RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 LINC00469Q8N7U9 141 aa8.2□□□□□ -1.1
LTBR-208ENST00000541005 PACRGQ96M98 296 aaPredicted RBP8.2□□□□□ -1.1
LTBR-208ENST00000541005 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
LTBR-208ENST00000541005 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
LTBR-208ENST00000541005 ATP5LO75964 103 aa8.19□□□□□ -1.1
LTBR-208ENST00000541005 IGLC3P0DOY3 106 aa8.19□□□□□ -1.1
LTBR-208ENST00000541005 PRR3P79522 188 aaKnown RBP8.19□□□□□ -1.1
LTBR-208ENST00000541005 Q6ZRP5 223 aa8.19□□□□□ -1.1
LTBR-208ENST00000541005 CHCHD1Q96BP2 118 aaKnown RBP8.19□□□□□ -1.1
LTBR-208ENST00000541005 CXCL5P42830 114 aa8.18□□□□□ -1.1
LTBR-208ENST00000541005 PMCHL1Q16048 86 aa8.18□□□□□ -1.1
LTBR-208ENST00000541005 C9orf116Q5BN46 136 aaPredicted RBP8.18□□□□□ -1.1
LTBR-208ENST00000541005 TOMM7Q9P0U1 55 aa8.18□□□□□ -1.1
LTBR-208ENST00000541005 NDUFC2-KCTD14E9PQ53 114 aa8.17□□□□□ -1.1
LTBR-208ENST00000541005 CKS1BP61024 79 aa8.17□□□□□ -1.1
LTBR-208ENST00000541005 C6orf226Q5I0X4 101 aa8.17□□□□□ -1.1
LTBR-208ENST00000541005 F8VRH5 84 aa8.16□□□□□ -1.1
LTBR-208ENST00000541005 OXTP01178 125 aa8.16□□□□□ -1.1
LTBR-208ENST00000541005 H3BRM9 83 aa8.15□□□□□ -1.1
LTBR-208ENST00000541005 TRGC2P03986 189 aa8.15□□□□□ -1.1
LTBR-208ENST00000541005 COX7B2Q8TF08 81 aa8.15□□□□□ -1.1
LTBR-208ENST00000541005 COLCA2A8K830 154 aa8.14□□□□□ -1.11
LTBR-208ENST00000541005 SPINK8P0C7L1 97 aa8.14□□□□□ -1.11
LTBR-208ENST00000541005 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
LTBR-208ENST00000541005 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
LTBR-208ENST00000541005 IGLV5-39A0A0G2JS06 123 aa8.13□□□□□ -1.11
LTBR-208ENST00000541005 J3QL48 77 aa8.13□□□□□ -1.11
LTBR-208ENST00000541005 ZNF22P17026 224 aaPredicted RBP8.13□□□□□ -1.11
LTBR-208ENST00000541005 NDUFA6P56556 154 aa8.13□□□□□ -1.11
LTBR-208ENST00000541005 TRAV12-1A0A0B4J245 112 aa8.12□□□□□ -1.11
LTBR-208ENST00000541005 FAM168BA1KXE4 195 aa8.12□□□□□ -1.11
LTBR-208ENST00000541005 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
LTBR-208ENST00000541005 ODF1Q14990 250 aa8.12□□□□□ -1.11
LTBR-208ENST00000541005 C9orf129Q5T035 196 aaKnown RBP8.12□□□□□ -1.11
LTBR-208ENST00000541005 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
LTBR-208ENST00000541005 KRTAP7-1Q8IUC3 87 aa8.12□□□□□ -1.11
LTBR-208ENST00000541005 IFI27L1Q96BM0 104 aa8.12□□□□□ -1.11
LTBR-208ENST00000541005 LRP1Q07954 4544 aaKnown RBP8.11□□□□□ -1.11
LTBR-208ENST00000541005 HSBP1O75506 76 aa8.11□□□□□ -1.11
LTBR-208ENST00000541005 LINC00310P59036 64 aa8.11□□□□□ -1.11
LTBR-208ENST00000541005 PHF5AQ7RTV0 110 aaKnown RBP8.11□□□□□ -1.11
LTBR-208ENST00000541005 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
LTBR-208ENST00000541005 SERF1AO75920 110 aa8.09□□□□□ -1.11
LTBR-208ENST00000541005 PSORS1C2Q9UIG4 136 aa8.09□□□□□ -1.11
LTBR-208ENST00000541005 CHTOPQ9Y3Y2 248 aaKnown RBP8.09□□□□□ -1.11
LTBR-208ENST00000541005 M0QXV9 152 aa8.08□□□□□ -1.12
LTBR-208ENST00000541005 SRSF9Q13242 221 aaKnown RBP eCLIP8.08□□□□□ -1.12
LTBR-208ENST00000541005 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
LTBR-208ENST00000541005 FAM19A2Q8N3H0 131 aa8.08□□□□□ -1.12
LTBR-208ENST00000541005 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
LTBR-208ENST00000541005 TMEM170BQ5T4T1 132 aa8.07□□□□□ -1.12
LTBR-208ENST00000541005 SFTA2Q6UW10 78 aa8.07□□□□□ -1.12
LTBR-208ENST00000541005 SERTAD4-AS1Q5TG53 156 aa8.06□□□□□ -1.12
LTBR-208ENST00000541005 KRTAP11-1Q8IUC1 163 aa8.06□□□□□ -1.12
LTBR-208ENST00000541005 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
LTBR-208ENST00000541005 TMEM223A0PJW6 202 aa8.05□□□□□ -1.12
LTBR-208ENST00000541005 SCO1O75880 301 aa8.05□□□□□ -1.12
LTBR-208ENST00000541005 LEPROTL1O95214 131 aa8.05□□□□□ -1.12
LTBR-208ENST00000541005 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
LTBR-208ENST00000541005 TP73-AS1Q9UF72 201 aa8.05□□□□□ -1.12
LTBR-208ENST00000541005 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
LTBR-208ENST00000541005 NUPR1O60356 82 aa8.04□□□□□ -1.12
LTBR-208ENST00000541005 ZNF625Q96I27 306 aaPredicted RBP8.04□□□□□ -1.12
LTBR-208ENST00000541005 HERC1Q15751 4861 aa8.04□□□□□ -1.12
LTBR-208ENST00000541005 COX17Q14061 63 aa8.03□□□□□ -1.12
LTBR-208ENST00000541005 C1orf137Q5JT78 98 aa8.03□□□□□ -1.12
LTBR-208ENST00000541005 HSPB8Q9UJY1 196 aa8.03□□□□□ -1.12
LTBR-208ENST00000541005 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
LTBR-208ENST00000541005 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BKO60814 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 IGLV7-43P04211 117 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BJP06899 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BOP23527 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BBP33778 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BDP58876 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BCP62807 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 UBE2BP63146 152 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST2H2BEQ16778 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.02□□□□□ -1.13
LTBR-208ENST00000541005 REG3GQ6UW15 175 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BHQ93079 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 LINC01600Q96MT4 127 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BNQ99877 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 HIST1H2BMQ99879 126 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
LTBR-208ENST00000541005 LBHQ53QV2 105 aaPredicted RBP8.01□□□□□ -1.13
LTBR-208ENST00000541005 MRPL55Q7Z7F7 128 aaKnown RBP8.01□□□□□ -1.13
LTBR-208ENST00000541005 PLNP26678 52 aa7.99□□□□□ -1.13
LTBR-208ENST00000541005 PFN2P35080 140 aa7.99□□□□□ -1.13
LTBR-208ENST00000541005 SND1-IT1Q9HBX3 110 aa7.99□□□□□ -1.13
LTBR-208ENST00000541005 H0Y8G0 127 aa7.98□□□□□ -1.13
LTBR-208ENST00000541005 FABP4P15090 132 aa7.98□□□□□ -1.13
LTBR-208ENST00000541005 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
LTBR-208ENST00000541005 H0Y9J4 135 aa7.96□□□□□ -1.14
LTBR-208ENST00000541005 DPM2O94777 84 aa7.96□□□□□ -1.14
LTBR-208ENST00000541005 VPREB1P12018 145 aa7.96□□□□□ -1.14
LTBR-208ENST00000541005 HERV-K104P63124 156 aa7.96□□□□□ -1.14
LTBR-208ENST00000541005 COA6Q5JTJ3 125 aaKnown RBP7.96□□□□□ -1.14
LTBR-208ENST00000541005 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.14
LTBR-208ENST00000541005 LINC00167Q96N53 147 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms