RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 HIST1H2BLQ99880 126 aa10.77□□□□□ -0.69
UBC-208ENST00000540700 MAP1LC3CQ9BXW4 147 aa10.77□□□□□ -0.69
UBC-208ENST00000540700 S100A6P06703 90 aa10.76□□□□□ -0.69
UBC-208ENST00000540700 HMCN2Q8NDA2 5059 aa10.76□□□□□ -0.69
UBC-208ENST00000540700 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
UBC-208ENST00000540700 ZNF561-AS1K7EIQ3 104 aa10.75□□□□□ -0.69
UBC-208ENST00000540700 C10orf25Q5T742 122 aa10.75□□□□□ -0.69
UBC-208ENST00000540700 Q6ZRU5 148 aa10.75□□□□□ -0.69
UBC-208ENST00000540700 GCSHP23434 173 aa10.74□□□□□ -0.69
UBC-208ENST00000540700 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
UBC-208ENST00000540700 C9orf163Q8N9P6 203 aa10.74□□□□□ -0.69
UBC-208ENST00000540700 IGLV5-39A0A0G2JS06 123 aa10.73□□□□□ -0.69
UBC-208ENST00000540700 KRTDAPP60985 99 aa10.73□□□□□ -0.69
UBC-208ENST00000540700 LINC01545Q5VT33 79 aa10.73□□□□□ -0.69
UBC-208ENST00000540700 C2orf82Q6UX34 121 aa10.73□□□□□ -0.69
UBC-208ENST00000540700 C2orf48Q96LS8 159 aa10.73□□□□□ -0.69
UBC-208ENST00000540700 TOMM7Q9P0U1 55 aa10.73□□□□□ -0.69
UBC-208ENST00000540700 TMA7Q9Y2S6 64 aaKnown RBP10.73□□□□□ -0.69
UBC-208ENST00000540700 TMEM223A0PJW6 202 aa10.72□□□□□ -0.69
UBC-208ENST00000540700 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
UBC-208ENST00000540700 FAM30AQ9NZY2 134 aa10.72□□□□□ -0.69
UBC-208ENST00000540700 H3BRM9 83 aa10.71□□□□□ -0.69
UBC-208ENST00000540700 DPM2O94777 84 aa10.71□□□□□ -0.69
UBC-208ENST00000540700 SYCNQ0VAF6 134 aa10.71□□□□□ -0.69
UBC-208ENST00000540700 PET117Q6UWS5 81 aa10.71□□□□□ -0.69
UBC-208ENST00000540700 Q8IZM0 81 aa10.71□□□□□ -0.69
UBC-208ENST00000540700 CARD19Q96LW7 228 aa10.71□□□□□ -0.69
UBC-208ENST00000540700 CAMK2N2Q96S95 79 aa10.71□□□□□ -0.69
UBC-208ENST00000540700 PANO1I0J062 215 aa10.7□□□□□ -0.7
UBC-208ENST00000540700 IGKCP01834 107 aa10.7□□□□□ -0.7
UBC-208ENST00000540700 S100A2P29034 98 aa10.7□□□□□ -0.7
UBC-208ENST00000540700 SDIM1Q6ZPB5 146 aa10.7□□□□□ -0.7
UBC-208ENST00000540700 C6orf48Q9UBA6 75 aa10.7□□□□□ -0.7
UBC-208ENST00000540700 PLNP26678 52 aa10.69□□□□□ -0.7
UBC-208ENST00000540700 COX7B2Q8TF08 81 aa10.69□□□□□ -0.7
UBC-208ENST00000540700 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.67□□□□□ -0.7
UBC-208ENST00000540700 NDUFA1O15239 70 aa10.67□□□□□ -0.7
UBC-208ENST00000540700 C9orf116Q5BN46 136 aaPredicted RBP10.67□□□□□ -0.7
UBC-208ENST00000540700 PRSS2P07478 247 aa10.66□□□□□ -0.7
UBC-208ENST00000540700 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
UBC-208ENST00000540700 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
UBC-208ENST00000540700 Q6ZSA8 131 aa10.66□□□□□ -0.7
UBC-208ENST00000540700 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.66□□□□□ -0.7
UBC-208ENST00000540700 F8WDY8 70 aa10.65□□□□□ -0.7
UBC-208ENST00000540700 CHTF8P0CG12 524 aa10.65□□□□□ -0.7
UBC-208ENST00000540700 A0A096LNI7 61 aa10.63□□□□□ -0.71
UBC-208ENST00000540700 CKS1BP61024 79 aa10.63□□□□□ -0.71
UBC-208ENST00000540700 RNF151Q2KHN1 245 aa10.63□□□□□ -0.71
UBC-208ENST00000540700 ATOH7Q8N100 152 aa10.63□□□□□ -0.71
UBC-208ENST00000540700 STPG4Q8N801 248 aa10.63□□□□□ -0.71
UBC-208ENST00000540700 TRBV30A0A0K0K1B3 111 aa10.62□□□□□ -0.71
UBC-208ENST00000540700 ZNF625Q96I27 306 aaPredicted RBP10.62□□□□□ -0.71
UBC-208ENST00000540700 CXCL5P42830 114 aa10.61□□□□□ -0.71
UBC-208ENST00000540700 Q6ZRP5 223 aa10.61□□□□□ -0.71
UBC-208ENST00000540700 KRTAP29-1A8MX34 341 aaPredicted RBP10.6□□□□□ -0.71
UBC-208ENST00000540700 LEPROTO15243 131 aa10.6□□□□□ -0.71
UBC-208ENST00000540700 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
UBC-208ENST00000540700 CIRBPQ14011 172 aaKnown RBP10.6□□□□□ -0.71
UBC-208ENST00000540700 LRP1Q07954 4544 aaKnown RBP10.59□□□□□ -0.71
UBC-208ENST00000540700 IGKV2D-26A0A0A0MRZ7 120 aa10.59□□□□□ -0.71
UBC-208ENST00000540700 IGKV2-24A0A0C4DH68 120 aa10.59□□□□□ -0.71
UBC-208ENST00000540700 C20orf202A1L168 122 aa10.59□□□□□ -0.71
UBC-208ENST00000540700 E9PLD3 99 aa10.59□□□□□ -0.71
UBC-208ENST00000540700 MAJINQ3KP22 176 aa10.59□□□□□ -0.71
UBC-208ENST00000540700 SERTAD4-AS1Q5TG53 156 aa10.59□□□□□ -0.71
UBC-208ENST00000540700 SPACA4Q8TDM5 124 aa10.59□□□□□ -0.71
UBC-208ENST00000540700 LOC107984640A0A0U1RRK4 108 aa10.58□□□□□ -0.72
UBC-208ENST00000540700 PTTG1IPP53801 180 aa10.58□□□□□ -0.72
UBC-208ENST00000540700 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
UBC-208ENST00000540700 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
UBC-208ENST00000540700 ANKRD39Q53RE8 183 aa10.58□□□□□ -0.72
UBC-208ENST00000540700 J3QQQ9 107 aa10.57□□□□□ -0.72
UBC-208ENST00000540700 PLA2G1BP04054 148 aaKnown RBP10.57□□□□□ -0.72
UBC-208ENST00000540700 HERVK_113P61574 105 aa10.57□□□□□ -0.72
UBC-208ENST00000540700 SCXQ7RTU7 201 aa10.57□□□□□ -0.72
UBC-208ENST00000540700 NDUFC2-KCTD14E9PQ53 114 aa10.56□□□□□ -0.72
UBC-208ENST00000540700 CIRBP-AS1Q8TBR5 109 aa10.56□□□□□ -0.72
UBC-208ENST00000540700 PLEKHB2Q96CS7 222 aa10.56□□□□□ -0.72
UBC-208ENST00000540700 NDUFA12Q9UI09 145 aa10.56□□□□□ -0.72
UBC-208ENST00000540700 GAGE2EQ4V326 116 aa10.55□□□□□ -0.72
UBC-208ENST00000540700 TTTY13Q9BZ97 58 aa10.55□□□□□ -0.72
UBC-208ENST00000540700 GAGE2DQ9UEU5 116 aa10.55□□□□□ -0.72
UBC-208ENST00000540700 C9orf129Q5T035 196 aaKnown RBP10.54□□□□□ -0.72
UBC-208ENST00000540700 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
UBC-208ENST00000540700 PLA2G2DQ9UNK4 145 aa10.54□□□□□ -0.72
UBC-208ENST00000540700 A0A087WYN8 130 aa10.53□□□□□ -0.72
UBC-208ENST00000540700 A0A1W2PNN7 141 aa10.53□□□□□ -0.72
UBC-208ENST00000540700 SCGB1D1O95968 90 aa10.53□□□□□ -0.72
UBC-208ENST00000540700 KRTAP7-1Q8IUC3 87 aa10.53□□□□□ -0.72
UBC-208ENST00000540700 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
UBC-208ENST00000540700 FAM168BA1KXE4 195 aa10.52□□□□□ -0.73
UBC-208ENST00000540700 PFN2P35080 140 aa10.52□□□□□ -0.73
UBC-208ENST00000540700 LGALS3P17931 250 aaKnown RBP10.51□□□□□ -0.73
UBC-208ENST00000540700 XAGE1AQ9HD64 81 aa10.51□□□□□ -0.73
UBC-208ENST00000540700 PLAC8Q9NZF1 115 aa10.51□□□□□ -0.73
UBC-208ENST00000540700 A0A0U1RRA0 63 aa10.5□□□□□ -0.73
UBC-208ENST00000540700 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
UBC-208ENST00000540700 JOSD1Q15040 202 aaPredicted RBP10.5□□□□□ -0.73
UBC-208ENST00000540700 FAT3Q8TDW7 4589 aa10.5□□□□□ -0.73
UBC-208ENST00000540700 SMIM13P0DJ93 91 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms