□□□□□ -1.55
DEPDC4-207ENST00000549249 BOD1L2Q8IYS8 172 aa5.38□□□□□ -1.55
DEPDC4-207ENST00000549249 LINC01561Q8N1V8 128 aa5.38□□□□□ -1.55
DEPDC4-207ENST00000549249 PLEKHB2Q96CS7 222 aa5.38□□□□□ -1.55
DEPDC4-207ENST00000549249 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
DEPDC4-207ENST00000549249 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
DEPDC4-207ENST00000549249 KMT2AQ03164 3969 aa5.38□□□□□ -1.55
DEPDC4-207ENST00000549249 ALMS1Q8TCU4 4167 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 IGKV2D-24A0A075B6R9 120 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 NBDYA0A0U1RRE5 68 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 TSTD3H0UI37 97 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 K7EP13 123 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 COX7A2LO14548 114 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 SLC25A34Q6PIV7 304 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 C2orf91Q6ZV80 131 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 LINC00476Q8WZB0 136 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 MIEN1Q9BRT3 115 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 UQCR10Q9UDW1 63 aa5.37□□□□□ -1.55
DEPDC4-207ENST00000549249 MYMXA0A1B0GTQ4 84 aa5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 ZNF815PA8K554 130 aa5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 DLEU1O43261 78 aa5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 LGALS3P17931 250 aaKnown RBP5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 KIAA0087Q14695 138 aa5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 TTC32Q5I0X7 151 aa5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 C15orf56Q8N910 161 aa5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 COX7B2Q8TF08 81 aa5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 VPS13DQ5THJ4 4388 aa5.36□□□□□ -1.55
DEPDC4-207ENST00000549249 PCP4L1A6NKN8 68 aa5.35□□□□□ -1.55
DEPDC4-207ENST00000549249 MALP21145 153 aa5.35□□□□□ -1.55
DEPDC4-207ENST00000549249 Q6ZR54 194 aa5.35□□□□□ -1.55
DEPDC4-207ENST00000549249 Q8IZM0 81 aa5.35□□□□□ -1.55
DEPDC4-207ENST00000549249 ORAOV1Q8WV07 137 aa5.35□□□□□ -1.55
DEPDC4-207ENST00000549249 ZNF625Q96I27 306 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-207ENST00000549249 TOMM7Q9P0U1 55 aa5.35□□□□□ -1.55
DEPDC4-207ENST00000549249 NDUFA12Q9UI09 145 aa5.35□□□□□ -1.55
DEPDC4-207ENST00000549249 ZNF561-AS1K7EIQ3 104 aa5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 M0R2N4 97 aa5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 NDUFA1O15239 70 aa5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 LY6G6CO95867 125 aa5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 DDTP30046 118 aa5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 SPAG11BQ08648 103 aa5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 WFDC2Q14508 124 aa5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 Q6ZRN7 208 aaPredicted RBP5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 RMI2Q96E14 147 aa5.34□□□□□ -1.55
DEPDC4-207ENST00000549249 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-207ENST00000549249 APOMO95445 188 aa5.33□□□□□ -1.56
DEPDC4-207ENST00000549249 HNRNPA3P51991 378 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-207ENST00000549249 HIGD2BQ4VC39 106 aa5.33□□□□□ -1.56
DEPDC4-207ENST00000549249 C6orf223Q8N319 242 aa5.33□□□□□ -1.56
DEPDC4-207ENST00000549249 LINC00526Q96FQ7 95 aa5.33□□□□□ -1.56
DEPDC4-207ENST00000549249 A0A0J9YXY3 114 aa5.32□□□□□ -1.56
DEPDC4-207ENST00000549249 LINC00587B1AMM8 73 aa5.32□□□□□ -1.56
DEPDC4-207ENST00000549249 USP17L23D6RBM5 183 aa5.32□□□□□ -1.56
DEPDC4-207ENST00000549249 C2orf82Q6UX34 121 aa5.32□□□□□ -1.56
DEPDC4-207ENST00000549249 LITAFQ99732 161 aa5.32□□□□□ -1.56
DEPDC4-207ENST00000549249 HIGD1BQ9P298 99 aa5.32□□□□□ -1.56
DEPDC4-207ENST00000549249 GVQW2A0A096LPI5 108 aaPredicted RBP5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 LECT2O14960 151 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 PRSS2P07478 247 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 CTAG1AP78358 180 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 C6orf226Q5I0X4 101 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 C10orf25Q5T742 122 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 CFAP161Q6P656 301 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 UNQ6190/PRO20217Q6UXQ8 127 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 NTN5Q8WTR8 489 aaPredicted RBP5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 TM2D2Q9BX73 214 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 COX11Q9Y6N1 276 aa5.31□□□□□ -1.56
DEPDC4-207ENST00000549249 LRCOL1A6NCL2 159 aa5.3□□□□□ -1.56
DEPDC4-207ENST00000549249 CXCL5P42830 114 aa5.3□□□□□ -1.56
DEPDC4-207ENST00000549249 HERV-K104P63124 156 aa5.3□□□□□ -1.56
DEPDC4-207ENST00000549249 ADAMTSL4-AS1Q5T5F5 129 aa5.3□□□□□ -1.56
DEPDC4-207ENST00000549249 SCGB1D4Q6XE38 83 aa5.3□□□□□ -1.56
DEPDC4-207ENST00000549249 PSCAO43653 123 aa5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 TIMM17BO60830 172 aa5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 SLPIP03973 132 aa5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 Q6ZRU5 148 aa5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 C2orf48Q96LS8 159 aa5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 SPANXB1Q9NS25 103 aaPredicted RBP5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 C6orf48Q9UBA6 75 aa5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 HYDINQ4G0P3 5121 aa5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 DNAH10Q8IVF4 4471 aa5.29□□□□□ -1.56
DEPDC4-207ENST00000549249 A0A0U1RRA0 63 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 SMIM13P0DJ93 91 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 CKS1BP61024 79 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 HSD52Q0P140 79 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 C9orf116Q5BN46 136 aaPredicted RBP5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 MEIG1Q5JSS6 88 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 DAND5Q8N907 189 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 SPANXDQ9BXN6 97 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 SPANXCQ9NY87 97 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 ERG28Q9UKR5 140 aa5.28□□□□□ -1.56
DEPDC4-207ENST00000549249 TMEM238C9JI98 176 aa5.27□□□□□ -1.57
DEPDC4-207ENST00000549249 HINT1P49773 126 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-207ENST00000549249 SFTA2Q6UW10 78 aa5.27□□□□□ -1.57
DEPDC4-207ENST00000549249 SOSTDC1Q6X4U4 206 aa5.27□□□□□ -1.57
DEPDC4-207ENST00000549249 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
DEPDC4-207ENST00000549249 HIST1H4GQ99525 98 aa5.27□□□□□ -1.57
DEPDC4-207ENST00000549249 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
DEPDC4-207ENST00000549249 FRAS1Q86XX4 4008 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms