RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 KLK12Q9UKR0 248 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 TMEM170BQ5T4T1 132 aa4.83□□□□□ -1.64
CHMP4A-209ENST00000542700 CLPSL2Q6UWE3 100 aa4.83□□□□□ -1.64
CHMP4A-209ENST00000542700 LINC00518Q8N0U6 118 aa4.83□□□□□ -1.64
CHMP4A-209ENST00000542700 LINC00269Q8N2A0 174 aa4.83□□□□□ -1.64
CHMP4A-209ENST00000542700 FAM104AQ969W3 186 aa4.83□□□□□ -1.64
CHMP4A-209ENST00000542700 VAMP8Q9BV40 100 aa4.83□□□□□ -1.64
CHMP4A-209ENST00000542700 GEMIN7Q9H840 131 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-209ENST00000542700 hDV102S1A0JD36 115 aa4.82□□□□□ -1.64
CHMP4A-209ENST00000542700 C11orf86A6NJI1 115 aa4.82□□□□□ -1.64
CHMP4A-209ENST00000542700 SMIM6P0DI80 62 aa4.82□□□□□ -1.64
CHMP4A-209ENST00000542700 SEC11AP67812 179 aa4.82□□□□□ -1.64
CHMP4A-209ENST00000542700 PRR3P79522 188 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-209ENST00000542700 Q8N3U1 123 aa4.82□□□□□ -1.64
CHMP4A-209ENST00000542700 TRAV8-3A0A0A6YYJ7 113 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 LINC00959A0A1B0GUT2 108 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 CRPP02741 224 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 PLNP26678 52 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 UBE2D1P51668 147 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 HERVK_113P61574 105 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 REG3AQ06141 175 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 MAJINQ3KP22 176 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 SPATA45Q537H7 98 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 SPINK6Q6UWN8 80 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 STPG4Q8N801 248 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 UBE2WQ96B02 151 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 PRO1933Q9H354 126 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 PAM16Q9Y3D7 125 aa4.81□□□□□ -1.64
CHMP4A-209ENST00000542700 IGLV4-69A0A075B6H9 119 aa4.8□□□□□ -1.64
CHMP4A-209ENST00000542700 IGLV10-54A0A075B6I4 117 aa4.8□□□□□ -1.64
CHMP4A-209ENST00000542700 TINCRA0A1B0GVN0 87 aa4.8□□□□□ -1.64
CHMP4A-209ENST00000542700 CCL25O15444 150 aa4.8□□□□□ -1.64
CHMP4A-209ENST00000542700 IGLC3P0DOY3 106 aa4.8□□□□□ -1.64
CHMP4A-209ENST00000542700 COX6A2Q02221 97 aa4.8□□□□□ -1.64
CHMP4A-209ENST00000542700 C4orf48Q5BLP8 95 aa4.8□□□□□ -1.64
CHMP4A-209ENST00000542700 LINC00242Q5T6M2 205 aa4.8□□□□□ -1.64
CHMP4A-209ENST00000542700 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 H3BRM9 83 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 ZNF22P17026 224 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 HERVK_113P63121 156 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 ANKRD39Q53RE8 183 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 ENHOQ6UWT2 76 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 LINC00469Q8N7U9 141 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 DPH3Q96FX2 82 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 COX11Q9Y6N1 276 aa4.79□□□□□ -1.64
CHMP4A-209ENST00000542700 IGKV2D-24A0A075B6R9 120 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 A0A087WYN8 130 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 TRAV8-4A0A0B4J246 113 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 GAGE12HA6NDE8 117 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 SPINK8P0C7L1 97 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 XCL1P47992 114 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 NMUP48645 174 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 CHCHD10Q8WYQ3 142 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 C14orf144Q96I85 54 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 CDKN2A-AS1Q9UH64 79 aa4.78□□□□□ -1.64
CHMP4A-209ENST00000542700 TMEM223A0PJW6 202 aa4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 LEPROTO15243 131 aa4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 LGALS3P17931 250 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 MALP21145 153 aa4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 CIRBPQ14011 172 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 MIAQ16674 131 aa4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 RMI2Q96E14 147 aa4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 TOMM7Q9P0U1 55 aa4.77□□□□□ -1.65
CHMP4A-209ENST00000542700 PCP4L1A6NKN8 68 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 CHTF8P0CG12 524 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 CD164L2Q6UWJ8 174 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 SDIM1Q6ZPB5 146 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 C9orf163Q8N9P6 203 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 PLEKHB2Q96CS7 222 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 C1orf43Q9BWL3 253 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 PRR34Q9NV39 138 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 PSORS1C2Q9UIG4 136 aa4.76□□□□□ -1.65
CHMP4A-209ENST00000542700 IGKV2D-26A0A0A0MRZ7 120 aa4.75□□□□□ -1.65
CHMP4A-209ENST00000542700 IGHV3OR16-9A0A0B4J2B5 98 aa4.75□□□□□ -1.65
CHMP4A-209ENST00000542700 IGHV1-58A0A0C4DH39 117 aa4.75□□□□□ -1.65
CHMP4A-209ENST00000542700 E9PLD3 99 aa4.75□□□□□ -1.65
CHMP4A-209ENST00000542700 TSTD3H0UI37 97 aa4.75□□□□□ -1.65
CHMP4A-209ENST00000542700 COX7A2LO14548 114 aa4.75□□□□□ -1.65
CHMP4A-209ENST00000542700 APOMO95445 188 aa4.75□□□□□ -1.65
CHMP4A-209ENST00000542700 PRSS2P07478 247 aa4.75□□□□□ -1.65
CHMP4A-209ENST00000542700 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 A0A087WZ39 114 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 J3QQQ9 107 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 COX8AP10176 69 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 FOXI1Q12951 378 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 C6orf226Q5I0X4 101 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 SLC25A34Q6PIV7 304 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 PRR26Q8N8Z3 221 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 COX7B2Q8TF08 81 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 MIEN1Q9BRT3 115 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 UQCR10Q9UDW1 63 aa4.74□□□□□ -1.65
CHMP4A-209ENST00000542700 MYMXA0A1B0GTQ4 84 aa4.73□□□□□ -1.65
CHMP4A-209ENST00000542700 ZNF815PA8K554 130 aa4.73□□□□□ -1.65
CHMP4A-209ENST00000542700 SMIM1B2RUZ4 78 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms