RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 DSCR9P59020 149 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 C17orf58Q2M2W7 97 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 KPRPQ5T749 579 aaPredicted RBP3.47□□□□□ -1.85
UBE4A-203ENST00000545354 CSNK1G2-AS1Q8NCQ2 148 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 NPBQ8NG41 125 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 DSCAMO60469 2012 aa3.46□□□□□ -1.85
UBE4A-203ENST00000545354 MYO9AB2RTY4 2548 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 RELNP78509 3460 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 A0A087WYN8 130 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 IGKV2-29A2NJV5 120 aaPredicted RBP3.46□□□□□ -1.86
UBE4A-203ENST00000545354 NDUFA4O00483 81 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 TFF1P04155 84 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 GAFA1Q96PS6 74 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 APC2O95996 2303 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 PRRC2AP48634 2157 aaKnown RBP3.46□□□□□ -1.86
UBE4A-203ENST00000545354 ATMQ13315 3056 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 PLXNB1O43157 2135 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 Q8NDZ9 215 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 PLAC8Q9NZF1 115 aa3.46□□□□□ -1.86
UBE4A-203ENST00000545354 CACNA1EQ15878 2313 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 UBR5O95071 2799 aaPredicted RBP3.45□□□□□ -1.86
UBE4A-203ENST00000545354 ESPL1Q14674 2120 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 F5P12259 2224 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 ACACAQ13085 2346 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 TRGV2A0A075B6R0 118 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 IGKV3D-15A0A087WSY6 115 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 IGHV3-38A0A0C4DH36 116 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 H0Y9P7 68 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 PLA2G2AP14555 144 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 SMIM11BQ8TCY0 68 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 CEP192Q8TEP8 1941 aa3.45□□□□□ -1.86
UBE4A-203ENST00000545354 MGAQ8IWI9 3026 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 IGHV7-4-1A0A0J9YVY3 117 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 Q8NAQ8 132 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 ARFGEF3Q5TH69 2177 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 MED12Q93074 2177 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 SPTAN1Q13813 2472 aaKnown RBP3.44□□□□□ -1.86
UBE4A-203ENST00000545354 ABCA12Q86UK0 2595 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 IGHV3-53P01767 116 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 LYZP61626 148 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 C9orf129Q5T035 196 aaKnown RBP3.44□□□□□ -1.86
UBE4A-203ENST00000545354 CASC10Q5T4H9 136 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 TMEM167AQ8TBQ9 72 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 NOTCH2Q04721 2471 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 FREM1Q5H8C1 2179 aa3.44□□□□□ -1.86
UBE4A-203ENST00000545354 NOTCH4Q99466 2003 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 TNRC6BQ9UPQ9 1833 aaKnown RBP3.43□□□□□ -1.86
UBE4A-203ENST00000545354 IGLV10-54A0A075B6I4 117 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 IGHV3-64A0A075B6Q5 118 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 IGHV1-8P0DP01 117 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 REG3GQ6UW15 175 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 CHCHD7Q9BUK0 85 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 MUC22E2RYF6 1773 aaPredicted RBP3.43□□□□□ -1.86
UBE4A-203ENST00000545354 IGLV5-39A0A0G2JS06 123 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 IGKV3-11P04433 115 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 MGPP08493 103 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 ZFP36P26651 326 aaKnown RBP3.43□□□□□ -1.86
UBE4A-203ENST00000545354 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 COX14Q96I36 57 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 KCNQ1DNQ9H478 68 aa3.43□□□□□ -1.86
UBE4A-203ENST00000545354 IGLV1-50A0A075B6I6 118 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 IGHV1-3A0A0C4DH29 117 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 IGKV4-1P06312 121 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 CGB3P0DN86 165 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 CGB7P0DN87 165 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 PRR4Q16378 134 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 IGFL4Q6B9Z1 124 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 DEFB124Q8NES8 71 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 C8orf17Q9NRJ1 99 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 DOPEY1Q5JWR5 2465 aa3.42□□□□□ -1.86
UBE4A-203ENST00000545354 IGHV3-15A0A0B4J1V0 119 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 IGHV3-64DA0A0J9YX35 117 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 A0A1W2PNM2 257 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 EGFEM1PQ0D2K5 195 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-203ENST00000545354 ARHGAP32A7KAX9 2087 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 URB1O60287 2271 aaKnown RBP3.41□□□□□ -1.86
UBE4A-203ENST00000545354 J3QKU1 62 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 RPL39P62891 51 aaKnown RBP3.41□□□□□ -1.86
UBE4A-203ENST00000545354 Q6ZTI0 123 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 RPL39LQ96EH5 51 aaKnown RBP3.41□□□□□ -1.86
UBE4A-203ENST00000545354 ZNF580Q9UK33 172 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 PTPRQQ9UMZ3 2332 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 FLNCQ14315 2725 aa3.41□□□□□ -1.86
UBE4A-203ENST00000545354 MUC4Q99102 2169 aa3.4□□□□□ -1.86
UBE4A-203ENST00000545354 BOD1L1Q8NFC6 3051 aa3.4□□□□□ -1.86
UBE4A-203ENST00000545354 ITPR3Q14573 2671 aa3.4□□□□□ -1.86
UBE4A-203ENST00000545354 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.4□□□□□ -1.86
UBE4A-203ENST00000545354 H0YGG7 62 aa3.4□□□□□ -1.86
UBE4A-203ENST00000545354 IGLV1-47P01700 117 aa3.4□□□□□ -1.86
UBE4A-203ENST00000545354 COX7BP24311 80 aa3.4□□□□□ -1.86
UBE4A-203ENST00000545354 CMC4P56277 68 aaPredicted RBP3.4□□□□□ -1.86
UBE4A-203ENST00000545354 NNATQ16517 81 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms