RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 ATP5EP2Q5VTU8 51 aa16.11■□□□□ 0.17
NPAS3-206ENST00000548645 MXRA5Q9NR99 2828 aa16.11■□□□□ 0.17
NPAS3-206ENST00000548645 MYO9AB2RTY4 2548 aa16.11■□□□□ 0.17
NPAS3-206ENST00000548645 NOTCH3Q9UM47 2321 aa16.09■□□□□ 0.17
NPAS3-206ENST00000548645 CMC4P56277 68 aaPredicted RBP16.08■□□□□ 0.17
NPAS3-206ENST00000548645 FHL2Q14192 279 aa16.08■□□□□ 0.17
NPAS3-206ENST00000548645 KIR2DL5BQ8NHK3 375 aa16.08■□□□□ 0.17
NPAS3-206ENST00000548645 TMEM256-PLSCR3K7ERE1 68 aa16.08■□□□□ 0.16
NPAS3-206ENST00000548645 Q8N814 137 aa16.08■□□□□ 0.16
NPAS3-206ENST00000548645 HELZ2Q9BYK8 2649 aaKnown RBP16.07■□□□□ 0.16
NPAS3-206ENST00000548645 ANKRD17O75179 2603 aaKnown RBP16.07■□□□□ 0.16
NPAS3-206ENST00000548645 CCL24O00175 119 aa16.07■□□□□ 0.16
NPAS3-206ENST00000548645 Q8IZM0 81 aa16.07■□□□□ 0.16
NPAS3-206ENST00000548645 C11orf44Q8N8P7 122 aa16.07■□□□□ 0.16
NPAS3-206ENST00000548645 A0A1W2PRX2 142 aa16.06■□□□□ 0.16
NPAS3-206ENST00000548645 NAV2Q8IVL1 2488 aa16.06■□□□□ 0.16
NPAS3-206ENST00000548645 TENM4Q6N022 2769 aa16.05■□□□□ 0.16
NPAS3-206ENST00000548645 XCL1P47992 114 aa16.05■□□□□ 0.16
NPAS3-206ENST00000548645 WNK1Q9H4A3 2382 aa16.04■□□□□ 0.16
NPAS3-206ENST00000548645 RPL35AP18077 110 aaKnown RBP16.04■□□□□ 0.16
NPAS3-206ENST00000548645 NANOS2P60321 138 aaKnown RBP16.04■□□□□ 0.16
NPAS3-206ENST00000548645 HILS1P60008 231 aa16.03■□□□□ 0.16
NPAS3-206ENST00000548645 GHRHP01286 108 aa16.03■□□□□ 0.16
NPAS3-206ENST00000548645 DSCR8Q96T75 97 aa16.02■□□□□ 0.16
NPAS3-206ENST00000548645 LYPD5Q6UWN5 251 aa16.01■□□□□ 0.15
NPAS3-206ENST00000548645 PLA2G2AP14555 144 aa16.01■□□□□ 0.15
NPAS3-206ENST00000548645 NDUFC2O95298 119 aa16.01■□□□□ 0.15
NPAS3-206ENST00000548645 CSNK1G2-AS1Q8NCQ2 148 aa16■□□□□ 0.15
NPAS3-206ENST00000548645 UBL5Q9BZL1 73 aa16■□□□□ 0.15
NPAS3-206ENST00000548645 WFDC10AQ9H1F0 79 aa16■□□□□ 0.15
NPAS3-206ENST00000548645 CCDC168Q8NDH2 2452 aa16■□□□□ 0.15
NPAS3-206ENST00000548645 TRBV10-3A0A0K0K1G6 114 aa15.99■□□□□ 0.15
NPAS3-206ENST00000548645 PRR3P79522 188 aaKnown RBP15.99■□□□□ 0.15
NPAS3-206ENST00000548645 WFDC9Q8NEX5 89 aa15.99■□□□□ 0.15
NPAS3-206ENST00000548645 CR1P17927 2039 aa15.99■□□□□ 0.15
NPAS3-206ENST00000548645 TRAV23DV6A0A075B6W5 121 aa15.99■□□□□ 0.15
NPAS3-206ENST00000548645 NBPF19A0A087WUL8 3843 aa15.99■□□□□ 0.15
NPAS3-206ENST00000548645 ENHOQ6UWT2 76 aa15.98■□□□□ 0.15
NPAS3-206ENST00000548645 A0A1B0GUV1 79 aa15.98■□□□□ 0.15
NPAS3-206ENST00000548645 FAM19A1Q7Z5A9 133 aa15.98■□□□□ 0.15
NPAS3-206ENST00000548645 NDUFC2-KCTD14E9PQ53 114 aa15.97■□□□□ 0.15
NPAS3-206ENST00000548645 KMT2BQ9UMN6 2715 aaPredicted RBP15.96■□□□□ 0.15
NPAS3-206ENST00000548645 COX17Q14061 63 aa15.96■□□□□ 0.15
NPAS3-206ENST00000548645 OXTP01178 125 aa15.95■□□□□ 0.14
NPAS3-206ENST00000548645 TLN2Q9Y4G6 2542 aa15.94■□□□□ 0.14
NPAS3-206ENST00000548645 RNASE1P07998 156 aaKnown RBP15.93■□□□□ 0.14
NPAS3-206ENST00000548645 C19orf73Q9NVV2 129 aa15.93■□□□□ 0.14
NPAS3-206ENST00000548645 GYPEP15421 78 aa15.93■□□□□ 0.14
NPAS3-206ENST00000548645 CLPSL2Q6UWE3 100 aa15.93■□□□□ 0.14
NPAS3-206ENST00000548645 APCP25054 2843 aa15.92■□□□□ 0.14
NPAS3-206ENST00000548645 DEFB130BP0DP73 79 aa15.92■□□□□ 0.14
NPAS3-206ENST00000548645 DEFB130AP0DP74 79 aa15.92■□□□□ 0.14
NPAS3-206ENST00000548645 C6orf99Q4VX62 202 aa15.91■□□□□ 0.14
NPAS3-206ENST00000548645 FASNP49327 2511 aaKnown RBP15.91■□□□□ 0.14
NPAS3-206ENST00000548645 KIAA0087Q14695 138 aa15.9■□□□□ 0.14
NPAS3-206ENST00000548645 JMJD1CQ15652 2540 aa15.9■□□□□ 0.14
NPAS3-206ENST00000548645 KRTAP10-9P60411 292 aa15.89■□□□□ 0.13
NPAS3-206ENST00000548645 RBM3P98179 157 aaKnown RBP15.88■□□□□ 0.13
NPAS3-206ENST00000548645 TEX15Q9BXT5 2789 aa15.88■□□□□ 0.13
NPAS3-206ENST00000548645 DNAJC9-AS1A6NH13 148 aa15.88■□□□□ 0.13
NPAS3-206ENST00000548645 IGLV1-51P01701 117 aa15.88■□□□□ 0.13
NPAS3-206ENST00000548645 LINC00575Q6W349 94 aa15.88■□□□□ 0.13
NPAS3-206ENST00000548645 C20orf197Q8N268 126 aa15.88■□□□□ 0.13
NPAS3-206ENST00000548645 CD164L2Q6UWJ8 174 aa15.87■□□□□ 0.13
NPAS3-206ENST00000548645 IGHV4-28A0A0C4DH34 117 aa15.87■□□□□ 0.13
NPAS3-206ENST00000548645 Q6ZQT0 140 aa15.87■□□□□ 0.13
NPAS3-206ENST00000548645 BCE1O60756 84 aa15.86■□□□□ 0.13
NPAS3-206ENST00000548645 NOTCH2Q04721 2471 aa15.86■□□□□ 0.13
NPAS3-206ENST00000548645 ZNF561-AS1K7EIQ3 104 aa15.85■□□□□ 0.13
NPAS3-206ENST00000548645 LOC110117498A0A087WWA1 95 aa15.85■□□□□ 0.13
NPAS3-206ENST00000548645 ITPR2Q14571 2701 aa15.85■□□□□ 0.13
NPAS3-206ENST00000548645 DEFB113Q30KQ7 82 aa15.84■□□□□ 0.13
NPAS3-206ENST00000548645 LINC00612Q8N6U2 182 aa15.84■□□□□ 0.13
NPAS3-206ENST00000548645 HECTD1Q9ULT8 2610 aa15.83■□□□□ 0.13
NPAS3-206ENST00000548645 SETXQ7Z333 2677 aaKnown RBP15.83■□□□□ 0.13
NPAS3-206ENST00000548645 WIPF1O43516 503 aa15.83■□□□□ 0.12
NPAS3-206ENST00000548645 C9orf116Q5BN46 136 aaPredicted RBP15.83■□□□□ 0.12
NPAS3-206ENST00000548645 GCN1Q92616 2671 aaKnown RBP15.83■□□□□ 0.12
NPAS3-206ENST00000548645 LINC00269Q8N2A0 174 aa15.83■□□□□ 0.12
NPAS3-206ENST00000548645 LAMTOR3Q9UHA4 124 aa15.83■□□□□ 0.12
NPAS3-206ENST00000548645 C4orf26Q17RF5 130 aa15.82■□□□□ 0.12
NPAS3-206ENST00000548645 Q5XG85 94 aa15.82■□□□□ 0.12
NPAS3-206ENST00000548645 CHCHD10Q8WYQ3 142 aaPredicted RBP15.82■□□□□ 0.12
NPAS3-206ENST00000548645 TRAV7A0A075B6U4 112 aa15.81■□□□□ 0.12
NPAS3-206ENST00000548645 C6orf223Q8N319 242 aa15.81■□□□□ 0.12
NPAS3-206ENST00000548645 PRO0255Q9UI72 69 aa15.81■□□□□ 0.12
NPAS3-206ENST00000548645 AKAP9Q99996 3911 aa15.81■□□□□ 0.12
NPAS3-206ENST00000548645 A0A096LPF7 62 aa15.8■□□□□ 0.12
NPAS3-206ENST00000548645 FAM236DA0A1B0GTK5 79 aa15.8■□□□□ 0.12
NPAS3-206ENST00000548645 FAM236CP0DP71 79 aa15.8■□□□□ 0.12
NPAS3-206ENST00000548645 Q8NDZ9 215 aa15.8■□□□□ 0.12
NPAS3-206ENST00000548645 SONP18583 2426 aaKnown RBP15.79■□□□□ 0.12
NPAS3-206ENST00000548645 LINC01547P58512 204 aaPredicted RBP15.78■□□□□ 0.12
NPAS3-206ENST00000548645 IGLV10-54A0A075B6I4 117 aa15.78■□□□□ 0.12
NPAS3-206ENST00000548645 HAMPP81172 84 aa15.77■□□□□ 0.11
NPAS3-206ENST00000548645 ESM1Q9NQ30 184 aa15.77■□□□□ 0.11
NPAS3-206ENST00000548645 ZNF469Q96JG9 3925 aaPredicted RBP15.76■□□□□ 0.11
NPAS3-206ENST00000548645 CUBNO60494 3623 aa15.76■□□□□ 0.11
NPAS3-206ENST00000548645 PDE6GP18545 87 aa15.76■□□□□ 0.11
NPAS3-206ENST00000548645 HRCT1Q6UXD1 115 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms