RNA–Protein interactions for RNA: ENST00000543368.1

NPIPB3-212, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-212ENST00000543368 NDUFC2-KCTD14E9PQ53 114 aa6.42□□□□□ -1.38
NPIPB3-212ENST00000543368 HNRNPA3P51991 378 aaKnown RBP6.42□□□□□ -1.38
NPIPB3-212ENST00000543368 PMVKQ15126 192 aa6.42□□□□□ -1.38
NPIPB3-212ENST00000543368 REG3GQ6UW15 175 aa6.42□□□□□ -1.38
NPIPB3-212ENST00000543368 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
NPIPB3-212ENST00000543368 A0A1W2PNN7 141 aa6.41□□□□□ -1.38
NPIPB3-212ENST00000543368 H3BRM9 83 aa6.41□□□□□ -1.38
NPIPB3-212ENST00000543368 ODF1Q14990 250 aa6.41□□□□□ -1.38
NPIPB3-212ENST00000543368 PDZD11Q5EBL8 140 aa6.41□□□□□ -1.38
NPIPB3-212ENST00000543368 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
NPIPB3-212ENST00000543368 LINC00469Q8N7U9 141 aa6.41□□□□□ -1.38
NPIPB3-212ENST00000543368 TOMM7Q9P0U1 55 aa6.41□□□□□ -1.38
NPIPB3-212ENST00000543368 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
NPIPB3-212ENST00000543368 F8VRH5 84 aa6.4□□□□□ -1.38
NPIPB3-212ENST00000543368 LINC00614P0C842 121 aa6.4□□□□□ -1.38
NPIPB3-212ENST00000543368 GAGE2EQ4V326 116 aa6.4□□□□□ -1.38
NPIPB3-212ENST00000543368 CST9LQ9H4G1 147 aa6.4□□□□□ -1.38
NPIPB3-212ENST00000543368 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.38
NPIPB3-212ENST00000543368 CDKN2A-AS1Q9UH64 79 aa6.4□□□□□ -1.38
NPIPB3-212ENST00000543368 ATP5LO75964 103 aa6.39□□□□□ -1.39
NPIPB3-212ENST00000543368 HBDP02042 147 aa6.39□□□□□ -1.39
NPIPB3-212ENST00000543368 ZC2HC1BQ5TFG8 222 aa6.39□□□□□ -1.39
NPIPB3-212ENST00000543368 C2orf82Q6UX34 121 aa6.38□□□□□ -1.39
NPIPB3-212ENST00000543368 C18orf32Q8TCD1 76 aa6.38□□□□□ -1.39
NPIPB3-212ENST00000543368 SMIM1B2RUZ4 78 aa6.37□□□□□ -1.39
NPIPB3-212ENST00000543368 SFTA2Q6UW10 78 aa6.37□□□□□ -1.39
NPIPB3-212ENST00000543368 COX7B2Q8TF08 81 aa6.37□□□□□ -1.39
NPIPB3-212ENST00000543368 LINC01600Q96MT4 127 aa6.37□□□□□ -1.39
NPIPB3-212ENST00000543368 M0QXV9 152 aa6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 IGLC3P0DOY3 106 aa6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 UBE2BP63146 152 aa6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 SRSF9Q13242 221 aaKnown RBP eCLIP6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 LBHQ53QV2 105 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 C1orf137Q5JT78 98 aa6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 PHF5AQ7RTV0 110 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 FAM19A5Q7Z5A7 132 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 CHCHD1Q96BP2 118 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
NPIPB3-212ENST00000543368 NDUFA6P56556 154 aa6.35□□□□□ -1.39
NPIPB3-212ENST00000543368 DIRC1Q969H9 104 aa6.35□□□□□ -1.39
NPIPB3-212ENST00000543368 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
NPIPB3-212ENST00000543368 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
NPIPB3-212ENST00000543368 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
NPIPB3-212ENST00000543368 NUPR1O60356 82 aa6.33□□□□□ -1.4
NPIPB3-212ENST00000543368 IGLV7-43P04211 117 aa6.33□□□□□ -1.4
NPIPB3-212ENST00000543368 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
NPIPB3-212ENST00000543368 C9orf129Q5T035 196 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-212ENST00000543368 PLA2G2DQ9UNK4 145 aa6.33□□□□□ -1.4
NPIPB3-212ENST00000543368 A0A096LNJ9 63 aa6.32□□□□□ -1.4
NPIPB3-212ENST00000543368 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
NPIPB3-212ENST00000543368 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
NPIPB3-212ENST00000543368 URB1-AS1Q96HZ7 61 aa6.32□□□□□ -1.4
NPIPB3-212ENST00000543368 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
NPIPB3-212ENST00000543368 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
NPIPB3-212ENST00000543368 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
NPIPB3-212ENST00000543368 ZNF22P17026 224 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-212ENST00000543368 COX17Q14061 63 aa6.31□□□□□ -1.4
NPIPB3-212ENST00000543368 HSBP1O75506 76 aa6.3□□□□□ -1.4
NPIPB3-212ENST00000543368 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
NPIPB3-212ENST00000543368 IFI27L1Q96BM0 104 aa6.3□□□□□ -1.4
NPIPB3-212ENST00000543368 XAGE1AQ9HD64 81 aa6.3□□□□□ -1.4
NPIPB3-212ENST00000543368 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-212ENST00000543368 C22orf24Q9Y442 160 aa6.3□□□□□ -1.4
NPIPB3-212ENST00000543368 H0Y9J4 135 aa6.29□□□□□ -1.4
NPIPB3-212ENST00000543368 PMCHL1Q16048 86 aa6.29□□□□□ -1.4
NPIPB3-212ENST00000543368 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-212ENST00000543368 NKAPP1Q8N9T2 125 aa6.29□□□□□ -1.4
NPIPB3-212ENST00000543368 IGLV5-37A0A075B6J1 123 aa6.28□□□□□ -1.4
NPIPB3-212ENST00000543368 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
NPIPB3-212ENST00000543368 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
NPIPB3-212ENST00000543368 CBLN2Q8IUK8 224 aa6.28□□□□□ -1.4
NPIPB3-212ENST00000543368 HERC1Q15751 4861 aa6.28□□□□□ -1.4
NPIPB3-212ENST00000543368 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
NPIPB3-212ENST00000543368 LINC00587B1AMM8 73 aa6.27□□□□□ -1.41
NPIPB3-212ENST00000543368 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-212ENST00000543368 ERG28Q9UKR5 140 aa6.27□□□□□ -1.41
NPIPB3-212ENST00000543368 IGLV1-50A0A075B6I6 118 aa6.26□□□□□ -1.41
NPIPB3-212ENST00000543368 ZNF861PO60384 105 aa6.26□□□□□ -1.41
NPIPB3-212ENST00000543368 TRGC2P03986 189 aa6.26□□□□□ -1.41
NPIPB3-212ENST00000543368 RPL13AP40429 203 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-212ENST00000543368 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-212ENST00000543368 LEPROTL1O95214 131 aa6.25□□□□□ -1.41
NPIPB3-212ENST00000543368 PFN2P35080 140 aa6.25□□□□□ -1.41
NPIPB3-212ENST00000543368 HSPB8Q9UJY1 196 aa6.25□□□□□ -1.41
NPIPB3-212ENST00000543368 TMEM223A0PJW6 202 aa6.24□□□□□ -1.41
NPIPB3-212ENST00000543368 BCE1O60756 84 aa6.24□□□□□ -1.41
NPIPB3-212ENST00000543368 ATP6V1G1O75348 118 aa6.24□□□□□ -1.41
NPIPB3-212ENST00000543368 HERV-K104P63124 156 aa6.24□□□□□ -1.41
NPIPB3-212ENST00000543368 KRTAP11-1Q8IUC1 163 aa6.24□□□□□ -1.41
NPIPB3-212ENST00000543368 LINC00167Q96N53 147 aa6.24□□□□□ -1.41
NPIPB3-212ENST00000543368 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
NPIPB3-212ENST00000543368 PLNP26678 52 aa6.23□□□□□ -1.41
NPIPB3-212ENST00000543368 ZNF625Q96I27 306 aaPredicted RBP6.23□□□□□ -1.41
NPIPB3-212ENST00000543368 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
NPIPB3-212ENST00000543368 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
NPIPB3-212ENST00000543368 SERF1AO75920 110 aa6.22□□□□□ -1.41
NPIPB3-212ENST00000543368 HERVK_113P61574 105 aa6.22□□□□□ -1.41
NPIPB3-212ENST00000543368 SLC7A5P1Q8MH63 180 aa6.22□□□□□ -1.41
NPIPB3-212ENST00000543368 FAM19A2Q8N3H0 131 aa6.22□□□□□ -1.41
NPIPB3-212ENST00000543368 MAP1LC3CQ9BXW4 147 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms