RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 LINC01561Q8N1V8 128 aa6.25□□□□□ -1.41
R3HDM2-210ENST00000547019 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
R3HDM2-210ENST00000547019 C2orf48Q96LS8 159 aa6.25□□□□□ -1.41
R3HDM2-210ENST00000547019 CST9LQ9H4G1 147 aa6.25□□□□□ -1.41
R3HDM2-210ENST00000547019 TINCRA0A1B0GVN0 87 aa6.24□□□□□ -1.41
R3HDM2-210ENST00000547019 NDUFA1O15239 70 aa6.24□□□□□ -1.41
R3HDM2-210ENST00000547019 PRSS2P07478 247 aa6.24□□□□□ -1.41
R3HDM2-210ENST00000547019 LINC00310P59036 64 aa6.24□□□□□ -1.41
R3HDM2-210ENST00000547019 IFI27L1Q96BM0 104 aa6.24□□□□□ -1.41
R3HDM2-210ENST00000547019 TOMM7Q9P0U1 55 aa6.24□□□□□ -1.41
R3HDM2-210ENST00000547019 CDKN2A-AS1Q9UH64 79 aa6.24□□□□□ -1.41
R3HDM2-210ENST00000547019 IGLV5-45A0A087WSX0 123 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 IGKV2-24A0A0C4DH68 120 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BKO60814 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BJP06899 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 CHTF8P0CG12 524 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 IGLC3P0DOY3 106 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BOP23527 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BBP33778 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BDP58876 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BCP62807 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST2H2BEQ16778 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BHQ93079 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BNQ99877 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 HIST1H2BMQ99879 126 aa6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
R3HDM2-210ENST00000547019 A0A096LNI7 61 aa6.22□□□□□ -1.41
R3HDM2-210ENST00000547019 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
R3HDM2-210ENST00000547019 F8WDY8 70 aa6.22□□□□□ -1.41
R3HDM2-210ENST00000547019 LEPROTL1O95214 131 aa6.22□□□□□ -1.41
R3HDM2-210ENST00000547019 LOC107984640A0A0U1RRK4 108 aa6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 H0Y8G0 127 aa6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 H3BRM9 83 aa6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 ZNF22P17026 224 aaPredicted RBP6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 RPL18AQ02543 176 aaKnown RBP6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 Q8IZM0 81 aa6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 SPACA4Q8TDM5 124 aa6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 MRPL35Q9NZE8 188 aaKnown RBP6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 CHTOPQ9Y3Y2 248 aaKnown RBP6.21□□□□□ -1.42
R3HDM2-210ENST00000547019 TRAV12-1A0A0B4J245 112 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 NUPR1O60356 82 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 CXCL5P42830 114 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 CKS1BP61024 79 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 CIRBPQ14011 172 aaKnown RBP6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 KIAA0087Q14695 138 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 MAJINQ3KP22 176 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 C2orf82Q6UX34 121 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 UNQ6190/PRO20217Q6UXQ8 127 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 LINC01600Q96MT4 127 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 C6orf48Q9UBA6 75 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 HSPB8Q9UJY1 196 aa6.2□□□□□ -1.42
R3HDM2-210ENST00000547019 TRBV30A0A0K0K1B3 111 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 F8VRH5 84 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 FABP4P15090 132 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 C6orf226Q5I0X4 101 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 TMEM170BQ5T4T1 132 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 C10orf25Q5T742 122 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 COX7B2Q8TF08 81 aa6.19□□□□□ -1.42
R3HDM2-210ENST00000547019 A0A087WYN8 130 aa6.18□□□□□ -1.42
R3HDM2-210ENST00000547019 PTTG1IPP53801 180 aa6.18□□□□□ -1.42
R3HDM2-210ENST00000547019 DPH3Q96FX2 82 aa6.18□□□□□ -1.42
R3HDM2-210ENST00000547019 LINC00474Q9P2X8 69 aa6.18□□□□□ -1.42
R3HDM2-210ENST00000547019 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
R3HDM2-210ENST00000547019 STPG4Q8N801 248 aa6.17□□□□□ -1.42
R3HDM2-210ENST00000547019 TLX1NBP0CAT3 122 aa6.16□□□□□ -1.42
R3HDM2-210ENST00000547019 MAP1LC3CQ9BXW4 147 aa6.16□□□□□ -1.42
R3HDM2-210ENST00000547019 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
R3HDM2-210ENST00000547019 IGLV5-39A0A0G2JS06 123 aa6.15□□□□□ -1.42
R3HDM2-210ENST00000547019 GAGE2EQ4V326 116 aa6.15□□□□□ -1.42
R3HDM2-210ENST00000547019 C9orf116Q5BN46 136 aaPredicted RBP6.15□□□□□ -1.42
R3HDM2-210ENST00000547019 COA6Q5JTJ3 125 aaKnown RBP6.15□□□□□ -1.42
R3HDM2-210ENST00000547019 GAGE2DQ9UEU5 116 aa6.15□□□□□ -1.42
R3HDM2-210ENST00000547019 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
R3HDM2-210ENST00000547019 NDUFC2-KCTD14E9PQ53 114 aa6.14□□□□□ -1.43
R3HDM2-210ENST00000547019 PLNP26678 52 aa6.14□□□□□ -1.43
R3HDM2-210ENST00000547019 Q6ZRP5 223 aa6.14□□□□□ -1.43
R3HDM2-210ENST00000547019 PMCHL2Q9BQD1 86 aa6.14□□□□□ -1.43
R3HDM2-210ENST00000547019 TMEM223A0PJW6 202 aa6.13□□□□□ -1.43
R3HDM2-210ENST00000547019 DPM2O94777 84 aa6.13□□□□□ -1.43
R3HDM2-210ENST00000547019 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
R3HDM2-210ENST00000547019 SYS1-DBNDD2H3BUS1 97 aa6.12□□□□□ -1.43
R3HDM2-210ENST00000547019 IGKCP01834 107 aa6.12□□□□□ -1.43
R3HDM2-210ENST00000547019 HERVK_113P61574 105 aa6.12□□□□□ -1.43
R3HDM2-210ENST00000547019 SFTA2Q6UW10 78 aa6.12□□□□□ -1.43
R3HDM2-210ENST00000547019 FAM19A5Q7Z5A7 132 aaPredicted RBP6.12□□□□□ -1.43
R3HDM2-210ENST00000547019 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
R3HDM2-210ENST00000547019 KRTDAPP60985 99 aa6.1□□□□□ -1.43
R3HDM2-210ENST00000547019 ZNF625Q96I27 306 aaPredicted RBP6.1□□□□□ -1.43
R3HDM2-210ENST00000547019 XAGE1AQ9HD64 81 aa6.1□□□□□ -1.43
R3HDM2-210ENST00000547019 ERG28Q9UKR5 140 aa6.1□□□□□ -1.43
R3HDM2-210ENST00000547019 FAM168BA1KXE4 195 aa6.09□□□□□ -1.43
R3HDM2-210ENST00000547019 M0QXV9 152 aa6.09□□□□□ -1.43
R3HDM2-210ENST00000547019 S100A6P06703 90 aa6.09□□□□□ -1.43
R3HDM2-210ENST00000547019 C3orf79P0CE67 100 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms