RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 C9orf163Q8N9P6 203 aa4.03□□□□□ -1.76
TTR-203ENST00000541025 LINC00526Q96FQ7 95 aa4.03□□□□□ -1.76
TTR-203ENST00000541025 TIMM21Q9BVV7 248 aa4.03□□□□□ -1.76
TTR-203ENST00000541025 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
TTR-203ENST00000541025 MAP1LC3AQ9H492 121 aa4.03□□□□□ -1.76
TTR-203ENST00000541025 TRAV9-1A0A075B6T8 112 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 TRAV13-1A0A0B4J241 112 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 EPM2AB3EWF7 344 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 APOC3P02656 99 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 IFI27P40305 119 aaPredicted RBP4.02□□□□□ -1.77
TTR-203ENST00000541025 CNBPP62633 177 aaKnown RBP4.02□□□□□ -1.77
TTR-203ENST00000541025 SS18Q15532 418 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 Q5VSD8 79 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 Q8N8P6 123 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 Q8NBF4 154 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 LAMTOR2Q9Y2Q5 125 aa4.02□□□□□ -1.77
TTR-203ENST00000541025 GVQW2A0A096LPI5 108 aaPredicted RBP4.01□□□□□ -1.77
TTR-203ENST00000541025 TGIF2-C20orf24A0A0A6YYL0 155 aa4.01□□□□□ -1.77
TTR-203ENST00000541025 RAB5AP20339 215 aa4.01□□□□□ -1.77
TTR-203ENST00000541025 S100PP25815 95 aa4.01□□□□□ -1.77
TTR-203ENST00000541025 SDIM1Q6ZPB5 146 aa4.01□□□□□ -1.77
TTR-203ENST00000541025 CIRBP-AS1Q8TBR5 109 aa4.01□□□□□ -1.77
TTR-203ENST00000541025 CHAC1Q9BUX1 264 aa4.01□□□□□ -1.77
TTR-203ENST00000541025 GNB1LQ9BYB4 327 aa4.01□□□□□ -1.77
TTR-203ENST00000541025 SPANXA1Q9NS26 97 aa4.01□□□□□ -1.77
TTR-203ENST00000541025 IGHV1-58A0A0C4DH39 117 aa4□□□□□ -1.77
TTR-203ENST00000541025 C1orf196B1AJZ1 125 aa4□□□□□ -1.77
TTR-203ENST00000541025 CHTF8P0CG12 524 aa4□□□□□ -1.77
TTR-203ENST00000541025 NDUFV3P56181 108 aaKnown RBP4□□□□□ -1.77
TTR-203ENST00000541025 MRPS36P82909 103 aaKnown RBP4□□□□□ -1.77
TTR-203ENST00000541025 SMAGPQ0VAQ4 97 aa4□□□□□ -1.77
TTR-203ENST00000541025 C2orf66Q6UXQ4 117 aa4□□□□□ -1.77
TTR-203ENST00000541025 LINC00173Q6ZV60 143 aa4□□□□□ -1.77
TTR-203ENST00000541025 SLC7A5P1Q8MH63 180 aa4□□□□□ -1.77
TTR-203ENST00000541025 IGHV3OR16-9A0A0B4J2B5 98 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 IGIPA6NJ69 53 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 COX7A2LO14548 114 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 SNAPINO95295 136 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 FABP9Q0Z7S8 132 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 C5orf38Q86SI9 138 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 SVBPQ8N300 66 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 YPEL4Q96NS1 127 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 NXT2Q9NPJ8 142 aaKnown RBP3.99□□□□□ -1.77
TTR-203ENST00000541025 CYSLTR1Q9Y271 337 aa3.99□□□□□ -1.77
TTR-203ENST00000541025 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 IGLV4-69A0A075B6H9 119 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 IGHV3-64A0A075B6Q5 118 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.98□□□□□ -1.77
TTR-203ENST00000541025 LINC01546A6NGU7 62 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 K7EMI3 77 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 MT-ND6P03923 174 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 UBE2D1P51668 147 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
TTR-203ENST00000541025 COX6A2Q02221 97 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 CIRBPQ14011 172 aaKnown RBP3.98□□□□□ -1.77
TTR-203ENST00000541025 NDUFA5Q16718 116 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 COX19Q49B96 90 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 SPACA4Q8TDM5 124 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 TMEM141Q96I45 108 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 AMELXQ99217 191 aa3.98□□□□□ -1.77
TTR-203ENST00000541025 A0A096LNI7 61 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 A0A096LNJ9 63 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 TEX43Q6ZNM6 134 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 Q6ZRU5 148 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 CBLN2Q8IUK8 224 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 C18orf32Q8TCD1 76 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 TOMM6Q96B49 74 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 CARD19Q96LW7 228 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 TRAPPC1Q9Y5R8 145 aa3.97□□□□□ -1.77
TTR-203ENST00000541025 IGKV2-24A0A0C4DH68 120 aa3.96□□□□□ -1.78
TTR-203ENST00000541025 INAFM2P0DMQ5 153 aa3.96□□□□□ -1.78
TTR-203ENST00000541025 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
TTR-203ENST00000541025 SYCNQ0VAF6 134 aa3.96□□□□□ -1.78
TTR-203ENST00000541025 ERASQ7Z444 233 aa3.96□□□□□ -1.78
TTR-203ENST00000541025 ORAOV1Q8WV07 137 aa3.96□□□□□ -1.78
TTR-203ENST00000541025 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
TTR-203ENST00000541025 VCX2Q9H322 139 aa3.96□□□□□ -1.78
TTR-203ENST00000541025 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
TTR-203ENST00000541025 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 A0A0J9YXV3 536 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 KIAA0087Q14695 138 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 PMCHL1Q16048 86 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 MAJINQ3KP22 176 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 Q6ZN92 141 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 FA2HQ7L5A8 372 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 OR10D4PQ8NGN7 298 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 SCGB3A1Q96QR1 104 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 CAMK2N2Q96S95 79 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 C2orf88Q9BSF0 95 aa3.95□□□□□ -1.78
TTR-203ENST00000541025 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.94□□□□□ -1.78
TTR-203ENST00000541025 APOMO95445 188 aa3.94□□□□□ -1.78
TTR-203ENST00000541025 HNRNPA3P51991 378 aaKnown RBP3.94□□□□□ -1.78
TTR-203ENST00000541025 C2orf82Q6UX34 121 aa3.94□□□□□ -1.78
TTR-203ENST00000541025 UNQ6190/PRO20217Q6UXQ8 127 aa3.94□□□□□ -1.78
TTR-203ENST00000541025 FAM19A3Q7Z5A8 133 aa3.94□□□□□ -1.78
TTR-203ENST00000541025 Q8N377 158 aa3.94□□□□□ -1.78
TTR-203ENST00000541025 SMCO4Q9NRQ5 59 aa3.94□□□□□ -1.78
TTR-203ENST00000541025 PLAC8Q9NZF1 115 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms