RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
LMO3-231ENST00000544754 DNAH6Q9C0G6 4158 aa8.19□□□□□ -1.1
LMO3-231ENST00000544754 ZNF815PA8K554 130 aa8.19□□□□□ -1.1
LMO3-231ENST00000544754 ZNF561-AS1K7EIQ3 104 aa8.19□□□□□ -1.1
LMO3-231ENST00000544754 NDUFA1O15239 70 aa8.19□□□□□ -1.1
LMO3-231ENST00000544754 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
LMO3-231ENST00000544754 BOD1L2Q8IYS8 172 aa8.19□□□□□ -1.1
LMO3-231ENST00000544754 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
LMO3-231ENST00000544754 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
LMO3-231ENST00000544754 PRO1933Q9H354 126 aa8.19□□□□□ -1.1
LMO3-231ENST00000544754 MYMXA0A1B0GTQ4 84 aa8.18□□□□□ -1.1
LMO3-231ENST00000544754 RTL8CO15255 209 aa8.18□□□□□ -1.1
LMO3-231ENST00000544754 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
LMO3-231ENST00000544754 CXCL5P42830 114 aa8.18□□□□□ -1.1
LMO3-231ENST00000544754 CKS1BP61024 79 aa8.18□□□□□ -1.1
LMO3-231ENST00000544754 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
LMO3-231ENST00000544754 KMT2AQ03164 3969 aa8.17□□□□□ -1.1
LMO3-231ENST00000544754 A0A087WTM6 91 aa8.17□□□□□ -1.1
LMO3-231ENST00000544754 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
LMO3-231ENST00000544754 SLC25A34Q6PIV7 304 aa8.17□□□□□ -1.1
LMO3-231ENST00000544754 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
LMO3-231ENST00000544754 DLEU1O43261 78 aa8.16□□□□□ -1.1
LMO3-231ENST00000544754 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
LMO3-231ENST00000544754 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
LMO3-231ENST00000544754 A0A0J9YXY3 114 aa8.15□□□□□ -1.1
LMO3-231ENST00000544754 F8WDY8 70 aa8.15□□□□□ -1.1
LMO3-231ENST00000544754 SLPIP03973 132 aa8.15□□□□□ -1.1
LMO3-231ENST00000544754 HERV-K104P63124 156 aa8.15□□□□□ -1.1
LMO3-231ENST00000544754 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
LMO3-231ENST00000544754 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
LMO3-231ENST00000544754 Q6ZRU5 148 aa8.15□□□□□ -1.1
LMO3-231ENST00000544754 UQCR10Q9UDW1 63 aa8.15□□□□□ -1.1
LMO3-231ENST00000544754 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
LMO3-231ENST00000544754 Q8N814 137 aa8.14□□□□□ -1.11
LMO3-231ENST00000544754 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
LMO3-231ENST00000544754 TSTD3H0UI37 97 aa8.13□□□□□ -1.11
LMO3-231ENST00000544754 C9orf116Q5BN46 136 aaPredicted RBP8.13□□□□□ -1.11
LMO3-231ENST00000544754 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
LMO3-231ENST00000544754 C2orf91Q6ZV80 131 aa8.13□□□□□ -1.11
LMO3-231ENST00000544754 CARD19Q96LW7 228 aa8.13□□□□□ -1.11
LMO3-231ENST00000544754 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
LMO3-231ENST00000544754 TMEM238LA0A1B0GVL6 79 aa8.12□□□□□ -1.11
LMO3-231ENST00000544754 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
LMO3-231ENST00000544754 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
LMO3-231ENST00000544754 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
LMO3-231ENST00000544754 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
LMO3-231ENST00000544754 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
LMO3-231ENST00000544754 A0A0U1RRA0 63 aa8.1□□□□□ -1.11
LMO3-231ENST00000544754 TIMM17BO60830 172 aa8.1□□□□□ -1.11
LMO3-231ENST00000544754 PFN2P35080 140 aa8.1□□□□□ -1.11
LMO3-231ENST00000544754 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
LMO3-231ENST00000544754 LITAFQ99732 161 aa8.1□□□□□ -1.11
LMO3-231ENST00000544754 HIGD1BQ9P298 99 aa8.1□□□□□ -1.11
LMO3-231ENST00000544754 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.09□□□□□ -1.11
LMO3-231ENST00000544754 HNRNPA3P51991 378 aaKnown RBP8.09□□□□□ -1.11
LMO3-231ENST00000544754 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
LMO3-231ENST00000544754 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.11
LMO3-231ENST00000544754 LINC00587B1AMM8 73 aa8.08□□□□□ -1.12
LMO3-231ENST00000544754 TMEM238C9JI98 176 aa8.08□□□□□ -1.12
LMO3-231ENST00000544754 LINC00158P58513 81 aa8.08□□□□□ -1.12
LMO3-231ENST00000544754 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
LMO3-231ENST00000544754 COX17Q14061 63 aa8.08□□□□□ -1.12
LMO3-231ENST00000544754 HYDINQ4G0P3 5121 aa8.07□□□□□ -1.12
LMO3-231ENST00000544754 LINC00336Q6ZUF6 198 aa8.07□□□□□ -1.12
LMO3-231ENST00000544754 DAND5Q8N907 189 aa8.07□□□□□ -1.12
LMO3-231ENST00000544754 C9orf163Q8N9P6 203 aa8.07□□□□□ -1.12
LMO3-231ENST00000544754 SPANXB1Q9NS25 103 aaPredicted RBP8.07□□□□□ -1.12
LMO3-231ENST00000544754 SACSQ9NZJ4 4579 aa8.07□□□□□ -1.12
LMO3-231ENST00000544754 DDTP30046 118 aa8.06□□□□□ -1.12
LMO3-231ENST00000544754 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
LMO3-231ENST00000544754 MIR7-3HGQ8N6C7 128 aa8.06□□□□□ -1.12
LMO3-231ENST00000544754 SPANXDQ9BXN6 97 aa8.06□□□□□ -1.12
LMO3-231ENST00000544754 SPANXCQ9NY87 97 aa8.06□□□□□ -1.12
LMO3-231ENST00000544754 NDUFC2-KCTD14E9PQ53 114 aa8.05□□□□□ -1.12
LMO3-231ENST00000544754 TLX1NBP0CAT3 122 aa8.05□□□□□ -1.12
LMO3-231ENST00000544754 LOC107984640A0A0U1RRK4 108 aa8.04□□□□□ -1.12
LMO3-231ENST00000544754 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
LMO3-231ENST00000544754 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
LMO3-231ENST00000544754 NPC2P61916 151 aa8.04□□□□□ -1.12
LMO3-231ENST00000544754 SRSF9Q13242 221 aaKnown RBP eCLIP8.04□□□□□ -1.12
LMO3-231ENST00000544754 LINC01620Q4KN68 170 aa8.04□□□□□ -1.12
LMO3-231ENST00000544754 Q6ZRP5 223 aa8.04□□□□□ -1.12
LMO3-231ENST00000544754 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
LMO3-231ENST00000544754 DNAH2Q9P225 4427 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 PCP4L1A6NKN8 68 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
LMO3-231ENST00000544754 CTAG1AP78358 180 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
LMO3-231ENST00000544754 HSD52Q0P140 79 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 TAL2Q16559 108 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 SOSTDC1Q6X4U4 206 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 Q6ZVH6 145 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 LINC00308Q8TCZ7 52 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
LMO3-231ENST00000544754 RYR2Q92736 4967 aa8.02□□□□□ -1.12
LMO3-231ENST00000544754 KMT2CQ8NEZ4 4911 aaKnown RBP8.02□□□□□ -1.13
LMO3-231ENST00000544754 FRAS1Q86XX4 4008 aa8.02□□□□□ -1.13
LMO3-231ENST00000544754 GAGE2EQ4V326 116 aa8.02□□□□□ -1.13
LMO3-231ENST00000544754 MUSTN1Q8IVN3 82 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms