RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
DDX55-208ENST00000541259 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
DDX55-208ENST00000541259 hDV102S1A0JD36 115 aa6.12□□□□□ -1.43
DDX55-208ENST00000541259 KIAA0087Q14695 138 aa6.12□□□□□ -1.43
DDX55-208ENST00000541259 PYY3Q5JQD4 70 aa6.12□□□□□ -1.43
DDX55-208ENST00000541259 APOMO95445 188 aa6.11□□□□□ -1.43
DDX55-208ENST00000541259 FUSP35637 526 aaKnown RBP eCLIP6.11□□□□□ -1.43
DDX55-208ENST00000541259 CFAP161Q6P656 301 aa6.11□□□□□ -1.43
DDX55-208ENST00000541259 TOMM7Q9P0U1 55 aa6.11□□□□□ -1.43
DDX55-208ENST00000541259 DNAH8Q96JB1 4490 aa6.11□□□□□ -1.43
DDX55-208ENST00000541259 GVQW2A0A096LPI5 108 aaPredicted RBP6.1□□□□□ -1.43
DDX55-208ENST00000541259 IGKV2D-26A0A0A0MRZ7 120 aa6.1□□□□□ -1.43
DDX55-208ENST00000541259 SLPIP03973 132 aa6.1□□□□□ -1.43
DDX55-208ENST00000541259 TSPEAR-AS2P59090 65 aa6.1□□□□□ -1.43
DDX55-208ENST00000541259 SPAG11BQ08648 103 aa6.1□□□□□ -1.43
DDX55-208ENST00000541259 C2orf82Q6UX34 121 aa6.1□□□□□ -1.43
DDX55-208ENST00000541259 COX7B2Q8TF08 81 aa6.1□□□□□ -1.43
DDX55-208ENST00000541259 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
DDX55-208ENST00000541259 LEPROTO15243 131 aa6.09□□□□□ -1.43
DDX55-208ENST00000541259 HERVK_113P61574 105 aa6.09□□□□□ -1.43
DDX55-208ENST00000541259 Q8IZM0 81 aa6.09□□□□□ -1.43
DDX55-208ENST00000541259 Q8N814 137 aa6.09□□□□□ -1.43
DDX55-208ENST00000541259 NTN5Q8WTR8 489 aaPredicted RBP6.09□□□□□ -1.43
DDX55-208ENST00000541259 DYNC1H1Q14204 4646 aaKnown RBP6.08□□□□□ -1.44
DDX55-208ENST00000541259 E9PLD3 99 aa6.08□□□□□ -1.44
DDX55-208ENST00000541259 PRSS2P07478 247 aa6.08□□□□□ -1.44
DDX55-208ENST00000541259 C6orf226Q5I0X4 101 aa6.08□□□□□ -1.44
DDX55-208ENST00000541259 C10orf25Q5T742 122 aa6.08□□□□□ -1.44
DDX55-208ENST00000541259 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
DDX55-208ENST00000541259 J3QQQ9 107 aa6.07□□□□□ -1.44
DDX55-208ENST00000541259 C14orf177Q52M58 125 aa6.07□□□□□ -1.44
DDX55-208ENST00000541259 Q6ZRU5 148 aa6.07□□□□□ -1.44
DDX55-208ENST00000541259 LINC00336Q6ZUF6 198 aa6.07□□□□□ -1.44
DDX55-208ENST00000541259 PLEKHB2Q96CS7 222 aa6.07□□□□□ -1.44
DDX55-208ENST00000541259 TTTY13Q9BZ97 58 aa6.07□□□□□ -1.44
DDX55-208ENST00000541259 PKHD1P08F94 4074 aa6.06□□□□□ -1.44
DDX55-208ENST00000541259 NMUP48645 174 aa6.06□□□□□ -1.44
DDX55-208ENST00000541259 KRTAP10-2P60368 255 aa6.06□□□□□ -1.44
DDX55-208ENST00000541259 SYCNQ0VAF6 134 aa6.06□□□□□ -1.44
DDX55-208ENST00000541259 C2orf48Q96LS8 159 aa6.06□□□□□ -1.44
DDX55-208ENST00000541259 CAMK2N2Q96S95 79 aa6.06□□□□□ -1.44
DDX55-208ENST00000541259 PAM16Q9Y3D7 125 aa6.06□□□□□ -1.44
DDX55-208ENST00000541259 HSBP1L1C9JCN9 74 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 NDUFA1O15239 70 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 LGALS3P17931 250 aaKnown RBP6.05□□□□□ -1.44
DDX55-208ENST00000541259 CKS1BP61024 79 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 LINC01620Q4KN68 170 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 SPATA45Q537H7 98 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 C9orf116Q5BN46 136 aaPredicted RBP6.05□□□□□ -1.44
DDX55-208ENST00000541259 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 ZNF625Q96I27 306 aaPredicted RBP6.05□□□□□ -1.44
DDX55-208ENST00000541259 VAMP8Q9BV40 100 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 C6orf48Q9UBA6 75 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 NDUFA12Q9UI09 145 aa6.05□□□□□ -1.44
DDX55-208ENST00000541259 A0A1B0GVY2 172 aa6.04□□□□□ -1.44
DDX55-208ENST00000541259 CNBPP62633 177 aaKnown RBP6.04□□□□□ -1.44
DDX55-208ENST00000541259 CARD19Q96LW7 228 aa6.04□□□□□ -1.44
DDX55-208ENST00000541259 KRTAP4-12Q9BQ66 201 aa6.04□□□□□ -1.44
DDX55-208ENST00000541259 TP73-AS1Q9UF72 201 aa6.04□□□□□ -1.44
DDX55-208ENST00000541259 LRP1BQ9NZR2 4599 aa6.04□□□□□ -1.44
DDX55-208ENST00000541259 CXCL5P42830 114 aa6.03□□□□□ -1.44
DDX55-208ENST00000541259 IGLV5-52A0A0A0MRZ9 124 aa6.02□□□□□ -1.45
DDX55-208ENST00000541259 MYMXA0A1B0GTQ4 84 aa6.02□□□□□ -1.45
DDX55-208ENST00000541259 ZNF815PA8K554 130 aa6.02□□□□□ -1.45
DDX55-208ENST00000541259 F8WDY8 70 aa6.02□□□□□ -1.45
DDX55-208ENST00000541259 SMIM6P0DI80 62 aa6.02□□□□□ -1.45
DDX55-208ENST00000541259 C9orf163Q8N9P6 203 aa6.02□□□□□ -1.45
DDX55-208ENST00000541259 C14orf144Q96I85 54 aa6.02□□□□□ -1.45
DDX55-208ENST00000541259 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
DDX55-208ENST00000541259 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.01□□□□□ -1.45
DDX55-208ENST00000541259 A0A0J9YXY3 114 aa6.01□□□□□ -1.45
DDX55-208ENST00000541259 TRBV30A0A0K0K1B3 111 aa6.01□□□□□ -1.45
DDX55-208ENST00000541259 A0A0U1RRA0 63 aa6.01□□□□□ -1.45
DDX55-208ENST00000541259 PFN2P35080 140 aa6.01□□□□□ -1.45
DDX55-208ENST00000541259 SMIM13P0DJ93 91 aa6□□□□□ -1.45
DDX55-208ENST00000541259 COX8AP10176 69 aa6□□□□□ -1.45
DDX55-208ENST00000541259 HERV-K104P63124 156 aa6□□□□□ -1.45
DDX55-208ENST00000541259 S100A12P80511 92 aa6□□□□□ -1.45
DDX55-208ENST00000541259 BOD1L2Q8IYS8 172 aa6□□□□□ -1.45
DDX55-208ENST00000541259 C12orf57Q99622 126 aa6□□□□□ -1.45
DDX55-208ENST00000541259 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
DDX55-208ENST00000541259 ERG28Q9UKR5 140 aa6□□□□□ -1.45
DDX55-208ENST00000541259 MEIG1Q5JSS6 88 aa5.99□□□□□ -1.45
DDX55-208ENST00000541259 SFTA2Q6UW10 78 aa5.99□□□□□ -1.45
DDX55-208ENST00000541259 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
DDX55-208ENST00000541259 Q6ZRP5 223 aa5.99□□□□□ -1.45
DDX55-208ENST00000541259 LINC00518Q8N0U6 118 aa5.99□□□□□ -1.45
DDX55-208ENST00000541259 PRO1933Q9H354 126 aa5.99□□□□□ -1.45
DDX55-208ENST00000541259 LOC107984640A0A0U1RRK4 108 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 B5MCH6 92 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 NDUFC2-KCTD14E9PQ53 114 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 GCSHP23434 173 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 LINC00158P58513 81 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 KRTAP10-1P60331 282 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 RPL18AQ02543 176 aaKnown RBP5.98□□□□□ -1.45
DDX55-208ENST00000541259 GAGE2BQ13066 116 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 ADAMTSL4-AS1Q5T5F5 129 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 DAND5Q8N907 189 aa5.98□□□□□ -1.45
DDX55-208ENST00000541259 LITAFQ99732 161 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms