RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 NIPBLQ6KC79 2804 aaeCLIP2.55□□□□□ -2
BRCA2-206ENST00000544455 ZFYVE26Q68DK2 2539 aa2.55□□□□□ -2
BRCA2-206ENST00000544455 GAGE2AQ6NT46 116 aa2.55□□□□□ -2
BRCA2-206ENST00000544455 ACYP1P07311 99 aa2.55□□□□□ -2
BRCA2-206ENST00000544455 PPDPFQ9H3Y8 114 aa2.55□□□□□ -2
BRCA2-206ENST00000544455 RPL18AQ02543 176 aaKnown RBP2.55□□□□□ -2
BRCA2-206ENST00000544455 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
BRCA2-206ENST00000544455 MIFP14174 115 aa2.55□□□□□ -2
BRCA2-206ENST00000544455 SMCR5Q8TEV8 140 aa2.55□□□□□ -2
BRCA2-206ENST00000544455 SMIM9A6NGZ8 99 aa2.55□□□□□ -2
BRCA2-206ENST00000544455 SPTBN1Q01082 2364 aaKnown RBP2.55□□□□□ -2
BRCA2-206ENST00000544455 CENPEQ02224 2701 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 ESRGQ1W209 222 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 IBA57-AS1B1ANH7 110 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 CD164L2Q6UWJ8 174 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 GAGE2EQ4V326 116 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 GAGE2DQ9UEU5 116 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 A0A1B0GUV1 79 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 SNCGO76070 127 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
BRCA2-206ENST00000544455 SPAG11BQ08648 103 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 GAGE2BQ13066 116 aa2.54□□□□□ -2
BRCA2-206ENST00000544455 Q8IZM0 81 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 IGKV2D-24A0A075B6R9 120 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 DEFB131BA0A096LNP1 70 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 C6orf99Q4VX62 202 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 WFDC9Q8NEX5 89 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 SVIPQ8NHG7 77 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 TRAV13-2A0A0B4J235 113 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 FAM240AA0A1B0GVK7 77 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 CASC10Q5T4H9 136 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 AGRNO00468 2067 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 S100A7L2Q5SY68 101 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 TEX15Q9BXT5 2789 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 Q6ZRU5 148 aa2.53□□□□□ -2
BRCA2-206ENST00000544455 ACACBO00763 2458 aa2.53□□□□□ -2.01
BRCA2-206ENST00000544455 RPL28P46779 137 aaKnown RBP2.53□□□□□ -2.01
BRCA2-206ENST00000544455 ANAPC13Q9BS18 74 aa2.53□□□□□ -2.01
BRCA2-206ENST00000544455 LELP1Q5T871 98 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 M0R2N4 97 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 C6orf48Q9UBA6 75 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 NAV2Q8IVL1 2488 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 ZNF561-AS1K7EIQ3 104 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 DNAL4O96015 105 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 SDIM1Q6ZPB5 146 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 TRACP01848 142 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 C11orf45Q8TAV5 145 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 COPS9Q8WXC6 57 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 WNK2Q9Y3S1 2297 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 NHLRC4P0CG21 123 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-206ENST00000544455 A0A087WVE0 104 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 CAMK2N2Q96S95 79 aa2.52□□□□□ -2.01
BRCA2-206ENST00000544455 IGKV3D-7A0A0C4DH55 119 aa2.51□□□□□ -2.01
BRCA2-206ENST00000544455 TRBV10-3A0A0K0K1G6 114 aa2.51□□□□□ -2.01
BRCA2-206ENST00000544455 SPTAN1Q13813 2472 aaKnown RBP2.51□□□□□ -2.01
BRCA2-206ENST00000544455 FBN1P35555 2871 aaKnown RBP2.51□□□□□ -2.01
BRCA2-206ENST00000544455 CXCL5P42830 114 aa2.51□□□□□ -2.01
BRCA2-206ENST00000544455 PRR34Q9NV39 138 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 CCDC179H3BU77 68 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 ABCA12Q86UK0 2595 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 ITPR3Q14573 2671 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 RPL37AP8A6NKH3 93 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 C15orf56Q8N910 161 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 FAM208BQ5VWN6 2430 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 Q6ZRP5 223 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 ORMDL1Q9P0S3 153 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 FAM168BA1KXE4 195 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 SS18L2Q9UHA2 77 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 USP9YO00507 2555 aaPredicted RBP2.5□□□□□ -2.01
BRCA2-206ENST00000544455 Q6ZQY7 126 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 Q8N814 137 aa2.5□□□□□ -2.01
BRCA2-206ENST00000544455 KLK5Q9Y337 293 aaPredicted RBP2.49□□□□□ -2.01
BRCA2-206ENST00000544455 FAM236AA0A1B0GUQ0 79 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 FAM236BA0A1B0GV22 79 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 EGFEM1PQ0D2K5 195 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 C1orf43Q9BWL3 253 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 LINC00846Q9NV44 126 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 B5MCH6 92 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 MDFIQ99750 246 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 ANKRD17O75179 2603 aaKnown RBP2.49□□□□□ -2.01
BRCA2-206ENST00000544455 INAFM2P0DMQ5 153 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 LINC00643Q86TS7 51 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 DEFB105AQ8NG35 78 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 TMEM126AQ9H061 195 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 LINC00588Q9Y4M8 146 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 MYO18BQ8IUG5 2567 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 K7EIL1 84 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 CRYGAP11844 174 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 FUSP35637 526 aaKnown RBP eCLIP2.49□□□□□ -2.01
BRCA2-206ENST00000544455 NDUFV3P56181 108 aaKnown RBP2.49□□□□□ -2.01
BRCA2-206ENST00000544455 H0YGX0 51 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 LAMTOR3Q9UHA4 124 aa2.49□□□□□ -2.01
BRCA2-206ENST00000544455 EPG5Q9HCE0 2579 aa2.48□□□□□ -2.01
BRCA2-206ENST00000544455 hADV29S1A0JD25 119 aa2.48□□□□□ -2.01
BRCA2-206ENST00000544455 WIPF1O43516 503 aa2.48□□□□□ -2.01
BRCA2-206ENST00000544455 SERTAD4-AS1Q5TG53 156 aa2.48□□□□□ -2.01
BRCA2-206ENST00000544455 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
BRCA2-206ENST00000544455 KRTAP26-1Q6PEX3 210 aa2.48□□□□□ -2.01
BRCA2-206ENST00000544455 SCXQ7RTU7 201 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms