RNA–Protein interactions for RNA: ENST00000542966.1

SCNN1A-219, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-219ENST00000542966 S100A2P29034 98 aa10.44□□□□□ -0.74
SCNN1A-219ENST00000542966 STPG4Q8N801 248 aa10.44□□□□□ -0.74
SCNN1A-219ENST00000542966 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
SCNN1A-219ENST00000542966 TRAV12-1A0A0B4J245 112 aa10.43□□□□□ -0.74
SCNN1A-219ENST00000542966 A0A0J9YXV3 536 aa10.43□□□□□ -0.74
SCNN1A-219ENST00000542966 LINC00242Q5T6M2 205 aa10.43□□□□□ -0.74
SCNN1A-219ENST00000542966 FAM19A3Q7Z5A8 133 aa10.43□□□□□ -0.74
SCNN1A-219ENST00000542966 FAT3Q8TDW7 4589 aa10.43□□□□□ -0.74
SCNN1A-219ENST00000542966 H0Y8G0 127 aa10.42□□□□□ -0.74
SCNN1A-219ENST00000542966 Q6ZRU5 148 aa10.42□□□□□ -0.74
SCNN1A-219ENST00000542966 PKIGQ9Y2B9 76 aa10.42□□□□□ -0.74
SCNN1A-219ENST00000542966 APOMO95445 188 aa10.41□□□□□ -0.74
SCNN1A-219ENST00000542966 C3orf79P0CE67 100 aa10.41□□□□□ -0.74
SCNN1A-219ENST00000542966 C7orf33Q8WU49 177 aa10.41□□□□□ -0.74
SCNN1A-219ENST00000542966 CAMK2N2Q96S95 79 aa10.41□□□□□ -0.74
SCNN1A-219ENST00000542966 MAP1LC3CQ9BXW4 147 aa10.41□□□□□ -0.74
SCNN1A-219ENST00000542966 SYS1-DBNDD2H3BUS1 97 aa10.4□□□□□ -0.74
SCNN1A-219ENST00000542966 SPAG11BQ08648 103 aa10.4□□□□□ -0.74
SCNN1A-219ENST00000542966 ODF1Q14990 250 aa10.4□□□□□ -0.74
SCNN1A-219ENST00000542966 LINC00474Q9P2X8 69 aa10.4□□□□□ -0.74
SCNN1A-219ENST00000542966 CHTOPQ9Y3Y2 248 aaKnown RBP10.4□□□□□ -0.74
SCNN1A-219ENST00000542966 OXTP01178 125 aa10.39□□□□□ -0.75
SCNN1A-219ENST00000542966 IGLC3P0DOY3 106 aa10.39□□□□□ -0.75
SCNN1A-219ENST00000542966 KRTDAPP60985 99 aa10.39□□□□□ -0.75
SCNN1A-219ENST00000542966 GAGE2BQ13066 116 aa10.39□□□□□ -0.75
SCNN1A-219ENST00000542966 MRPL35Q9NZE8 188 aaKnown RBP10.39□□□□□ -0.75
SCNN1A-219ENST00000542966 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
SCNN1A-219ENST00000542966 TINCRA0A1B0GVN0 87 aa10.38□□□□□ -0.75
SCNN1A-219ENST00000542966 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
SCNN1A-219ENST00000542966 PMCHL2Q9BQD1 86 aa10.38□□□□□ -0.75
SCNN1A-219ENST00000542966 LOC107984640A0A0U1RRK4 108 aa10.37□□□□□ -0.75
SCNN1A-219ENST00000542966 C11orf86A6NJI1 115 aa10.37□□□□□ -0.75
SCNN1A-219ENST00000542966 F8VRH5 84 aa10.37□□□□□ -0.75
SCNN1A-219ENST00000542966 SEC11AP67812 179 aa10.37□□□□□ -0.75
SCNN1A-219ENST00000542966 PET117Q6UWS5 81 aa10.37□□□□□ -0.75
SCNN1A-219ENST00000542966 ORAOV1Q8WV07 137 aa10.37□□□□□ -0.75
SCNN1A-219ENST00000542966 IGLV5-45A0A087WSX0 123 aa10.36□□□□□ -0.75
SCNN1A-219ENST00000542966 PTTG1IPP53801 180 aa10.36□□□□□ -0.75
SCNN1A-219ENST00000542966 HERVK_113P63121 156 aa10.36□□□□□ -0.75
SCNN1A-219ENST00000542966 LINC01545Q5VT33 79 aa10.36□□□□□ -0.75
SCNN1A-219ENST00000542966 OR10D4PQ8NGN7 298 aa10.36□□□□□ -0.75
SCNN1A-219ENST00000542966 GEMIN7Q9H840 131 aaKnown RBP10.36□□□□□ -0.75
SCNN1A-219ENST00000542966 ZNF22P17026 224 aaPredicted RBP10.35□□□□□ -0.75
SCNN1A-219ENST00000542966 CDKN2A-AS1Q9UH64 79 aa10.35□□□□□ -0.75
SCNN1A-219ENST00000542966 A0A087WZ39 114 aa10.34□□□□□ -0.75
SCNN1A-219ENST00000542966 RPL18AQ02543 176 aaKnown RBP10.34□□□□□ -0.75
SCNN1A-219ENST00000542966 SERTAD4-AS1Q5TG53 156 aa10.34□□□□□ -0.75
SCNN1A-219ENST00000542966 LINC00469Q8N7U9 141 aa10.34□□□□□ -0.75
SCNN1A-219ENST00000542966 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
SCNN1A-219ENST00000542966 DPM2O94777 84 aa10.32□□□□□ -0.76
SCNN1A-219ENST00000542966 A0A1W2PNN7 141 aa10.31□□□□□ -0.76
SCNN1A-219ENST00000542966 NDUFA1O15239 70 aa10.31□□□□□ -0.76
SCNN1A-219ENST00000542966 PLNP26678 52 aa10.31□□□□□ -0.76
SCNN1A-219ENST00000542966 RNF151Q2KHN1 245 aa10.31□□□□□ -0.76
SCNN1A-219ENST00000542966 C10orf25Q5T742 122 aa10.31□□□□□ -0.76
SCNN1A-219ENST00000542966 LINC01561Q8N1V8 128 aa10.31□□□□□ -0.76
SCNN1A-219ENST00000542966 C20orf202A1L168 122 aa10.3□□□□□ -0.76
SCNN1A-219ENST00000542966 IGKCP01834 107 aa10.3□□□□□ -0.76
SCNN1A-219ENST00000542966 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
SCNN1A-219ENST00000542966 SMIM1B2RUZ4 78 aa10.29□□□□□ -0.76
SCNN1A-219ENST00000542966 F8WDY8 70 aa10.29□□□□□ -0.76
SCNN1A-219ENST00000542966 SPINK8P0C7L1 97 aa10.29□□□□□ -0.76
SCNN1A-219ENST00000542966 C9orf116Q5BN46 136 aaPredicted RBP10.29□□□□□ -0.76
SCNN1A-219ENST00000542966 UNQ6190/PRO20217Q6UXQ8 127 aa10.29□□□□□ -0.76
SCNN1A-219ENST00000542966 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
SCNN1A-219ENST00000542966 H3BRM9 83 aa10.28□□□□□ -0.76
SCNN1A-219ENST00000542966 C6orf48Q9UBA6 75 aa10.28□□□□□ -0.76
SCNN1A-219ENST00000542966 UBR4Q5T4S7 5183 aa10.28□□□□□ -0.76
SCNN1A-219ENST00000542966 KIAA0087Q14695 138 aa10.27□□□□□ -0.77
SCNN1A-219ENST00000542966 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
SCNN1A-219ENST00000542966 Q6ZRP5 223 aa10.26□□□□□ -0.77
SCNN1A-219ENST00000542966 ATOH7Q8N100 152 aa10.26□□□□□ -0.77
SCNN1A-219ENST00000542966 C2orf82Q6UX34 121 aa10.25□□□□□ -0.77
SCNN1A-219ENST00000542966 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
SCNN1A-219ENST00000542966 SCGB1D1O95968 90 aa10.24□□□□□ -0.77
SCNN1A-219ENST00000542966 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
SCNN1A-219ENST00000542966 JOSD1Q15040 202 aaPredicted RBP10.24□□□□□ -0.77
SCNN1A-219ENST00000542966 GAGE2EQ4V326 116 aa10.24□□□□□ -0.77
SCNN1A-219ENST00000542966 PHF5AQ7RTV0 110 aaKnown RBP10.24□□□□□ -0.77
SCNN1A-219ENST00000542966 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
SCNN1A-219ENST00000542966 GAGE2DQ9UEU5 116 aa10.24□□□□□ -0.77
SCNN1A-219ENST00000542966 TLX1NBP0CAT3 122 aa10.23□□□□□ -0.77
SCNN1A-219ENST00000542966 PLA2G2DQ9UNK4 145 aa10.23□□□□□ -0.77
SCNN1A-219ENST00000542966 FAM168BA1KXE4 195 aa10.22□□□□□ -0.77
SCNN1A-219ENST00000542966 PRSS2P07478 247 aa10.22□□□□□ -0.77
SCNN1A-219ENST00000542966 AKR1D1P51857 326 aa10.22□□□□□ -0.77
SCNN1A-219ENST00000542966 Q8IZM0 81 aa10.22□□□□□ -0.77
SCNN1A-219ENST00000542966 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
SCNN1A-219ENST00000542966 TRBV30A0A0K0K1B3 111 aa10.21□□□□□ -0.77
SCNN1A-219ENST00000542966 LOC105371267A0A1B0GV96 52 aa10.21□□□□□ -0.77
SCNN1A-219ENST00000542966 PYY3Q5JQD4 70 aa10.21□□□□□ -0.77
SCNN1A-219ENST00000542966 SPINK6Q6UWN8 80 aa10.21□□□□□ -0.77
SCNN1A-219ENST00000542966 TSPEAR-AS2P59090 65 aa10.2□□□□□ -0.78
SCNN1A-219ENST00000542966 HERVK_113P61574 105 aa10.2□□□□□ -0.78
SCNN1A-219ENST00000542966 FAM19A5Q7Z5A7 132 aaPredicted RBP10.2□□□□□ -0.78
SCNN1A-219ENST00000542966 PSORS1C2Q9UIG4 136 aa10.2□□□□□ -0.78
SCNN1A-219ENST00000542966 LEPROTO15243 131 aa10.19□□□□□ -0.78
SCNN1A-219ENST00000542966 CKS1BP61024 79 aa10.19□□□□□ -0.78
SCNN1A-219ENST00000542966 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
SCNN1A-219ENST00000542966 ANKRD39Q53RE8 183 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms