RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 APOBP04114 4563 aaKnown RBP13.34□□□□□ -0.27
GPN3-205ENST00000547323 IGLV5-39A0A0G2JS06 123 aa13.34□□□□□ -0.27
GPN3-205ENST00000547323 CHTF8P0CG12 524 aa13.34□□□□□ -0.27
GPN3-205ENST00000547323 HIST3H2BBQ8N257 126 aa13.34□□□□□ -0.27
GPN3-205ENST00000547323 C6orf48Q9UBA6 75 aa13.34□□□□□ -0.27
GPN3-205ENST00000547323 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
GPN3-205ENST00000547323 CKS1BP61024 79 aa13.33□□□□□ -0.28
GPN3-205ENST00000547323 TMEM223A0PJW6 202 aa13.32□□□□□ -0.28
GPN3-205ENST00000547323 S100A6P06703 90 aa13.32□□□□□ -0.28
GPN3-205ENST00000547323 KIAA1109Q2LD37 5005 aa13.32□□□□□ -0.28
GPN3-205ENST00000547323 A0A096LNI7 61 aa13.31□□□□□ -0.28
GPN3-205ENST00000547323 DPM2O94777 84 aa13.31□□□□□ -0.28
GPN3-205ENST00000547323 RNF151Q2KHN1 245 aa13.31□□□□□ -0.28
GPN3-205ENST00000547323 C9orf116Q5BN46 136 aaPredicted RBP13.31□□□□□ -0.28
GPN3-205ENST00000547323 IGKV2-24A0A0C4DH68 120 aa13.3□□□□□ -0.28
GPN3-205ENST00000547323 KRTDAPP60985 99 aa13.3□□□□□ -0.28
GPN3-205ENST00000547323 SNRPEP62304 92 aaKnown RBP13.3□□□□□ -0.28
GPN3-205ENST00000547323 KRTAP17-1Q9BYP8 105 aa13.3□□□□□ -0.28
GPN3-205ENST00000547323 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
GPN3-205ENST00000547323 PLNP26678 52 aa13.29□□□□□ -0.28
GPN3-205ENST00000547323 PET117Q6UWS5 81 aa13.29□□□□□ -0.28
GPN3-205ENST00000547323 TRBV30A0A0K0K1B3 111 aa13.28□□□□□ -0.28
GPN3-205ENST00000547323 IGKCP01834 107 aa13.28□□□□□ -0.28
GPN3-205ENST00000547323 GAGE2BQ13066 116 aa13.28□□□□□ -0.28
GPN3-205ENST00000547323 LINC01545Q5VT33 79 aa13.28□□□□□ -0.28
GPN3-205ENST00000547323 SCXQ7RTU7 201 aa13.28□□□□□ -0.28
GPN3-205ENST00000547323 HIST1H2BLQ99880 126 aa13.28□□□□□ -0.28
GPN3-205ENST00000547323 S100A2P29034 98 aa13.27□□□□□ -0.29
GPN3-205ENST00000547323 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.29
GPN3-205ENST00000547323 CIRBP-AS1Q8TBR5 109 aa13.27□□□□□ -0.29
GPN3-205ENST00000547323 DPH3Q96FX2 82 aa13.27□□□□□ -0.29
GPN3-205ENST00000547323 HSPG2P98160 4391 aa13.26□□□□□ -0.29
GPN3-205ENST00000547323 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
GPN3-205ENST00000547323 SPACA4Q8TDM5 124 aa13.26□□□□□ -0.29
GPN3-205ENST00000547323 C5orf52A6NGY3 159 aa13.25□□□□□ -0.29
GPN3-205ENST00000547323 CXCL5P42830 114 aa13.25□□□□□ -0.29
GPN3-205ENST00000547323 MAJINQ3KP22 176 aa13.25□□□□□ -0.29
GPN3-205ENST00000547323 SMR3BP02814 79 aaPredicted RBP13.24□□□□□ -0.29
GPN3-205ENST00000547323 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
GPN3-205ENST00000547323 Q6ZRP5 223 aa13.24□□□□□ -0.29
GPN3-205ENST00000547323 TLX1NBP0CAT3 122 aa13.23□□□□□ -0.29
GPN3-205ENST00000547323 RYR1P21817 5038 aa13.23□□□□□ -0.29
GPN3-205ENST00000547323 HERC2O95714 4834 aa13.23□□□□□ -0.29
GPN3-205ENST00000547323 A0A087WYN8 130 aa13.22□□□□□ -0.29
GPN3-205ENST00000547323 PKIGQ9Y2B9 76 aa13.22□□□□□ -0.29
GPN3-205ENST00000547323 GAGE2EQ4V326 116 aa13.21□□□□□ -0.29
GPN3-205ENST00000547323 GAGE2DQ9UEU5 116 aa13.21□□□□□ -0.29
GPN3-205ENST00000547323 NDUFC2-KCTD14E9PQ53 114 aa13.2□□□□□ -0.3
GPN3-205ENST00000547323 TSPEAR-AS2P59090 65 aa13.2□□□□□ -0.3
GPN3-205ENST00000547323 STPG4Q8N801 248 aa13.2□□□□□ -0.3
GPN3-205ENST00000547323 ZNF625Q96I27 306 aaPredicted RBP13.2□□□□□ -0.3
GPN3-205ENST00000547323 LEPROTO15243 131 aa13.19□□□□□ -0.3
GPN3-205ENST00000547323 LINC00474Q9P2X8 69 aa13.19□□□□□ -0.3
GPN3-205ENST00000547323 PLAC8Q9NZF1 115 aa13.18□□□□□ -0.3
GPN3-205ENST00000547323 A0A1W2PNN7 141 aa13.17□□□□□ -0.3
GPN3-205ENST00000547323 HERVK_113P61574 105 aa13.17□□□□□ -0.3
GPN3-205ENST00000547323 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
GPN3-205ENST00000547323 ATOH7Q8N100 152 aa13.16□□□□□ -0.3
GPN3-205ENST00000547323 PLEKHB2Q96CS7 222 aa13.16□□□□□ -0.3
GPN3-205ENST00000547323 C20orf202A1L168 122 aa13.15□□□□□ -0.3
GPN3-205ENST00000547323 PFN2P35080 140 aa13.15□□□□□ -0.3
GPN3-205ENST00000547323 C9orf129Q5T035 196 aaKnown RBP13.15□□□□□ -0.3
GPN3-205ENST00000547323 NDUFA12Q9UI09 145 aa13.15□□□□□ -0.3
GPN3-205ENST00000547323 FAM168BA1KXE4 195 aa13.14□□□□□ -0.31
GPN3-205ENST00000547323 J3QQQ9 107 aa13.14□□□□□ -0.31
GPN3-205ENST00000547323 Q8N1X5 172 aa13.14□□□□□ -0.31
GPN3-205ENST00000547323 XAGE1AQ9HD64 81 aa13.14□□□□□ -0.31
GPN3-205ENST00000547323 E9PLD3 99 aa13.13□□□□□ -0.31
GPN3-205ENST00000547323 ERG28Q9UKR5 140 aa13.13□□□□□ -0.31
GPN3-205ENST00000547323 SFTA2Q6UW10 78 aa13.12□□□□□ -0.31
GPN3-205ENST00000547323 KRTAP4-5Q9BYR2 181 aa13.12□□□□□ -0.31
GPN3-205ENST00000547323 KRTAP7-1Q8IUC3 87 aa13.11□□□□□ -0.31
GPN3-205ENST00000547323 LINC00528Q8N1L1 170 aa13.11□□□□□ -0.31
GPN3-205ENST00000547323 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
GPN3-205ENST00000547323 MYMXA0A1B0GTQ4 84 aa13.1□□□□□ -0.31
GPN3-205ENST00000547323 EPM2AB3EWF7 344 aa13.1□□□□□ -0.31
GPN3-205ENST00000547323 LGALS3P17931 250 aaKnown RBP13.1□□□□□ -0.31
GPN3-205ENST00000547323 A0A0U1RRA0 63 aa13.09□□□□□ -0.31
GPN3-205ENST00000547323 FAT1Q14517 4588 aa13.09□□□□□ -0.31
GPN3-205ENST00000547323 ANKRD39Q53RE8 183 aa13.08□□□□□ -0.32
GPN3-205ENST00000547323 FAM19A5Q7Z5A7 132 aaPredicted RBP13.08□□□□□ -0.32
GPN3-205ENST00000547323 SMIM13P0DJ93 91 aa13.07□□□□□ -0.32
GPN3-205ENST00000547323 LINC00158P58513 81 aa13.07□□□□□ -0.32
GPN3-205ENST00000547323 HERV-K104P63124 156 aa13.07□□□□□ -0.32
GPN3-205ENST00000547323 COX17Q14061 63 aa13.07□□□□□ -0.32
GPN3-205ENST00000547323 Q5VSD8 79 aa13.07□□□□□ -0.32
GPN3-205ENST00000547323 SERTAD4-AS1Q5TG53 156 aa13.06□□□□□ -0.32
GPN3-205ENST00000547323 SND1-IT1Q9HBX3 110 aa13.06□□□□□ -0.32
GPN3-205ENST00000547323 FAM229AH3BQW9 127 aa13.05□□□□□ -0.32
GPN3-205ENST00000547323 SCGB1D1O95968 90 aa13.05□□□□□ -0.32
GPN3-205ENST00000547323 NMUP48645 174 aa13.05□□□□□ -0.32
GPN3-205ENST00000547323 MEIG1Q5JSS6 88 aa13.05□□□□□ -0.32
GPN3-205ENST00000547323 TTTY13Q9BZ97 58 aa13.05□□□□□ -0.32
GPN3-205ENST00000547323 PHF5AQ7RTV0 110 aaKnown RBP13.04□□□□□ -0.32
GPN3-205ENST00000547323 AKR1D1P51857 326 aa13.03□□□□□ -0.32
GPN3-205ENST00000547323 A0A0J9YXY3 114 aa13.01□□□□□ -0.33
GPN3-205ENST00000547323 MIR7-3HGQ8N6C7 128 aa13□□□□□ -0.33
GPN3-205ENST00000547323 ZNF815PA8K554 130 aa12.99□□□□□ -0.33
GPN3-205ENST00000547323 M0QXV9 152 aa12.99□□□□□ -0.33
GPN3-205ENST00000547323 KRTAP10-4P60372 401 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms