RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 TRGC2P03986 189 aa15.13■□□□□ 0.01
RBFOX1-209ENST00000547427 PDZD11Q5EBL8 140 aa15.13■□□□□ 0.01
RBFOX1-209ENST00000547427 CHCHD1Q96BP2 118 aaKnown RBP15.13■□□□□ 0.01
RBFOX1-209ENST00000547427 BAGE3Q86Y29 109 aa15.12■□□□□ 0.01
RBFOX1-209ENST00000547427 IGLV5-45A0A087WSX0 123 aa15.11■□□□□ 0.01
RBFOX1-209ENST00000547427 TLX1NBP0CAT3 122 aa15.11■□□□□ 0.01
RBFOX1-209ENST00000547427 GAGE2EQ4V326 116 aa15.11■□□□□ 0.01
RBFOX1-209ENST00000547427 GAGE2DQ9UEU5 116 aa15.11■□□□□ 0.01
RBFOX1-209ENST00000547427 SMIM1B2RUZ4 78 aa15.1■□□□□ 0.01
RBFOX1-209ENST00000547427 H3BRM9 83 aa15.1■□□□□ 0.01
RBFOX1-209ENST00000547427 C9orf116Q5BN46 136 aaPredicted RBP15.1■□□□□ 0.01
RBFOX1-209ENST00000547427 Q6ZRP5 223 aa15.1■□□□□ 0.01
RBFOX1-209ENST00000547427 A0A1W2PNN7 141 aa15.09■□□□□ 0.01
RBFOX1-209ENST00000547427 SPINK8P0C7L1 97 aa15.09■□□□□ 0.01
RBFOX1-209ENST00000547427 NDUFC2-KCTD14E9PQ53 114 aa15.07■□□□□ 0
RBFOX1-209ENST00000547427 HSBP1O75506 76 aa15.07■□□□□ 0
RBFOX1-209ENST00000547427 IGLC3P0DOY3 106 aa15.07■□□□□ 0
RBFOX1-209ENST00000547427 CXCL5P42830 114 aa15.07■□□□□ 0
RBFOX1-209ENST00000547427 COX7B2Q8TF08 81 aa15.07■□□□□ 0
RBFOX1-209ENST00000547427 F8VRH5 84 aa15.06■□□□□ 0
RBFOX1-209ENST00000547427 COLCA2A8K830 154 aa15.05■□□□□ -0
RBFOX1-209ENST00000547427 J3QL48 77 aa15.04■□□□□ -0
RBFOX1-209ENST00000547427 HNRNPA3P51991 378 aaKnown RBP15.04■□□□□ -0
RBFOX1-209ENST00000547427 PRR3P79522 188 aaKnown RBP15.02■□□□□ -0
RBFOX1-209ENST00000547427 FAM19A2Q8N3H0 131 aa15.02■□□□□ -0
RBFOX1-209ENST00000547427 IFI27L1Q96BM0 104 aa15.02■□□□□ -0
RBFOX1-209ENST00000547427 ZNF22P17026 224 aaPredicted RBP15.01□□□□□ -0.01
RBFOX1-209ENST00000547427 FAM19A5Q7Z5A7 132 aaPredicted RBP15.01□□□□□ -0.01
RBFOX1-209ENST00000547427 CHTOPQ9Y3Y2 248 aaKnown RBP15.01□□□□□ -0.01
RBFOX1-209ENST00000547427 FAM168BA1KXE4 195 aa15□□□□□ -0.01
RBFOX1-209ENST00000547427 DMBT1Q9UGM3 2413 aaPredicted RBP15□□□□□ -0.01
RBFOX1-209ENST00000547427 KRTAP29-1A8MX34 341 aaPredicted RBP14.99□□□□□ -0.01
RBFOX1-209ENST00000547427 SCO1O75880 301 aa14.99□□□□□ -0.01
RBFOX1-209ENST00000547427 TMEM170BQ5T4T1 132 aa14.99□□□□□ -0.01
RBFOX1-209ENST00000547427 PHF5AQ7RTV0 110 aaKnown RBP14.99□□□□□ -0.01
RBFOX1-209ENST00000547427 MYCBP2O75592 4640 aa14.99□□□□□ -0.01
RBFOX1-209ENST00000547427 C11orf86A6NJI1 115 aa14.98□□□□□ -0.01
RBFOX1-209ENST00000547427 SERF1AO75920 110 aa14.98□□□□□ -0.01
RBFOX1-209ENST00000547427 TRAV12-1A0A0B4J245 112 aa14.96□□□□□ -0.01
RBFOX1-209ENST00000547427 C9orf129Q5T035 196 aaKnown RBP14.96□□□□□ -0.01
RBFOX1-209ENST00000547427 IGLV5-39A0A0G2JS06 123 aa14.95□□□□□ -0.02
RBFOX1-209ENST00000547427 OXTP01178 125 aa14.95□□□□□ -0.02
RBFOX1-209ENST00000547427 LEPROTL1O95214 131 aa14.94□□□□□ -0.02
RBFOX1-209ENST00000547427 XAGE1AQ9HD64 81 aa14.94□□□□□ -0.02
RBFOX1-209ENST00000547427 H0Y8G0 127 aa14.93□□□□□ -0.02
RBFOX1-209ENST00000547427 M0QXV9 152 aa14.93□□□□□ -0.02
RBFOX1-209ENST00000547427 LINC00310P59036 64 aa14.92□□□□□ -0.02
RBFOX1-209ENST00000547427 PSORS1C2Q9UIG4 136 aa14.91□□□□□ -0.02
RBFOX1-209ENST00000547427 PKHD1L1Q86WI1 4243 aa14.9□□□□□ -0.02
RBFOX1-209ENST00000547427 NUPR1O60356 82 aa14.89□□□□□ -0.03
RBFOX1-209ENST00000547427 UBE2BP63146 152 aa14.89□□□□□ -0.03
RBFOX1-209ENST00000547427 KRTAP7-1Q8IUC3 87 aa14.89□□□□□ -0.03
RBFOX1-209ENST00000547427 HSPB8Q9UJY1 196 aa14.89□□□□□ -0.03
RBFOX1-209ENST00000547427 FABP4P15090 132 aa14.88□□□□□ -0.03
RBFOX1-209ENST00000547427 C1orf137Q5JT78 98 aa14.88□□□□□ -0.03
RBFOX1-209ENST00000547427 PFN2P35080 140 aa14.86□□□□□ -0.03
RBFOX1-209ENST00000547427 SERTAD4-AS1Q5TG53 156 aa14.86□□□□□ -0.03
RBFOX1-209ENST00000547427 SPINK6Q6UWN8 80 aa14.86□□□□□ -0.03
RBFOX1-209ENST00000547427 TMEM223A0PJW6 202 aa14.85□□□□□ -0.03
RBFOX1-209ENST00000547427 SFTA2Q6UW10 78 aa14.85□□□□□ -0.03
RBFOX1-209ENST00000547427 ODF1Q14990 250 aa14.84□□□□□ -0.03
RBFOX1-209ENST00000547427 ZNF625Q96I27 306 aaPredicted RBP14.84□□□□□ -0.03
RBFOX1-209ENST00000547427 HIST1H2BKO60814 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST1H2BJP06899 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST1H2BOP23527 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST1H2BBP33778 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST1H2BDP58876 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST1H2BCP62807 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST2H2BEQ16778 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST1H2BHQ93079 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST1H2BNQ99877 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 HIST1H2BMQ99879 126 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 C22orf24Q9Y442 160 aa14.83□□□□□ -0.04
RBFOX1-209ENST00000547427 ERG28Q9UKR5 140 aa14.82□□□□□ -0.04
RBFOX1-209ENST00000547427 LBHQ53QV2 105 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-209ENST00000547427 KRTAP11-1Q8IUC1 163 aa14.81□□□□□ -0.04
RBFOX1-209ENST00000547427 SRSF9Q13242 221 aaKnown RBP eCLIP14.8□□□□□ -0.04
RBFOX1-209ENST00000547427 LRP1Q07954 4544 aaKnown RBP14.8□□□□□ -0.04
RBFOX1-209ENST00000547427 COX17Q14061 63 aa14.79□□□□□ -0.04
RBFOX1-209ENST00000547427 REG3GQ6UW15 175 aa14.79□□□□□ -0.04
RBFOX1-209ENST00000547427 PLNP26678 52 aa14.78□□□□□ -0.04
RBFOX1-209ENST00000547427 MAP1LC3CQ9BXW4 147 aa14.78□□□□□ -0.04
RBFOX1-209ENST00000547427 IGLV7-43P04211 117 aa14.77□□□□□ -0.05
RBFOX1-209ENST00000547427 MRPL55Q7Z7F7 128 aaKnown RBP14.77□□□□□ -0.05
RBFOX1-209ENST00000547427 TP73-AS1Q9UF72 201 aa14.77□□□□□ -0.05
RBFOX1-209ENST00000547427 PLA2G2DQ9UNK4 145 aa14.76□□□□□ -0.05
RBFOX1-209ENST00000547427 DPM2O94777 84 aa14.75□□□□□ -0.05
RBFOX1-209ENST00000547427 NKAPP1Q8N9T2 125 aa14.75□□□□□ -0.05
RBFOX1-209ENST00000547427 PMCHL2Q9BQD1 86 aa14.75□□□□□ -0.05
RBFOX1-209ENST00000547427 FAT3Q8TDW7 4589 aa14.75□□□□□ -0.05
RBFOX1-209ENST00000547427 LINC00158P58513 81 aa14.74□□□□□ -0.05
RBFOX1-209ENST00000547427 SND1-IT1Q9HBX3 110 aa14.74□□□□□ -0.05
RBFOX1-209ENST00000547427 HERC1Q15751 4861 aa14.73□□□□□ -0.05
RBFOX1-209ENST00000547427 IGKCP01834 107 aa14.72□□□□□ -0.05
RBFOX1-209ENST00000547427 A0A0U1RRA0 63 aa14.71□□□□□ -0.05
RBFOX1-209ENST00000547427 ATP6V1G1O75348 118 aa14.71□□□□□ -0.05
RBFOX1-209ENST00000547427 HERVK_113P61574 105 aa14.71□□□□□ -0.05
RBFOX1-209ENST00000547427 LINC01600Q96MT4 127 aa14.71□□□□□ -0.05
RBFOX1-209ENST00000547427 IGLV5-37A0A075B6J1 123 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms