RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 C20orf202A1L168 122 aa8.49□□□□□ -1.05
DDX11-227ENST00000544652 AKR1D1P51857 326 aa8.49□□□□□ -1.05
DDX11-227ENST00000544652 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
DDX11-227ENST00000544652 DNAH11Q96DT5 4516 aa8.48□□□□□ -1.05
DDX11-227ENST00000544652 IGLV5-52A0A0A0MRZ9 124 aa8.48□□□□□ -1.05
DDX11-227ENST00000544652 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
DDX11-227ENST00000544652 COX7B2Q8TF08 81 aa8.48□□□□□ -1.05
DDX11-227ENST00000544652 PLA2G1BP04054 148 aaKnown RBP8.47□□□□□ -1.05
DDX11-227ENST00000544652 PRSS2P07478 247 aa8.47□□□□□ -1.05
DDX11-227ENST00000544652 FUSP35637 526 aaKnown RBP eCLIP8.47□□□□□ -1.05
DDX11-227ENST00000544652 SYCNQ0VAF6 134 aa8.47□□□□□ -1.05
DDX11-227ENST00000544652 CAMK2N2Q96S95 79 aa8.47□□□□□ -1.05
DDX11-227ENST00000544652 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
DDX11-227ENST00000544652 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.46□□□□□ -1.06
DDX11-227ENST00000544652 NDUFA1O15239 70 aa8.46□□□□□ -1.06
DDX11-227ENST00000544652 CXCL5P42830 114 aa8.46□□□□□ -1.06
DDX11-227ENST00000544652 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
DDX11-227ENST00000544652 C6orf226Q5I0X4 101 aa8.46□□□□□ -1.06
DDX11-227ENST00000544652 Q6ZRU5 148 aa8.46□□□□□ -1.06
DDX11-227ENST00000544652 CARD19Q96LW7 228 aa8.46□□□□□ -1.06
DDX11-227ENST00000544652 E9PLD3 99 aa8.44□□□□□ -1.06
DDX11-227ENST00000544652 LEPROTO15243 131 aa8.44□□□□□ -1.06
DDX11-227ENST00000544652 CKS1BP61024 79 aa8.44□□□□□ -1.06
DDX11-227ENST00000544652 HERVK_113P61574 105 aa8.44□□□□□ -1.06
DDX11-227ENST00000544652 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
DDX11-227ENST00000544652 C2orf82Q6UX34 121 aa8.44□□□□□ -1.06
DDX11-227ENST00000544652 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
DDX11-227ENST00000544652 HECTD4Q9Y4D8 3996 aa8.44□□□□□ -1.06
DDX11-227ENST00000544652 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
DDX11-227ENST00000544652 GCSHP23434 173 aa8.43□□□□□ -1.06
DDX11-227ENST00000544652 C6orf48Q9UBA6 75 aa8.43□□□□□ -1.06
DDX11-227ENST00000544652 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
DDX11-227ENST00000544652 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
DDX11-227ENST00000544652 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
DDX11-227ENST00000544652 SDIM1Q6ZPB5 146 aa8.42□□□□□ -1.06
DDX11-227ENST00000544652 ATOH7Q8N100 152 aa8.42□□□□□ -1.06
DDX11-227ENST00000544652 STPG4Q8N801 248 aa8.42□□□□□ -1.06
DDX11-227ENST00000544652 PLEKHB2Q96CS7 222 aa8.42□□□□□ -1.06
DDX11-227ENST00000544652 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
DDX11-227ENST00000544652 DNAH5Q8TE73 4624 aa8.42□□□□□ -1.06
DDX11-227ENST00000544652 SCGB1D1O95968 90 aa8.41□□□□□ -1.06
DDX11-227ENST00000544652 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
DDX11-227ENST00000544652 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
DDX11-227ENST00000544652 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
DDX11-227ENST00000544652 J3QQQ9 107 aa8.4□□□□□ -1.06
DDX11-227ENST00000544652 KRTAP10-1P60331 282 aa8.4□□□□□ -1.06
DDX11-227ENST00000544652 PKIGQ9Y2B9 76 aa8.4□□□□□ -1.06
DDX11-227ENST00000544652 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
DDX11-227ENST00000544652 LOC107984640A0A0U1RRK4 108 aa8.38□□□□□ -1.07
DDX11-227ENST00000544652 NMUP48645 174 aa8.38□□□□□ -1.07
DDX11-227ENST00000544652 Q6ZSA8 131 aa8.38□□□□□ -1.07
DDX11-227ENST00000544652 B5MCH6 92 aa8.37□□□□□ -1.07
DDX11-227ENST00000544652 LGALS3P17931 250 aaKnown RBP8.37□□□□□ -1.07
DDX11-227ENST00000544652 HERV-K104P63124 156 aa8.37□□□□□ -1.07
DDX11-227ENST00000544652 CIRBPQ14011 172 aaKnown RBP8.37□□□□□ -1.07
DDX11-227ENST00000544652 MAJINQ3KP22 176 aa8.37□□□□□ -1.07
DDX11-227ENST00000544652 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
DDX11-227ENST00000544652 PYY3Q5JQD4 70 aa8.37□□□□□ -1.07
DDX11-227ENST00000544652 NDUFA12Q9UI09 145 aa8.37□□□□□ -1.07
DDX11-227ENST00000544652 MYMXA0A1B0GTQ4 84 aa8.36□□□□□ -1.07
DDX11-227ENST00000544652 NDUFC2-KCTD14E9PQ53 114 aa8.36□□□□□ -1.07
DDX11-227ENST00000544652 COX17Q14061 63 aa8.36□□□□□ -1.07
DDX11-227ENST00000544652 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
DDX11-227ENST00000544652 A0A096LNI7 61 aa8.35□□□□□ -1.07
DDX11-227ENST00000544652 PTTG1IPP53801 180 aa8.35□□□□□ -1.07
DDX11-227ENST00000544652 Q6ZRP5 223 aa8.35□□□□□ -1.07
DDX11-227ENST00000544652 FAM30AQ9NZY2 134 aa8.35□□□□□ -1.07
DDX11-227ENST00000544652 ERG28Q9UKR5 140 aa8.35□□□□□ -1.07
DDX11-227ENST00000544652 EPPK1P58107 5090 aaKnown RBP8.34□□□□□ -1.07
DDX11-227ENST00000544652 C9orf118A6NHY6 69 aa8.34□□□□□ -1.07
DDX11-227ENST00000544652 HSBP1L1C9JCN9 74 aa8.34□□□□□ -1.07
DDX11-227ENST00000544652 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
DDX11-227ENST00000544652 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
DDX11-227ENST00000544652 LOC105371267A0A1B0GV96 52 aa8.33□□□□□ -1.08
DDX11-227ENST00000544652 PANO1I0J062 215 aa8.33□□□□□ -1.08
DDX11-227ENST00000544652 CHTF8P0CG12 524 aa8.33□□□□□ -1.08
DDX11-227ENST00000544652 RPL18AQ02543 176 aaKnown RBP8.33□□□□□ -1.08
DDX11-227ENST00000544652 SPACA4Q8TDM5 124 aa8.33□□□□□ -1.08
DDX11-227ENST00000544652 TTTY13Q9BZ97 58 aa8.33□□□□□ -1.08
DDX11-227ENST00000544652 LINC00587B1AMM8 73 aa8.32□□□□□ -1.08
DDX11-227ENST00000544652 GAGE2BQ13066 116 aa8.32□□□□□ -1.08
DDX11-227ENST00000544652 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
DDX11-227ENST00000544652 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
DDX11-227ENST00000544652 IGKV2-24A0A0C4DH68 120 aa8.31□□□□□ -1.08
DDX11-227ENST00000544652 A0A0J9YXY3 114 aa8.31□□□□□ -1.08
DDX11-227ENST00000544652 ZNF815PA8K554 130 aa8.31□□□□□ -1.08
DDX11-227ENST00000544652 PFN2P35080 140 aa8.31□□□□□ -1.08
DDX11-227ENST00000544652 PCP2Q8IVA1 136 aa8.31□□□□□ -1.08
DDX11-227ENST00000544652 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
DDX11-227ENST00000544652 SMIM13P0DJ93 91 aa8.3□□□□□ -1.08
DDX11-227ENST00000544652 GAGE2EQ4V326 116 aa8.3□□□□□ -1.08
DDX11-227ENST00000544652 MEIG1Q5JSS6 88 aa8.3□□□□□ -1.08
DDX11-227ENST00000544652 C9orf129Q5T035 196 aaKnown RBP8.3□□□□□ -1.08
DDX11-227ENST00000544652 VAMP8Q9BV40 100 aa8.3□□□□□ -1.08
DDX11-227ENST00000544652 GAGE2DQ9UEU5 116 aa8.3□□□□□ -1.08
DDX11-227ENST00000544652 TIMM17BO60830 172 aa8.29□□□□□ -1.08
DDX11-227ENST00000544652 CDK2AP2O75956 126 aa8.29□□□□□ -1.08
DDX11-227ENST00000544652 XGP55808 180 aa8.29□□□□□ -1.08
DDX11-227ENST00000544652 PAM16Q9Y3D7 125 aa8.29□□□□□ -1.08
DDX11-227ENST00000544652 LRP1BQ9NZR2 4599 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms