RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 PRSS2P07478 247 aa11.17□□□□□ -0.62
KRT4-201ENST00000548097 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
KRT4-201ENST00000548097 SNHG12Q9BXW3 62 aa11.17□□□□□ -0.62
KRT4-201ENST00000548097 EREGO14944 169 aa11.16□□□□□ -0.62
KRT4-201ENST00000548097 TSPEAR-AS2P59090 65 aa11.16□□□□□ -0.62
KRT4-201ENST00000548097 C6orf226Q5I0X4 101 aa11.16□□□□□ -0.62
KRT4-201ENST00000548097 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
KRT4-201ENST00000548097 MIEN1Q9BRT3 115 aa11.16□□□□□ -0.62
KRT4-201ENST00000548097 C14orf177Q52M58 125 aa11.16□□□□□ -0.62
KRT4-201ENST00000548097 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
KRT4-201ENST00000548097 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
KRT4-201ENST00000548097 IGKV2D-26A0A0A0MRZ7 120 aa11.15□□□□□ -0.62
KRT4-201ENST00000548097 UNQ6190/PRO20217Q6UXQ8 127 aa11.15□□□□□ -0.62
KRT4-201ENST00000548097 Q6ZRU5 148 aa11.15□□□□□ -0.62
KRT4-201ENST00000548097 Q8IZM0 81 aa11.15□□□□□ -0.62
KRT4-201ENST00000548097 CAMK2N2Q96S95 79 aa11.15□□□□□ -0.62
KRT4-201ENST00000548097 HERVK_113P61574 105 aa11.14□□□□□ -0.63
KRT4-201ENST00000548097 A0A1B0GVY2 172 aa11.13□□□□□ -0.63
KRT4-201ENST00000548097 CKS1BP61024 79 aa11.13□□□□□ -0.63
KRT4-201ENST00000548097 TTTY13Q9BZ97 58 aa11.13□□□□□ -0.63
KRT4-201ENST00000548097 E9PLD3 99 aa11.12□□□□□ -0.63
KRT4-201ENST00000548097 LEPROTO15243 131 aa11.12□□□□□ -0.63
KRT4-201ENST00000548097 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
KRT4-201ENST00000548097 SYCNQ0VAF6 134 aa11.12□□□□□ -0.63
KRT4-201ENST00000548097 C9orf116Q5BN46 136 aaPredicted RBP11.12□□□□□ -0.63
KRT4-201ENST00000548097 DNAH5Q8TE73 4624 aa11.11□□□□□ -0.63
KRT4-201ENST00000548097 IGLV5-52A0A0A0MRZ9 124 aa11.11□□□□□ -0.63
KRT4-201ENST00000548097 J3QQQ9 107 aa11.11□□□□□ -0.63
KRT4-201ENST00000548097 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
KRT4-201ENST00000548097 NDUFA1O15239 70 aa11.1□□□□□ -0.63
KRT4-201ENST00000548097 NMUP48645 174 aa11.1□□□□□ -0.63
KRT4-201ENST00000548097 CARD19Q96LW7 228 aa11.1□□□□□ -0.63
KRT4-201ENST00000548097 C6orf48Q9UBA6 75 aa11.1□□□□□ -0.63
KRT4-201ENST00000548097 PKHD1P08F94 4074 aa11.1□□□□□ -0.63
KRT4-201ENST00000548097 CNBPP62633 177 aaKnown RBP11.09□□□□□ -0.63
KRT4-201ENST00000548097 LGALS3P17931 250 aaKnown RBP11.08□□□□□ -0.64
KRT4-201ENST00000548097 PLEKHB2Q96CS7 222 aa11.08□□□□□ -0.64
KRT4-201ENST00000548097 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
KRT4-201ENST00000548097 NDUFA12Q9UI09 145 aa11.07□□□□□ -0.64
KRT4-201ENST00000548097 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
KRT4-201ENST00000548097 HSBP1L1C9JCN9 74 aa11.07□□□□□ -0.64
KRT4-201ENST00000548097 PCP2Q8IVA1 136 aa11.07□□□□□ -0.64
KRT4-201ENST00000548097 UQCR10Q9UDW1 63 aa11.07□□□□□ -0.64
KRT4-201ENST00000548097 TP73-AS1Q9UF72 201 aa11.07□□□□□ -0.64
KRT4-201ENST00000548097 C9orf163Q8N9P6 203 aa11.06□□□□□ -0.64
KRT4-201ENST00000548097 A0A0U1RRA0 63 aa11.05□□□□□ -0.64
KRT4-201ENST00000548097 DLEU1O43261 78 aa11.05□□□□□ -0.64
KRT4-201ENST00000548097 CXCL5P42830 114 aa11.05□□□□□ -0.64
KRT4-201ENST00000548097 COL5A1-AS1Q5SY13 56 aa11.05□□□□□ -0.64
KRT4-201ENST00000548097 PGPEP1Q9NXJ5 209 aa11.05□□□□□ -0.64
KRT4-201ENST00000548097 SPATA45Q537H7 98 aa11.04□□□□□ -0.64
KRT4-201ENST00000548097 PFN2P35080 140 aa11.03□□□□□ -0.64
KRT4-201ENST00000548097 EPPK1P58107 5090 aaKnown RBP11.03□□□□□ -0.64
KRT4-201ENST00000548097 TRBV30A0A0K0K1B3 111 aa11.02□□□□□ -0.64
KRT4-201ENST00000548097 ZNF815PA8K554 130 aa11.02□□□□□ -0.64
KRT4-201ENST00000548097 MYMXA0A1B0GTQ4 84 aa11.02□□□□□ -0.65
KRT4-201ENST00000548097 F8WDY8 70 aa11.02□□□□□ -0.65
KRT4-201ENST00000548097 GCSHP23434 173 aa11.01□□□□□ -0.65
KRT4-201ENST00000548097 KRTAP10-1P60331 282 aa11.01□□□□□ -0.65
KRT4-201ENST00000548097 RPL18AQ02543 176 aaKnown RBP11.01□□□□□ -0.65
KRT4-201ENST00000548097 C16orf90A8MZG2 172 aa11□□□□□ -0.65
KRT4-201ENST00000548097 CHTF8P0CG12 524 aa11□□□□□ -0.65
KRT4-201ENST00000548097 SDIM1Q6ZPB5 146 aa11□□□□□ -0.65
KRT4-201ENST00000548097 Q6ZRP5 223 aa11□□□□□ -0.65
KRT4-201ENST00000548097 ERG28Q9UKR5 140 aa11□□□□□ -0.65
KRT4-201ENST00000548097 IGKV2-24A0A0C4DH68 120 aa11□□□□□ -0.65
KRT4-201ENST00000548097 SMIM13P0DJ93 91 aa11□□□□□ -0.65
KRT4-201ENST00000548097 GAGE2BQ13066 116 aa11□□□□□ -0.65
KRT4-201ENST00000548097 GAGE2EQ4V326 116 aa11□□□□□ -0.65
KRT4-201ENST00000548097 MEIG1Q5JSS6 88 aa11□□□□□ -0.65
KRT4-201ENST00000548097 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
KRT4-201ENST00000548097 A0A096LNI7 61 aa10.99□□□□□ -0.65
KRT4-201ENST00000548097 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
KRT4-201ENST00000548097 PANO1I0J062 215 aa10.99□□□□□ -0.65
KRT4-201ENST00000548097 HNRNPA3P51991 378 aaKnown RBP10.99□□□□□ -0.65
KRT4-201ENST00000548097 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
KRT4-201ENST00000548097 DAND5Q8N907 189 aa10.98□□□□□ -0.65
KRT4-201ENST00000548097 HERV-K104P63124 156 aa10.98□□□□□ -0.65
KRT4-201ENST00000548097 LOC107984640A0A0U1RRK4 108 aa10.97□□□□□ -0.65
KRT4-201ENST00000548097 LINC00158P58513 81 aa10.97□□□□□ -0.65
KRT4-201ENST00000548097 FAM30AQ9NZY2 134 aa10.97□□□□□ -0.65
KRT4-201ENST00000548097 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
KRT4-201ENST00000548097 NDUFC2-KCTD14E9PQ53 114 aa10.96□□□□□ -0.65
KRT4-201ENST00000548097 HAMPP81172 84 aa10.96□□□□□ -0.65
KRT4-201ENST00000548097 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
KRT4-201ENST00000548097 XAGE1AQ9HD64 81 aa10.96□□□□□ -0.65
KRT4-201ENST00000548097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.96□□□□□ -0.65
KRT4-201ENST00000548097 LRP1BQ9NZR2 4599 aa10.96□□□□□ -0.65
KRT4-201ENST00000548097 COX8AP10176 69 aa10.95□□□□□ -0.66
KRT4-201ENST00000548097 BATFQ16520 125 aa10.95□□□□□ -0.66
KRT4-201ENST00000548097 ADAMTSL4-AS1Q5T5F5 129 aa10.95□□□□□ -0.66
KRT4-201ENST00000548097 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
KRT4-201ENST00000548097 TLX1NBP0CAT3 122 aa10.94□□□□□ -0.66
KRT4-201ENST00000548097 PTTG1IPP53801 180 aa10.93□□□□□ -0.66
KRT4-201ENST00000548097 NPC2P61916 151 aa10.93□□□□□ -0.66
KRT4-201ENST00000548097 BOD1L2Q8IYS8 172 aa10.93□□□□□ -0.66
KRT4-201ENST00000548097 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
KRT4-201ENST00000548097 C9orf129Q5T035 196 aaKnown RBP10.93□□□□□ -0.66
KRT4-201ENST00000548097 LITAFQ99732 161 aa10.92□□□□□ -0.66
KRT4-201ENST00000548097 FAM168BA1KXE4 195 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms