RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 LINC01561Q8N1V8 128 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 LINC00269Q8N2A0 174 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 Q8N814 137 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 C7orf33Q8WU49 177 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 RMI2Q96E14 147 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 BTF3L4Q96K17 158 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 YPEL4Q96NS1 127 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 TIMM21Q9BVV7 248 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 SMIM2Q9BVW6 85 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 ST20Q9HBF5 79 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 URGCP-MRPS24S4R325 110 aa2.49□□□□□ -2.01
SOX9-AS1-214ENST00000540802 A0A1B0GWB2 263 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 C7orf77A4D0Y5 90 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 C16orf90A8MZG2 172 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 TCAPO15273 167 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 ANGP03950 147 aaKnown RBP2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 FGF6P10767 208 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 REG3AQ06141 175 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 MRPL54Q6P161 138 aaKnown RBP2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 ORMDL3Q8N138 153 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 Q8N9L7 120 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 UBE2WQ96B02 151 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 TMEM101Q96IK0 257 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 GNB1LQ9BYB4 327 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 CDC42SE2Q9NRR3 84 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 UBE2D4Q9Y2X8 147 aa2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 DMBT1Q9UGM3 2413 aaPredicted RBP2.48□□□□□ -2.01
SOX9-AS1-214ENST00000540802 IGKV2D-24A0A075B6R9 120 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 IGKV2-29A2NJV5 120 aaPredicted RBP2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 TMEM262E9PQX1 116 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 K7EMI3 77 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 CCL25O15444 150 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 HLA-DQA1P01909 254 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 CRPP02741 224 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 PMCHP20382 165 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 CKS2P33552 79 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 CNBPP62633 177 aaKnown RBP2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 MRPS36P82909 103 aaKnown RBP2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 CIRBPQ14011 172 aaKnown RBP2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 COX19Q49B96 90 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 FAM19A3Q7Z5A8 133 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 C15orf56Q8N910 161 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 OR5A1Q8NGJ0 315 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 BAALCQ8WXS3 180 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 PRELID3AQ96N28 172 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 TNXBP22105 4242 aa2.47□□□□□ -2.01
SOX9-AS1-214ENST00000540802 GVQW2A0A096LPI5 108 aaPredicted RBP2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 LINC00959A0A1B0GUT2 108 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 UBE2L6O14933 153 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 PSCAO43653 123 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 MT-ND6P03923 174 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 FUSP35637 526 aaKnown RBP eCLIP2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 CLPSL2Q6UWE3 100 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 LINC00173Q6ZV60 143 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 SVBPQ8N300 66 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 ZNF664Q8N3J9 261 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 Q8N8P6 123 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 DEFB104AQ8WTQ1 72 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 CHCHD10Q8WYQ3 142 aaPredicted RBP2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 SPANXA1Q9NS26 97 aa2.46□□□□□ -2.02
SOX9-AS1-214ENST00000540802 IGLV10-54A0A075B6I4 117 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 IGHV3OR16-9A0A0B4J2B5 98 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 IGIPA6NJ69 53 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 LECT2O14960 151 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 APOC3P02656 99 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 FCER1GP30273 86 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 RPL39P62891 51 aaKnown RBP2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 SMAGPQ0VAQ4 97 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 SDIM1Q6ZPB5 146 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 Q6ZUT4 128 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 C9orf163Q8N9P6 203 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 AMELXQ99217 191 aa2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 NXT2Q9NPJ8 142 aaKnown RBP2.45□□□□□ -2.02
SOX9-AS1-214ENST00000540802 A0A096LNJ9 63 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 TGIF2-C20orf24A0A0A6YYL0 155 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 C1orf196B1AJZ1 125 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 S100PP25815 95 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 IFI27P40305 119 aaPredicted RBP2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 ORMDL2Q53FV1 153 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 AMMECR1LQ6DCA0 310 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 RNASEKQ6P5S7 137 aaKnown RBP2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 TOMM6Q96B49 74 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 TIMM17AQ99595 171 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 MAP1LC3AQ9H492 121 aa2.44□□□□□ -2.02
SOX9-AS1-214ENST00000540802 HMCN2Q8NDA2 5059 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 IGHV1-58A0A0C4DH39 117 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 LINC01549A6NIU2 74 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 RAB5AP20339 215 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 UBE2D1P51668 147 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 SS18Q15532 418 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 NDUFA5Q16718 116 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 SCXQ7RTU7 201 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 C18orf32Q8TCD1 76 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 TMEM141Q96I45 108 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 HIST1H4GQ99525 98 aa2.43□□□□□ -2.02
SOX9-AS1-214ENST00000540802 CHAC1Q9BUX1 264 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms