RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 K7EP13 123 aa-1.43□□□□□ -2.64
DEPDC4-205ENST00000548313 ATP5EP56381 51 aaPredicted RBP-1.43□□□□□ -2.64
DEPDC4-205ENST00000548313 C1orf54Q8WWF1 131 aa-1.43□□□□□ -2.64
DEPDC4-205ENST00000548313 TSC22D3Q99576 134 aa-1.43□□□□□ -2.64
DEPDC4-205ENST00000548313 XRN1Q8IZH2 1706 aaKnown RBP-1.43□□□□□ -2.64
DEPDC4-205ENST00000548313 FMN2Q9NZ56 1722 aa-1.43□□□□□ -2.64
DEPDC4-205ENST00000548313 FASNP49327 2511 aaKnown RBP-1.43□□□□□ -2.64
DEPDC4-205ENST00000548313 AKAIN1P0CW23 69 aa-1.44□□□□□ -2.64
DEPDC4-205ENST00000548313 SCN7AQ01118 1682 aa-1.45□□□□□ -2.64
DEPDC4-205ENST00000548313 S100A12P80511 92 aa-1.46□□□□□ -2.64
DEPDC4-205ENST00000548313 PP6455Q8WZ26 134 aa-1.46□□□□□ -2.64
DEPDC4-205ENST00000548313 LAMA2P24043 3122 aaKnown RBP-1.46□□□□□ -2.64
DEPDC4-205ENST00000548313 NUP188Q5SRE5 1749 aa-1.46□□□□□ -2.64
DEPDC4-205ENST00000548313 CUL7Q14999 1698 aa-1.47□□□□□ -2.64
DEPDC4-205ENST00000548313 ADGRL2O95490 1459 aa-1.47□□□□□ -2.64
DEPDC4-205ENST00000548313 MRC2Q9UBG0 1479 aa-1.47□□□□□ -2.64
DEPDC4-205ENST00000548313 F6UZH7 168 aa-1.47□□□□□ -2.64
DEPDC4-205ENST00000548313 GNG11P61952 73 aa-1.47□□□□□ -2.64
DEPDC4-205ENST00000548313 DEFB135Q30KP9 77 aa-1.47□□□□□ -2.64
DEPDC4-205ENST00000548313 C9orf153Q5TBE3 101 aa-1.47□□□□□ -2.64
DEPDC4-205ENST00000548313 APLNQ9ULZ1 77 aa-1.47□□□□□ -2.64
DEPDC4-205ENST00000548313 MUC17Q685J3 4493 aa-1.47□□□□□ -2.65
DEPDC4-205ENST00000548313 CCDC141Q6ZP82 1450 aa-1.48□□□□□ -2.65
DEPDC4-205ENST00000548313 COX6CP09669 75 aa-1.48□□□□□ -2.65
DEPDC4-205ENST00000548313 PAPPA2Q9BXP8 1791 aa-1.49□□□□□ -2.65
DEPDC4-205ENST00000548313 A0A1B0GWA3 101 aa-1.49□□□□□ -2.65
DEPDC4-205ENST00000548313 CPSF4LA6NMK7 179 aaKnown RBP-1.49□□□□□ -2.65
DEPDC4-205ENST00000548313 UBE2D3P61077 147 aa-1.49□□□□□ -2.65
DEPDC4-205ENST00000548313 UBE2D2P62837 147 aa-1.49□□□□□ -2.65
DEPDC4-205ENST00000548313 LCN9Q8WX39 176 aa-1.49□□□□□ -2.65
DEPDC4-205ENST00000548313 DPH3P1Q9H4G8 78 aa-1.49□□□□□ -2.65
DEPDC4-205ENST00000548313 PKHD1L1Q86WI1 4243 aa-1.5□□□□□ -2.65
DEPDC4-205ENST00000548313 FAM24AA6NFZ4 105 aa-1.5□□□□□ -2.65
DEPDC4-205ENST00000548313 Q0VG73 95 aa-1.5□□□□□ -2.65
DEPDC4-205ENST00000548313 MANBALQ9NQG1 85 aa-1.5□□□□□ -2.65
DEPDC4-205ENST00000548313 SONP18583 2426 aaKnown RBP-1.5□□□□□ -2.65
DEPDC4-205ENST00000548313 DNAH3Q8TD57 4116 aa-1.51□□□□□ -2.65
DEPDC4-205ENST00000548313 TRAPPC2P0DI81 140 aa-1.51□□□□□ -2.65
DEPDC4-205ENST00000548313 TRAPPC2BP0DI82 140 aa-1.51□□□□□ -2.65
DEPDC4-205ENST00000548313 SCAPERQ9BY12 1400 aa-1.51□□□□□ -2.65
DEPDC4-205ENST00000548313 TACC2O95359 2948 aa-1.52□□□□□ -2.65
DEPDC4-205ENST00000548313 FAM223BA6NKX1 122 aa-1.52□□□□□ -2.65
DEPDC4-205ENST00000548313 SEC11AP67812 179 aa-1.52□□□□□ -2.65
DEPDC4-205ENST00000548313 FAM107BQ9H098 131 aa-1.52□□□□□ -2.65
DEPDC4-205ENST00000548313 LINC00846Q9NV44 126 aa-1.52□□□□□ -2.65
DEPDC4-205ENST00000548313 PRO1854Q9UHT4 67 aa-1.52□□□□□ -2.65
DEPDC4-205ENST00000548313 TOP2BQ02880 1626 aa-1.52□□□□□ -2.65
DEPDC4-205ENST00000548313 MYOM2P54296 1465 aa-1.53□□□□□ -2.65
DEPDC4-205ENST00000548313 MYO18BQ8IUG5 2567 aa-1.53□□□□□ -2.65
DEPDC4-205ENST00000548313 PLEKHH2Q8IVE3 1493 aa-1.53□□□□□ -2.65
DEPDC4-205ENST00000548313 NALCNQ8IZF0 1738 aa-1.54□□□□□ -2.66
DEPDC4-205ENST00000548313 RYR2Q92736 4967 aa-1.54□□□□□ -2.66
DEPDC4-205ENST00000548313 NAP1L6A6NFF2 107 aa-1.54□□□□□ -2.66
DEPDC4-205ENST00000548313 SAA2P0DJI9 122 aaPredicted RBP-1.54□□□□□ -2.66
DEPDC4-205ENST00000548313 NLRP1Q9C000 1473 aa-1.55□□□□□ -2.66
DEPDC4-205ENST00000548313 PKD1P98161 4303 aa-1.55□□□□□ -2.66
DEPDC4-205ENST00000548313 HMGN1P05114 100 aa-1.55□□□□□ -2.66
DEPDC4-205ENST00000548313 C12orf57Q99622 126 aa-1.55□□□□□ -2.66
DEPDC4-205ENST00000548313 NKTRP30414 1462 aaKnown RBP-1.56□□□□□ -2.66
DEPDC4-205ENST00000548313 ROCK2O75116 1388 aaKnown RBP-1.56□□□□□ -2.66
DEPDC4-205ENST00000548313 SFTA2Q6UW10 78 aa-1.56□□□□□ -2.66
DEPDC4-205ENST00000548313 MARF1Q9Y4F3 1742 aaKnown RBP-1.57□□□□□ -2.66
DEPDC4-205ENST00000548313 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.58□□□□□ -2.66
DEPDC4-205ENST00000548313 SNAPC5O75971 98 aa-1.58□□□□□ -2.66
DEPDC4-205ENST00000548313 IER3IP1Q9Y5U9 82 aa-1.58□□□□□ -2.66
DEPDC4-205ENST00000548313 TNRC18O15417 2968 aaPredicted RBP-1.58□□□□□ -2.66
DEPDC4-205ENST00000548313 A0A1B0GU69 56 aa-1.59□□□□□ -2.66
DEPDC4-205ENST00000548313 H1FX-AS1Q4G0G2 97 aa-1.59□□□□□ -2.66
DEPDC4-205ENST00000548313 CRIPTQ9P021 101 aa-1.59□□□□□ -2.66
DEPDC4-205ENST00000548313 EDC4Q6P2E9 1401 aaKnown RBP-1.59□□□□□ -2.66
DEPDC4-205ENST00000548313 PDCD11Q14690 1871 aaKnown RBP-1.6□□□□□ -2.67
DEPDC4-205ENST00000548313 C9orf62Q8N4C0 152 aa-1.6□□□□□ -2.67
DEPDC4-205ENST00000548313 DNAH2Q9P225 4427 aa-1.6□□□□□ -2.67
DEPDC4-205ENST00000548313 SPTBN4Q9H254 2564 aa-1.6□□□□□ -2.67
DEPDC4-205ENST00000548313 SVBPQ8N300 66 aa-1.61□□□□□ -2.67
DEPDC4-205ENST00000548313 SPRR2FQ96RM1 72 aa-1.61□□□□□ -2.67
DEPDC4-205ENST00000548313 REV3LO60673 3130 aa-1.61□□□□□ -2.67
DEPDC4-205ENST00000548313 VPS13DQ5THJ4 4388 aa-1.61□□□□□ -2.67
DEPDC4-205ENST00000548313 ARHGAP5Q13017 1502 aa-1.61□□□□□ -2.67
DEPDC4-205ENST00000548313 NRKQ7Z2Y5 1582 aa-1.62□□□□□ -2.67
DEPDC4-205ENST00000548313 FAT3Q8TDW7 4589 aa-1.62□□□□□ -2.67
DEPDC4-205ENST00000548313 I3L3M4 83 aa-1.62□□□□□ -2.67
DEPDC4-205ENST00000548313 MAPKBP1O60336 1514 aa-1.62□□□□□ -2.67
DEPDC4-205ENST00000548313 PLECQ15149 4684 aaKnown RBP-1.63□□□□□ -2.67
DEPDC4-205ENST00000548313 KIAA1551Q9HCM1 1747 aa-1.63□□□□□ -2.67
DEPDC4-205ENST00000548313 HTTP42858 3142 aa-1.63□□□□□ -2.67
DEPDC4-205ENST00000548313 CRYM-AS1A6NIL9 109 aa-1.63□□□□□ -2.67
DEPDC4-205ENST00000548313 TEP1Q99973 2627 aaKnown RBP-1.63□□□□□ -2.67
DEPDC4-205ENST00000548313 NIPBLQ6KC79 2804 aaeCLIP-1.63□□□□□ -2.67
DEPDC4-205ENST00000548313 H3BQ15 152 aa-1.64□□□□□ -2.67
DEPDC4-205ENST00000548313 GNG4P50150 75 aa-1.64□□□□□ -2.67
DEPDC4-205ENST00000548313 DEFB112Q30KQ8 113 aa-1.64□□□□□ -2.67
DEPDC4-205ENST00000548313 LRRC37AA6NMS7 1700 aa-1.64□□□□□ -2.67
DEPDC4-205ENST00000548313 A0A087WVE0 104 aa-1.65□□□□□ -2.67
DEPDC4-205ENST00000548313 RPL13AP3Q6NVV1 102 aa-1.65□□□□□ -2.67
DEPDC4-205ENST00000548313 C6orf201Q7Z4U5 140 aa-1.65□□□□□ -2.67
DEPDC4-205ENST00000548313 AKAP9Q99996 3911 aa-1.65□□□□□ -2.67
DEPDC4-205ENST00000548313 NBASA2RRP1 2371 aa-1.65□□□□□ -2.67
DEPDC4-205ENST00000548313 USP9XQ93008 2570 aaPredicted RBP-1.65□□□□□ -2.67
DEPDC4-205ENST00000548313 SPG11Q96JI7 2443 aa-1.66□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms