RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 UBE2AP49459 152 aa7.17□□□□□ -1.26
SNHG1-216ENST00000541416 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
SNHG1-216ENST00000541416 PAPPA-AS1Q5QFB9 102 aa7.17□□□□□ -1.26
SNHG1-216ENST00000541416 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
SNHG1-216ENST00000541416 IGKV2D-26A0A0A0MRZ7 120 aa7.16□□□□□ -1.26
SNHG1-216ENST00000541416 HERVK_113P63121 156 aa7.16□□□□□ -1.26
SNHG1-216ENST00000541416 LINC00173Q6ZV60 143 aa7.16□□□□□ -1.26
SNHG1-216ENST00000541416 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
SNHG1-216ENST00000541416 MAP1LC3AQ9H492 121 aa7.16□□□□□ -1.26
SNHG1-216ENST00000541416 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
SNHG1-216ENST00000541416 IGLV7-46A0A075B6I9 117 aa7.15□□□□□ -1.26
SNHG1-216ENST00000541416 A0A1B0GXF2 115 aa7.15□□□□□ -1.26
SNHG1-216ENST00000541416 RPL37AP8A6NKH3 93 aa7.15□□□□□ -1.26
SNHG1-216ENST00000541416 ATP5L2Q7Z4Y8 100 aa7.15□□□□□ -1.26
SNHG1-216ENST00000541416 AMELXQ99217 191 aa7.15□□□□□ -1.26
SNHG1-216ENST00000541416 GEMIN7Q9H840 131 aaKnown RBP7.15□□□□□ -1.26
SNHG1-216ENST00000541416 LOC389332A0A1B0GUA5 103 aa7.14□□□□□ -1.27
SNHG1-216ENST00000541416 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
SNHG1-216ENST00000541416 K7EMI3 77 aa7.14□□□□□ -1.27
SNHG1-216ENST00000541416 G0S2P27469 103 aa7.14□□□□□ -1.27
SNHG1-216ENST00000541416 ORMDL2Q53FV1 153 aa7.14□□□□□ -1.27
SNHG1-216ENST00000541416 C2orf66Q6UXQ4 117 aa7.14□□□□□ -1.27
SNHG1-216ENST00000541416 NKAPP1Q8N9T2 125 aa7.14□□□□□ -1.27
SNHG1-216ENST00000541416 LINC00167Q96N53 147 aa7.14□□□□□ -1.27
SNHG1-216ENST00000541416 FAM19A3Q7Z5A8 133 aa7.13□□□□□ -1.27
SNHG1-216ENST00000541416 AKAP14Q86UN6 197 aa7.13□□□□□ -1.27
SNHG1-216ENST00000541416 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
SNHG1-216ENST00000541416 PEA15Q15121 130 aa7.12□□□□□ -1.27
SNHG1-216ENST00000541416 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
SNHG1-216ENST00000541416 Q8N8P6 123 aa7.12□□□□□ -1.27
SNHG1-216ENST00000541416 CDKN2A-AS1Q9UH64 79 aa7.12□□□□□ -1.27
SNHG1-216ENST00000541416 GAGE10A6NGK3 116 aa7.11□□□□□ -1.27
SNHG1-216ENST00000541416 ZC2HC1BQ5TFG8 222 aa7.11□□□□□ -1.27
SNHG1-216ENST00000541416 IGIPA6NJ69 53 aa7.1□□□□□ -1.27
SNHG1-216ENST00000541416 PNRC1Q12796 327 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-216ENST00000541416 IGLV5-37A0A075B6J1 123 aa7.09□□□□□ -1.27
SNHG1-216ENST00000541416 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.27
SNHG1-216ENST00000541416 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
SNHG1-216ENST00000541416 NXT2Q9NPJ8 142 aaKnown RBP7.09□□□□□ -1.27
SNHG1-216ENST00000541416 PDZD11Q5EBL8 140 aa7.08□□□□□ -1.28
SNHG1-216ENST00000541416 SPAG11AQ6PDA7 123 aa7.08□□□□□ -1.28
SNHG1-216ENST00000541416 COX7B2Q8TF08 81 aa7.08□□□□□ -1.28
SNHG1-216ENST00000541416 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
SNHG1-216ENST00000541416 LINC01547P58512 204 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-216ENST00000541416 LINC00337Q8N6G1 96 aa7.07□□□□□ -1.28
SNHG1-216ENST00000541416 IGKV2-28A0A075B6P5 120 aa7.06□□□□□ -1.28
SNHG1-216ENST00000541416 SMIM1B2RUZ4 78 aa7.06□□□□□ -1.28
SNHG1-216ENST00000541416 C9JQL5 133 aa7.06□□□□□ -1.28
SNHG1-216ENST00000541416 IGKV2D-28P01615 120 aa7.06□□□□□ -1.28
SNHG1-216ENST00000541416 RAB5BP61020 215 aa7.06□□□□□ -1.28
SNHG1-216ENST00000541416 C4orf48Q5BLP8 95 aa7.06□□□□□ -1.28
SNHG1-216ENST00000541416 FP248Q71RG6 208 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-216ENST00000541416 FAM19A1Q7Z5A9 133 aa7.06□□□□□ -1.28
SNHG1-216ENST00000541416 ATP5LO75964 103 aa7.05□□□□□ -1.28
SNHG1-216ENST00000541416 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-216ENST00000541416 GNB1LQ9BYB4 327 aa7.05□□□□□ -1.28
SNHG1-216ENST00000541416 TINCRA0A1B0GVN0 87 aa7.04□□□□□ -1.28
SNHG1-216ENST00000541416 LINC01549A6NIU2 74 aa7.04□□□□□ -1.28
SNHG1-216ENST00000541416 PRLHP81277 87 aa7.04□□□□□ -1.28
SNHG1-216ENST00000541416 ERASQ7Z444 233 aa7.04□□□□□ -1.28
SNHG1-216ENST00000541416 TOMM6Q96B49 74 aa7.04□□□□□ -1.28
SNHG1-216ENST00000541416 SCGB3A1Q96QR1 104 aa7.04□□□□□ -1.28
SNHG1-216ENST00000541416 RPL24P83731 157 aaKnown RBP7.03□□□□□ -1.28
SNHG1-216ENST00000541416 CBLN2Q8IUK8 224 aa7.03□□□□□ -1.28
SNHG1-216ENST00000541416 TMEM126AQ9H061 195 aa7.03□□□□□ -1.28
SNHG1-216ENST00000541416 H3BRM9 83 aa7.02□□□□□ -1.29
SNHG1-216ENST00000541416 SRSF3P84103 164 aaKnown RBP7.02□□□□□ -1.29
SNHG1-216ENST00000541416 MRPL18Q9H0U6 180 aaKnown RBP7.02□□□□□ -1.29
SNHG1-216ENST00000541416 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
SNHG1-216ENST00000541416 MT-ND4LP03901 98 aa7.01□□□□□ -1.29
SNHG1-216ENST00000541416 PLEKHB2Q96CS7 222 aa7.01□□□□□ -1.29
SNHG1-216ENST00000541416 ANAPC16Q96DE5 110 aa7.01□□□□□ -1.29
SNHG1-216ENST00000541416 hCG_2014768A0A024R1R8 64 aa7□□□□□ -1.29
SNHG1-216ENST00000541416 SPINK8P0C7L1 97 aa7□□□□□ -1.29
SNHG1-216ENST00000541416 PFN2P35080 140 aa7□□□□□ -1.29
SNHG1-216ENST00000541416 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
SNHG1-216ENST00000541416 ASB16-AS1Q495Z4 193 aa7□□□□□ -1.29
SNHG1-216ENST00000541416 HIGD2AQ9BW72 106 aa7□□□□□ -1.29
SNHG1-216ENST00000541416 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
SNHG1-216ENST00000541416 TMEM238C9JI98 176 aa6.99□□□□□ -1.29
SNHG1-216ENST00000541416 SCO1O75880 301 aa6.99□□□□□ -1.29
SNHG1-216ENST00000541416 COX17Q14061 63 aa6.99□□□□□ -1.29
SNHG1-216ENST00000541416 C3orf22Q8N5N4 141 aa6.99□□□□□ -1.29
SNHG1-216ENST00000541416 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
SNHG1-216ENST00000541416 VPREB1P12018 145 aa6.98□□□□□ -1.29
SNHG1-216ENST00000541416 CST9LQ9H4G1 147 aa6.98□□□□□ -1.29
SNHG1-216ENST00000541416 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
SNHG1-216ENST00000541416 A0A1B0GVG6 124 aa6.97□□□□□ -1.29
SNHG1-216ENST00000541416 M0R378 163 aa6.97□□□□□ -1.29
SNHG1-216ENST00000541416 PMVKQ15126 192 aa6.97□□□□□ -1.29
SNHG1-216ENST00000541416 SFTA2Q6UW10 78 aa6.97□□□□□ -1.29
SNHG1-216ENST00000541416 SND1-IT1Q9HBX3 110 aa6.97□□□□□ -1.29
SNHG1-216ENST00000541416 SPINK1P00995 79 aa6.96□□□□□ -1.3
SNHG1-216ENST00000541416 RAB14P61106 215 aa6.96□□□□□ -1.3
SNHG1-216ENST00000541416 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.3
SNHG1-216ENST00000541416 ERG28Q9UKR5 140 aa6.96□□□□□ -1.3
SNHG1-216ENST00000541416 ADCYAP1P18509 176 aa6.95□□□□□ -1.3
SNHG1-216ENST00000541416 SPRR4Q96PI1 79 aa6.95□□□□□ -1.3
SNHG1-216ENST00000541416 FAM19A2Q8N3H0 131 aa6.94□□□□□ -1.3
SNHG1-216ENST00000541416 DAND5Q8N907 189 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms