RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 A0A087WYN8 130 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 SMIM1B2RUZ4 78 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 APOMO95445 188 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 SPINK8P0C7L1 97 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 SEC11AP67812 179 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 ODF1Q14990 250 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 LINC01561Q8N1V8 128 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 OR10D4PQ8NGN7 298 aa9.04□□□□□ -0.96
LTBR-209ENST00000541102 IGKV2-24A0A0C4DH68 120 aa9.03□□□□□ -0.96
LTBR-209ENST00000541102 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
LTBR-209ENST00000541102 CIRBPQ14011 172 aaKnown RBP9.03□□□□□ -0.96
LTBR-209ENST00000541102 C2orf82Q6UX34 121 aa9.03□□□□□ -0.96
LTBR-209ENST00000541102 UNQ6190/PRO20217Q6UXQ8 127 aa9.03□□□□□ -0.96
LTBR-209ENST00000541102 SPACA4Q8TDM5 124 aa9.03□□□□□ -0.96
LTBR-209ENST00000541102 CARD19Q96LW7 228 aa9.03□□□□□ -0.96
LTBR-209ENST00000541102 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
LTBR-209ENST00000541102 HSPB8Q9UJY1 196 aa9.03□□□□□ -0.96
LTBR-209ENST00000541102 MAJINQ3KP22 176 aa9.02□□□□□ -0.97
LTBR-209ENST00000541102 C2orf48Q96LS8 159 aa9.02□□□□□ -0.97
LTBR-209ENST00000541102 TOMM7Q9P0U1 55 aa9.02□□□□□ -0.97
LTBR-209ENST00000541102 F8VRH5 84 aa9.01□□□□□ -0.97
LTBR-209ENST00000541102 CAMK2N2Q96S95 79 aa9.01□□□□□ -0.97
LTBR-209ENST00000541102 HERC1Q15751 4861 aa9□□□□□ -0.97
LTBR-209ENST00000541102 PACRGQ96M98 296 aaPredicted RBP9□□□□□ -0.97
LTBR-209ENST00000541102 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
LTBR-209ENST00000541102 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
LTBR-209ENST00000541102 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
LTBR-209ENST00000541102 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
LTBR-209ENST00000541102 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
LTBR-209ENST00000541102 A0A096LNI7 61 aa8.98□□□□□ -0.97
LTBR-209ENST00000541102 SYS1-DBNDD2H3BUS1 97 aa8.98□□□□□ -0.97
LTBR-209ENST00000541102 HNRNPA3P51991 378 aaKnown RBP8.98□□□□□ -0.97
LTBR-209ENST00000541102 C9orf116Q5BN46 136 aaPredicted RBP8.98□□□□□ -0.97
LTBR-209ENST00000541102 Q8IZM0 81 aa8.98□□□□□ -0.97
LTBR-209ENST00000541102 HIST3H2BBQ8N257 126 aa8.98□□□□□ -0.97
LTBR-209ENST00000541102 STPG4Q8N801 248 aa8.98□□□□□ -0.97
LTBR-209ENST00000541102 COX7B2Q8TF08 81 aa8.98□□□□□ -0.97
LTBR-209ENST00000541102 MAP1LC3CQ9BXW4 147 aa8.98□□□□□ -0.97
LTBR-209ENST00000541102 TMEM223A0PJW6 202 aa8.97□□□□□ -0.97
LTBR-209ENST00000541102 H3BRM9 83 aa8.97□□□□□ -0.97
LTBR-209ENST00000541102 NDUFA1O15239 70 aa8.97□□□□□ -0.97
LTBR-209ENST00000541102 C3orf79P0CE67 100 aa8.97□□□□□ -0.97
LTBR-209ENST00000541102 C6orf226Q5I0X4 101 aa8.97□□□□□ -0.97
LTBR-209ENST00000541102 PRSS2P07478 247 aa8.96□□□□□ -0.98
LTBR-209ENST00000541102 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
LTBR-209ENST00000541102 KRTDAPP60985 99 aa8.95□□□□□ -0.98
LTBR-209ENST00000541102 SNRPEP62304 92 aaKnown RBP8.95□□□□□ -0.98
LTBR-209ENST00000541102 GAGE2BQ13066 116 aa8.95□□□□□ -0.98
LTBR-209ENST00000541102 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
LTBR-209ENST00000541102 HIST1H2BLQ99880 126 aa8.95□□□□□ -0.98
LTBR-209ENST00000541102 F8WDY8 70 aa8.94□□□□□ -0.98
LTBR-209ENST00000541102 DPM2O94777 84 aa8.94□□□□□ -0.98
LTBR-209ENST00000541102 LINC01545Q5VT33 79 aa8.94□□□□□ -0.98
LTBR-209ENST00000541102 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
LTBR-209ENST00000541102 LOC107984640A0A0U1RRK4 108 aa8.93□□□□□ -0.98
LTBR-209ENST00000541102 OXTP01178 125 aa8.93□□□□□ -0.98
LTBR-209ENST00000541102 CKS1BP61024 79 aa8.93□□□□□ -0.98
LTBR-209ENST00000541102 RNF151Q2KHN1 245 aa8.93□□□□□ -0.98
LTBR-209ENST00000541102 C5orf52A6NGY3 159 aa8.92□□□□□ -0.98
LTBR-209ENST00000541102 IGKCP01834 107 aa8.92□□□□□ -0.98
LTBR-209ENST00000541102 S100A6P06703 90 aa8.92□□□□□ -0.98
LTBR-209ENST00000541102 PLNP26678 52 aa8.92□□□□□ -0.98
LTBR-209ENST00000541102 PTTG1IPP53801 180 aa8.92□□□□□ -0.98
LTBR-209ENST00000541102 TSPEAR-AS2P59090 65 aa8.92□□□□□ -0.98
LTBR-209ENST00000541102 RPL18AQ02543 176 aaKnown RBP8.92□□□□□ -0.98
LTBR-209ENST00000541102 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
LTBR-209ENST00000541102 Q6ZRP5 223 aa8.92□□□□□ -0.98
LTBR-209ENST00000541102 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
LTBR-209ENST00000541102 TRBV30A0A0K0K1B3 111 aa8.91□□□□□ -0.98
LTBR-209ENST00000541102 LRP1Q07954 4544 aaKnown RBP8.91□□□□□ -0.98
LTBR-209ENST00000541102 ZNF625Q96I27 306 aaPredicted RBP8.9□□□□□ -0.98
LTBR-209ENST00000541102 TLX1NBP0CAT3 122 aa8.89□□□□□ -0.99
LTBR-209ENST00000541102 S100A2P29034 98 aa8.89□□□□□ -0.99
LTBR-209ENST00000541102 CXCL5P42830 114 aa8.89□□□□□ -0.99
LTBR-209ENST00000541102 GAGE2EQ4V326 116 aa8.89□□□□□ -0.99
LTBR-209ENST00000541102 GAGE2DQ9UEU5 116 aa8.89□□□□□ -0.99
LTBR-209ENST00000541102 A0A1W2PNN7 141 aa8.88□□□□□ -0.99
LTBR-209ENST00000541102 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
LTBR-209ENST00000541102 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
LTBR-209ENST00000541102 NDUFC2-KCTD14E9PQ53 114 aa8.87□□□□□ -0.99
LTBR-209ENST00000541102 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
LTBR-209ENST00000541102 KRTAP7-1Q8IUC3 87 aa8.87□□□□□ -0.99
LTBR-209ENST00000541102 ATOH7Q8N100 152 aa8.87□□□□□ -0.99
LTBR-209ENST00000541102 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
LTBR-209ENST00000541102 LEPROTO15243 131 aa8.86□□□□□ -0.99
LTBR-209ENST00000541102 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
LTBR-209ENST00000541102 XAGE1AQ9HD64 81 aa8.85□□□□□ -0.99
LTBR-209ENST00000541102 IGKV2D-26A0A0A0MRZ7 120 aa8.84□□□□□ -0.99
LTBR-209ENST00000541102 PFN2P35080 140 aa8.84□□□□□ -0.99
LTBR-209ENST00000541102 E9PLD3 99 aa8.83□□□□□ -1
LTBR-209ENST00000541102 J3QQQ9 107 aa8.83□□□□□ -1
LTBR-209ENST00000541102 PLEKHB2Q96CS7 222 aa8.83□□□□□ -1
LTBR-209ENST00000541102 NDUFA12Q9UI09 145 aa8.83□□□□□ -1
LTBR-209ENST00000541102 ERG28Q9UKR5 140 aa8.83□□□□□ -1
LTBR-209ENST00000541102 A0A0U1RRA0 63 aa8.82□□□□□ -1
LTBR-209ENST00000541102 HERVK_113P61574 105 aa8.82□□□□□ -1
LTBR-209ENST00000541102 ANKRD39Q53RE8 183 aa8.82□□□□□ -1
LTBR-209ENST00000541102 TTTY13Q9BZ97 58 aa8.82□□□□□ -1
LTBR-209ENST00000541102 C20orf202A1L168 122 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms