RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 UBE2AP49459 152 aa3.44□□□□□ -1.86
CIT-215ENST00000544800 KIAA0087Q14695 138 aa3.44□□□□□ -1.86
CIT-215ENST00000544800 PACRGQ96M98 296 aaPredicted RBP3.44□□□□□ -1.86
CIT-215ENST00000544800 ST20Q9HBF5 79 aa3.44□□□□□ -1.86
CIT-215ENST00000544800 XAGE1AQ9HD64 81 aa3.44□□□□□ -1.86
CIT-215ENST00000544800 IGHV3OR16-9A0A0B4J2B5 98 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 TRBV6-5A0A0K0K1A5 114 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 TRBV30A0A0K0K1B3 111 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 XKRY2A2RUG3 117 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 PRSS2P07478 247 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 RPL35P42766 123 aaKnown RBP3.43□□□□□ -1.86
CIT-215ENST00000544800 MRPL55Q7Z7F7 128 aaKnown RBP3.43□□□□□ -1.86
CIT-215ENST00000544800 KRTAP13-1Q8IUC0 172 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 C9orf62Q8N4C0 152 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 ENKURQ8TC29 256 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
CIT-215ENST00000544800 ZNF727A8MUV8 499 aa3.42□□□□□ -1.86
CIT-215ENST00000544800 PFDN1O60925 122 aa3.42□□□□□ -1.86
CIT-215ENST00000544800 UPK1BO75841 260 aa3.42□□□□□ -1.86
CIT-215ENST00000544800 POLR2KP53803 58 aaKnown RBP3.42□□□□□ -1.86
CIT-215ENST00000544800 CENPWQ5EE01 88 aa3.42□□□□□ -1.86
CIT-215ENST00000544800 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
CIT-215ENST00000544800 TEX261Q6UWH6 196 aa3.42□□□□□ -1.86
CIT-215ENST00000544800 LINC00167Q96N53 147 aa3.42□□□□□ -1.86
CIT-215ENST00000544800 CSDC2Q9Y534 153 aaKnown RBP3.42□□□□□ -1.86
CIT-215ENST00000544800 BORCS7-ASMTA0A0B4J1R7 106 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 RAB19A4D1S5 217 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 FCER1GP30273 86 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
CIT-215ENST00000544800 PRLHP81277 87 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 PAPPA-AS1Q5QFB9 102 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 SMIM15Q7Z3B0 74 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 Q8N9P0 234 aaPredicted RBP3.41□□□□□ -1.86
CIT-215ENST00000544800 CNFNQ9BYD5 112 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 TP73-AS1Q9UF72 201 aa3.41□□□□□ -1.86
CIT-215ENST00000544800 TRBV27A0A0K0K1C4 114 aa3.4□□□□□ -1.87
CIT-215ENST00000544800 SMAGPQ0VAQ4 97 aa3.4□□□□□ -1.87
CIT-215ENST00000544800 PNRC1Q12796 327 aaPredicted RBP3.4□□□□□ -1.87
CIT-215ENST00000544800 Q5BKY6 102 aa3.4□□□□□ -1.87
CIT-215ENST00000544800 KCNRGQ8N5I3 272 aa3.4□□□□□ -1.87
CIT-215ENST00000544800 SFT2D1Q8WV19 159 aa3.4□□□□□ -1.87
CIT-215ENST00000544800 FAM104AQ969W3 186 aa3.4□□□□□ -1.87
CIT-215ENST00000544800 TGIF2-C20orf24A0A0A6YYL0 155 aa3.39□□□□□ -1.87
CIT-215ENST00000544800 IFITM10A6NMD0 228 aa3.39□□□□□ -1.87
CIT-215ENST00000544800 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
CIT-215ENST00000544800 RPL39P62891 51 aaKnown RBP3.39□□□□□ -1.87
CIT-215ENST00000544800 RPL32P62910 135 aaKnown RBP3.39□□□□□ -1.87
CIT-215ENST00000544800 PLEKHB2Q96CS7 222 aa3.39□□□□□ -1.87
CIT-215ENST00000544800 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
CIT-215ENST00000544800 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 SCO1O75880 301 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 GNG4P50150 75 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 FAM19A1Q7Z5A9 133 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 FAM213BQ8TBF2 198 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 C11orf52Q96A22 123 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 FAM210AQ96ND0 272 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 TOMM7Q9P0U1 55 aa3.38□□□□□ -1.87
CIT-215ENST00000544800 TRBV20OR9-2A0A075B6H5 130 aa3.37□□□□□ -1.87
CIT-215ENST00000544800 IGLV5-37A0A075B6J1 123 aa3.37□□□□□ -1.87
CIT-215ENST00000544800 IGKV2-28A0A075B6P5 120 aa3.37□□□□□ -1.87
CIT-215ENST00000544800 IGKV2D-28P01615 120 aa3.37□□□□□ -1.87
CIT-215ENST00000544800 IGLV6-57P01721 117 aa3.37□□□□□ -1.87
CIT-215ENST00000544800 CCL20P78556 96 aa3.37□□□□□ -1.87
CIT-215ENST00000544800 MBD3L1Q8WWY6 194 aa3.37□□□□□ -1.87
CIT-215ENST00000544800 FXYD6-FXYD2A0A087WZ82 144 aa3.36□□□□□ -1.87
CIT-215ENST00000544800 VPREB1P12018 145 aa3.36□□□□□ -1.87
CIT-215ENST00000544800 RAB4AP20338 218 aa3.36□□□□□ -1.87
CIT-215ENST00000544800 CKS1BP61024 79 aa3.36□□□□□ -1.87
CIT-215ENST00000544800 HBBP68871 147 aa3.36□□□□□ -1.87
CIT-215ENST00000544800 AMN1Q8IY45 258 aa3.36□□□□□ -1.87
CIT-215ENST00000544800 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 MRPS36P82909 103 aaKnown RBP3.35□□□□□ -1.87
CIT-215ENST00000544800 IFITM3Q01628 133 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 C6orf226Q5I0X4 101 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 CBLN2Q8IUK8 224 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 NKAPP1Q8N9T2 125 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 SMIM12Q96EX1 92 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 HIGD2AQ9BW72 106 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 BIN3Q9NQY0 253 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 GNG13Q9P2W3 67 aa3.35□□□□□ -1.87
CIT-215ENST00000544800 K7EN84 100 aa3.34□□□□□ -1.87
CIT-215ENST00000544800 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
CIT-215ENST00000544800 SPRR4Q96PI1 79 aa3.34□□□□□ -1.87
CIT-215ENST00000544800 GNB1LQ9BYB4 327 aa3.34□□□□□ -1.87
CIT-215ENST00000544800 TMEM126AQ9H061 195 aa3.34□□□□□ -1.87
CIT-215ENST00000544800 TMEM191AQ9H0A3 160 aa3.34□□□□□ -1.87
CIT-215ENST00000544800 SPANXA1Q9NS26 97 aa3.34□□□□□ -1.87
CIT-215ENST00000544800 MED9Q9NWA0 146 aa3.34□□□□□ -1.87
CIT-215ENST00000544800 GATCO43716 136 aaKnown RBP3.33□□□□□ -1.88
CIT-215ENST00000544800 SNRPEP62304 92 aaKnown RBP3.33□□□□□ -1.88
CIT-215ENST00000544800 UBE2V1Q13404 147 aa3.33□□□□□ -1.88
CIT-215ENST00000544800 Q6ZN92 141 aa3.33□□□□□ -1.88
CIT-215ENST00000544800 ALKBH7Q9BT30 221 aaPredicted RBP3.33□□□□□ -1.88
CIT-215ENST00000544800 GEMIN7Q9H840 131 aaKnown RBP3.33□□□□□ -1.88
CIT-215ENST00000544800 MANBALQ9NQG1 85 aa3.33□□□□□ -1.88
CIT-215ENST00000544800 F8VRH5 84 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms