RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 UBE2D4Q9Y2X8 147 aa2.91□□□□□ -1.94
MDM2-228ENST00000542502 IGKV2D-24A0A075B6R9 120 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.9□□□□□ -1.95
MDM2-228ENST00000542502 IGKV2-29A2NJV5 120 aaPredicted RBP2.9□□□□□ -1.95
MDM2-228ENST00000542502 HSBP1O75506 76 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 APOMO95445 188 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 HBDP02042 147 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 TRGC2P03986 189 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 TEX43Q6ZNM6 134 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 C18orf32Q8TCD1 76 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 TOMM6Q96B49 74 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 PACRGQ96M98 296 aaPredicted RBP2.9□□□□□ -1.95
MDM2-228ENST00000542502 SCGB3A1Q96QR1 104 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 PRO0461Q9UI25 63 aa2.9□□□□□ -1.95
MDM2-228ENST00000542502 PLECQ15149 4684 aaKnown RBP2.9□□□□□ -1.95
MDM2-228ENST00000542502 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.89□□□□□ -1.95
MDM2-228ENST00000542502 IGIPA6NJ69 53 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 KRTAP10-1P60331 282 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 HERVK_113P63121 156 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 LINC01620Q4KN68 170 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 ENHOQ6UWT2 76 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 LINC01561Q8N1V8 128 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 DHRS4-AS1Q9P1J3 65 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 HSPB8Q9UJY1 196 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 DNAH6Q9C0G6 4158 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 VPS13DQ5THJ4 4388 aa2.89□□□□□ -1.95
MDM2-228ENST00000542502 KMT2AQ03164 3969 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 DNAH1Q9P2D7 4330 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 IGLV4-60A0A075B6I1 120 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 A0A087WTM6 91 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 IGHV1-58A0A0C4DH39 117 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 LINC00959A0A1B0GUT2 108 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 H3BRM9 83 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 COX7A2LO14548 114 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 RPL39P62891 51 aaKnown RBP2.88□□□□□ -1.95
MDM2-228ENST00000542502 PMVKQ15126 192 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 SFTA2Q6UW10 78 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 Q6ZRN7 208 aaPredicted RBP2.88□□□□□ -1.95
MDM2-228ENST00000542502 FAM19A3Q7Z5A8 133 aa2.88□□□□□ -1.95
MDM2-228ENST00000542502 CHCHD10Q8WYQ3 142 aaPredicted RBP2.88□□□□□ -1.95
MDM2-228ENST00000542502 GEMIN7Q9H840 131 aaKnown RBP2.88□□□□□ -1.95
MDM2-228ENST00000542502 KMT2CQ8NEZ4 4911 aaKnown RBP2.88□□□□□ -1.95
MDM2-228ENST00000542502 TRAV13-1A0A0B4J241 112 aa2.87□□□□□ -1.95
MDM2-228ENST00000542502 TRAV12-1A0A0B4J245 112 aa2.87□□□□□ -1.95
MDM2-228ENST00000542502 TINCRA0A1B0GVN0 87 aa2.87□□□□□ -1.95
MDM2-228ENST00000542502 LEPROTL1O95214 131 aa2.87□□□□□ -1.95
MDM2-228ENST00000542502 S100A6P06703 90 aa2.87□□□□□ -1.95
MDM2-228ENST00000542502 COA6Q5JTJ3 125 aaKnown RBP2.87□□□□□ -1.95
MDM2-228ENST00000542502 Q6ZUT4 128 aa2.87□□□□□ -1.95
MDM2-228ENST00000542502 OR10D4PQ8NGN7 298 aa2.87□□□□□ -1.95
MDM2-228ENST00000542502 AMELXQ99217 191 aa2.87□□□□□ -1.95
MDM2-228ENST00000542502 IGLV10-54A0A075B6I4 117 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 GVQW2A0A096LPI5 108 aaPredicted RBP2.86□□□□□ -1.95
MDM2-228ENST00000542502 IGHV3OR16-9A0A0B4J2B5 98 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 IGKV3OR2-268A0A0C4DH90 116 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 LRCOL1A6NCL2 159 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BKO60814 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BJP06899 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BOP23527 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 PLNP26678 52 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BBP33778 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 CXCL5P42830 114 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 XCL1P47992 114 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 UBE2D1P51668 147 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BDP58876 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 CNBPP62633 177 aaKnown RBP2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BCP62807 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST2H2BEQ16778 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 PDZD11Q5EBL8 140 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.86□□□□□ -1.95
MDM2-228ENST00000542502 CLPSL2Q6UWE3 100 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 Q8N814 137 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BHQ93079 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 IFI27L1Q96BM0 104 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BNQ99877 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 HIST1H2BMQ99879 126 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 MAP1LC3CQ9BXW4 147 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 CST9LQ9H4G1 147 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 LINC00474Q9P2X8 69 aa2.86□□□□□ -1.95
MDM2-228ENST00000542502 C20orf202A1L168 122 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 LINC00587B1AMM8 73 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 SCO1O75880 301 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 SERF1AO75920 110 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 S100A2P29034 98 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 NDUFA6P56556 154 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 HIGD2BQ4VC39 106 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 KRTAP26-1Q6PEX3 210 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 SPATA12Q7Z6I5 190 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 DEFB104AQ8WTQ1 72 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 BAALCQ8WXS3 180 aa2.85□□□□□ -1.95
MDM2-228ENST00000542502 IGLV4-69A0A075B6H9 119 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 IGHV3-64A0A075B6Q5 118 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 C16orf90A8MZG2 172 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 F8VRH5 84 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 NDUFA1O15239 70 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 IGLC3P0DOY3 106 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 CKS1BP61024 79 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 MAJINQ3KP22 176 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 C6orf226Q5I0X4 101 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 LINC00469Q8N7U9 141 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms