RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 LINC00336Q6ZUF6 198 aa10.39□□□□□ -0.75
TRAFD1-203ENST00000547063 ZNF625Q96I27 306 aaPredicted RBP10.39□□□□□ -0.75
TRAFD1-203ENST00000547063 DLEU1O43261 78 aa10.38□□□□□ -0.75
TRAFD1-203ENST00000547063 SYCNQ0VAF6 134 aa10.38□□□□□ -0.75
TRAFD1-203ENST00000547063 WFDC2Q14508 124 aa10.38□□□□□ -0.75
TRAFD1-203ENST00000547063 TRBV30A0A0K0K1B3 111 aa10.37□□□□□ -0.75
TRAFD1-203ENST00000547063 SLC25A34Q6PIV7 304 aa10.37□□□□□ -0.75
TRAFD1-203ENST00000547063 C2orf82Q6UX34 121 aa10.37□□□□□ -0.75
TRAFD1-203ENST00000547063 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
TRAFD1-203ENST00000547063 BOD1L2Q8IYS8 172 aa10.37□□□□□ -0.75
TRAFD1-203ENST00000547063 Q8N814 137 aa10.37□□□□□ -0.75
TRAFD1-203ENST00000547063 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
TRAFD1-203ENST00000547063 CNBPP62633 177 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-203ENST00000547063 RNF151Q2KHN1 245 aa10.36□□□□□ -0.75
TRAFD1-203ENST00000547063 SCGB1D4Q6XE38 83 aa10.36□□□□□ -0.75
TRAFD1-203ENST00000547063 C14orf144Q96I85 54 aa10.36□□□□□ -0.75
TRAFD1-203ENST00000547063 CARD19Q96LW7 228 aa10.36□□□□□ -0.75
TRAFD1-203ENST00000547063 TNP2Q05952 138 aa10.35□□□□□ -0.75
TRAFD1-203ENST00000547063 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-203ENST00000547063 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
TRAFD1-203ENST00000547063 TTTY13Q9BZ97 58 aa10.35□□□□□ -0.75
TRAFD1-203ENST00000547063 PKIGQ9Y2B9 76 aa10.35□□□□□ -0.75
TRAFD1-203ENST00000547063 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
TRAFD1-203ENST00000547063 COX17Q14061 63 aa10.34□□□□□ -0.75
TRAFD1-203ENST00000547063 Q6ZRU5 148 aa10.34□□□□□ -0.75
TRAFD1-203ENST00000547063 UQCR10Q9UDW1 63 aa10.34□□□□□ -0.75
TRAFD1-203ENST00000547063 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.33□□□□□ -0.76
TRAFD1-203ENST00000547063 TSTD3H0UI37 97 aa10.33□□□□□ -0.76
TRAFD1-203ENST00000547063 MEIG1Q5JSS6 88 aa10.33□□□□□ -0.76
TRAFD1-203ENST00000547063 A0A0J9YXY3 114 aa10.32□□□□□ -0.76
TRAFD1-203ENST00000547063 TIMM17BO60830 172 aa10.32□□□□□ -0.76
TRAFD1-203ENST00000547063 C10orf25Q5T742 122 aa10.32□□□□□ -0.76
TRAFD1-203ENST00000547063 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
TRAFD1-203ENST00000547063 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
TRAFD1-203ENST00000547063 TMEM238C9JI98 176 aa10.3□□□□□ -0.76
TRAFD1-203ENST00000547063 SLPIP03973 132 aa10.3□□□□□ -0.76
TRAFD1-203ENST00000547063 GCSHP23434 173 aa10.29□□□□□ -0.76
TRAFD1-203ENST00000547063 LINC00158P58513 81 aa10.29□□□□□ -0.76
TRAFD1-203ENST00000547063 MIEN1Q9BRT3 115 aa10.29□□□□□ -0.76
TRAFD1-203ENST00000547063 PRO1933Q9H354 126 aa10.29□□□□□ -0.76
TRAFD1-203ENST00000547063 HIGD1BQ9P298 99 aa10.29□□□□□ -0.76
TRAFD1-203ENST00000547063 PFN2P35080 140 aa10.28□□□□□ -0.76
TRAFD1-203ENST00000547063 C9orf163Q8N9P6 203 aa10.28□□□□□ -0.76
TRAFD1-203ENST00000547063 PGPEP1Q9NXJ5 209 aa10.28□□□□□ -0.76
TRAFD1-203ENST00000547063 LOC107984640A0A0U1RRK4 108 aa10.27□□□□□ -0.77
TRAFD1-203ENST00000547063 NDUFC2-KCTD14E9PQ53 114 aa10.27□□□□□ -0.77
TRAFD1-203ENST00000547063 TLX1NBP0CAT3 122 aa10.27□□□□□ -0.77
TRAFD1-203ENST00000547063 SMIM13P0DJ93 91 aa10.27□□□□□ -0.77
TRAFD1-203ENST00000547063 C9orf116Q5BN46 136 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-203ENST00000547063 Q6ZVH6 145 aa10.27□□□□□ -0.77
TRAFD1-203ENST00000547063 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
TRAFD1-203ENST00000547063 DNAH6Q9C0G6 4158 aa10.27□□□□□ -0.77
TRAFD1-203ENST00000547063 KMT2AQ03164 3969 aa10.26□□□□□ -0.77
TRAFD1-203ENST00000547063 IGLV5-52A0A0A0MRZ9 124 aa10.26□□□□□ -0.77
TRAFD1-203ENST00000547063 HNRNPA3P51991 378 aaKnown RBP10.25□□□□□ -0.77
TRAFD1-203ENST00000547063 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRAFD1-203ENST00000547063 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-203ENST00000547063 A0A0U1RRA0 63 aa10.24□□□□□ -0.77
TRAFD1-203ENST00000547063 LITAFQ99732 161 aa10.24□□□□□ -0.77
TRAFD1-203ENST00000547063 SPANXDQ9BXN6 97 aa10.24□□□□□ -0.77
TRAFD1-203ENST00000547063 SPANXCQ9NY87 97 aa10.24□□□□□ -0.77
TRAFD1-203ENST00000547063 IFITM1P13164 125 aa10.23□□□□□ -0.77
TRAFD1-203ENST00000547063 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-203ENST00000547063 C2orf91Q6ZV80 131 aa10.23□□□□□ -0.77
TRAFD1-203ENST00000547063 MIR7-3HGQ8N6C7 128 aa10.23□□□□□ -0.77
TRAFD1-203ENST00000547063 TP73-AS1Q9UF72 201 aa10.23□□□□□ -0.77
TRAFD1-203ENST00000547063 TAL2Q16559 108 aa10.22□□□□□ -0.77
TRAFD1-203ENST00000547063 ADAMTSL4-AS1Q5T5F5 129 aa10.22□□□□□ -0.77
TRAFD1-203ENST00000547063 HIST1H4GQ99525 98 aa10.22□□□□□ -0.77
TRAFD1-203ENST00000547063 PTTG1IPP53801 180 aa10.21□□□□□ -0.77
TRAFD1-203ENST00000547063 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
TRAFD1-203ENST00000547063 LINC00474Q9P2X8 69 aa10.21□□□□□ -0.77
TRAFD1-203ENST00000547063 C16orf90A8MZG2 172 aa10.2□□□□□ -0.78
TRAFD1-203ENST00000547063 KRTAP10-2P60368 255 aa10.2□□□□□ -0.78
TRAFD1-203ENST00000547063 GAGE2EQ4V326 116 aa10.2□□□□□ -0.78
TRAFD1-203ENST00000547063 Q6ZRP5 223 aa10.2□□□□□ -0.78
TRAFD1-203ENST00000547063 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
TRAFD1-203ENST00000547063 GAGE2DQ9UEU5 116 aa10.2□□□□□ -0.78
TRAFD1-203ENST00000547063 GAGE2BQ13066 116 aa10.19□□□□□ -0.78
TRAFD1-203ENST00000547063 SDIM1Q6ZPB5 146 aa10.19□□□□□ -0.78
TRAFD1-203ENST00000547063 DAND5Q8N907 189 aa10.19□□□□□ -0.78
TRAFD1-203ENST00000547063 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
TRAFD1-203ENST00000547063 DDTP30046 118 aa10.18□□□□□ -0.78
TRAFD1-203ENST00000547063 HSD52Q0P140 79 aa10.18□□□□□ -0.78
TRAFD1-203ENST00000547063 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
TRAFD1-203ENST00000547063 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
TRAFD1-203ENST00000547063 RPL24P83731 157 aaKnown RBP10.17□□□□□ -0.78
TRAFD1-203ENST00000547063 A0A1B0GVY2 172 aa10.16□□□□□ -0.78
TRAFD1-203ENST00000547063 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
TRAFD1-203ENST00000547063 A0A096LNI7 61 aa10.15□□□□□ -0.78
TRAFD1-203ENST00000547063 LINC01620Q4KN68 170 aa10.15□□□□□ -0.78
TRAFD1-203ENST00000547063 MUSTN1Q8IVN3 82 aa10.15□□□□□ -0.78
TRAFD1-203ENST00000547063 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
TRAFD1-203ENST00000547063 IGKV2-24A0A0C4DH68 120 aa10.14□□□□□ -0.79
TRAFD1-203ENST00000547063 NPC2P61916 151 aa10.14□□□□□ -0.79
TRAFD1-203ENST00000547063 CEND1Q8N111 149 aa10.14□□□□□ -0.79
TRAFD1-203ENST00000547063 HYDINQ4G0P3 5121 aa10.14□□□□□ -0.79
TRAFD1-203ENST00000547063 TMEM238LA0A1B0GVL6 79 aa10.13□□□□□ -0.79
TRAFD1-203ENST00000547063 A6NJY4 79 aa10.13□□□□□ -0.79
TRAFD1-203ENST00000547063 M0R143 59 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms