RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
LMO3-223ENST00000540590 C2orf48Q96LS8 159 aa8.25□□□□□ -1.09
LMO3-223ENST00000540590 TOMM7Q9P0U1 55 aa8.25□□□□□ -1.09
LMO3-223ENST00000540590 USP17L23D6RBM5 183 aa8.24□□□□□ -1.09
LMO3-223ENST00000540590 J3QQQ9 107 aa8.24□□□□□ -1.09
LMO3-223ENST00000540590 PRSS2P07478 247 aa8.24□□□□□ -1.09
LMO3-223ENST00000540590 TTTY13Q9BZ97 58 aa8.24□□□□□ -1.09
LMO3-223ENST00000540590 LINC00587B1AMM8 73 aa8.23□□□□□ -1.09
LMO3-223ENST00000540590 ZNF561-AS1K7EIQ3 104 aa8.23□□□□□ -1.09
LMO3-223ENST00000540590 LECT2O14960 151 aa8.23□□□□□ -1.09
LMO3-223ENST00000540590 SPAG11BQ08648 103 aa8.23□□□□□ -1.09
LMO3-223ENST00000540590 WFDC2Q14508 124 aa8.23□□□□□ -1.09
LMO3-223ENST00000540590 KIAA0087Q14695 138 aa8.23□□□□□ -1.09
LMO3-223ENST00000540590 HIGD2BQ4VC39 106 aa8.23□□□□□ -1.09
LMO3-223ENST00000540590 DLEU1O43261 78 aa8.22□□□□□ -1.09
LMO3-223ENST00000540590 LGALS3P17931 250 aaKnown RBP8.22□□□□□ -1.09
LMO3-223ENST00000540590 HERV-K104P63124 156 aa8.22□□□□□ -1.09
LMO3-223ENST00000540590 C6orf226Q5I0X4 101 aa8.22□□□□□ -1.09
LMO3-223ENST00000540590 PCP2Q8IVA1 136 aa8.22□□□□□ -1.09
LMO3-223ENST00000540590 LINC00526Q96FQ7 95 aa8.22□□□□□ -1.09
LMO3-223ENST00000540590 PKIGQ9Y2B9 76 aa8.22□□□□□ -1.09
LMO3-223ENST00000540590 LRCOL1A6NCL2 159 aa8.21□□□□□ -1.1
LMO3-223ENST00000540590 EREGO14944 169 aa8.21□□□□□ -1.1
LMO3-223ENST00000540590 C14orf144Q96I85 54 aa8.21□□□□□ -1.1
LMO3-223ENST00000540590 MYMXA0A1B0GTQ4 84 aa8.2□□□□□ -1.1
LMO3-223ENST00000540590 NDUFA1O15239 70 aa8.2□□□□□ -1.1
LMO3-223ENST00000540590 COX8AP10176 69 aa8.2□□□□□ -1.1
LMO3-223ENST00000540590 GCSHP23434 173 aa8.2□□□□□ -1.1
LMO3-223ENST00000540590 CKS1BP61024 79 aa8.2□□□□□ -1.1
LMO3-223ENST00000540590 LINC00336Q6ZUF6 198 aa8.2□□□□□ -1.1
LMO3-223ENST00000540590 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
LMO3-223ENST00000540590 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
LMO3-223ENST00000540590 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
LMO3-223ENST00000540590 ZNF815PA8K554 130 aa8.19□□□□□ -1.1
LMO3-223ENST00000540590 RNF151Q2KHN1 245 aa8.19□□□□□ -1.1
LMO3-223ENST00000540590 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
LMO3-223ENST00000540590 BOD1L2Q8IYS8 172 aa8.19□□□□□ -1.1
LMO3-223ENST00000540590 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
LMO3-223ENST00000540590 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
LMO3-223ENST00000540590 PRO1933Q9H354 126 aa8.19□□□□□ -1.1
LMO3-223ENST00000540590 SACSQ9NZJ4 4579 aa8.19□□□□□ -1.1
LMO3-223ENST00000540590 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.18□□□□□ -1.1
LMO3-223ENST00000540590 RTL8CO15255 209 aa8.18□□□□□ -1.1
LMO3-223ENST00000540590 CNBPP62633 177 aaKnown RBP8.18□□□□□ -1.1
LMO3-223ENST00000540590 COX17Q14061 63 aa8.18□□□□□ -1.1
LMO3-223ENST00000540590 A0A087WTM6 91 aa8.17□□□□□ -1.1
LMO3-223ENST00000540590 SLC25A34Q6PIV7 304 aa8.17□□□□□ -1.1
LMO3-223ENST00000540590 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
LMO3-223ENST00000540590 TIMM17BO60830 172 aa8.16□□□□□ -1.1
LMO3-223ENST00000540590 CIRBPQ14011 172 aaKnown RBP8.16□□□□□ -1.1
LMO3-223ENST00000540590 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
LMO3-223ENST00000540590 LCE1DQ5T752 114 aa8.16□□□□□ -1.1
LMO3-223ENST00000540590 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
LMO3-223ENST00000540590 A0A0J9YXY3 114 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 TSTD3H0UI37 97 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 SLPIP03973 132 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 Q6ZRU5 148 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 Q6ZVH6 145 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 Q8N814 137 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 KRTAP4-7Q9BYR0 210 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 UQCR10Q9UDW1 63 aa8.15□□□□□ -1.1
LMO3-223ENST00000540590 DNAH2Q9P225 4427 aa8.15□□□□□ -1.11
LMO3-223ENST00000540590 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
LMO3-223ENST00000540590 COPS9Q8WXC6 57 aa8.14□□□□□ -1.11
LMO3-223ENST00000540590 CARD19Q96LW7 228 aa8.14□□□□□ -1.11
LMO3-223ENST00000540590 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
LMO3-223ENST00000540590 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
LMO3-223ENST00000540590 FRAS1Q86XX4 4008 aa8.13□□□□□ -1.11
LMO3-223ENST00000540590 TMEM238C9JI98 176 aa8.13□□□□□ -1.11
LMO3-223ENST00000540590 C9orf116Q5BN46 136 aaPredicted RBP8.13□□□□□ -1.11
LMO3-223ENST00000540590 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
LMO3-223ENST00000540590 C2orf91Q6ZV80 131 aa8.13□□□□□ -1.11
LMO3-223ENST00000540590 HIGD1BQ9P298 99 aa8.13□□□□□ -1.11
LMO3-223ENST00000540590 DNAH10Q8IVF4 4471 aa8.13□□□□□ -1.11
LMO3-223ENST00000540590 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
LMO3-223ENST00000540590 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
LMO3-223ENST00000540590 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
LMO3-223ENST00000540590 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
LMO3-223ENST00000540590 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
LMO3-223ENST00000540590 DNAH17Q9UFH2 4485 aa8.1□□□□□ -1.11
LMO3-223ENST00000540590 A0A0U1RRA0 63 aa8.1□□□□□ -1.11
LMO3-223ENST00000540590 PFN2P35080 140 aa8.1□□□□□ -1.11
LMO3-223ENST00000540590 LITAFQ99732 161 aa8.1□□□□□ -1.11
LMO3-223ENST00000540590 SPANXB1Q9NS25 103 aaPredicted RBP8.1□□□□□ -1.11
LMO3-223ENST00000540590 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
LMO3-223ENST00000540590 HNRNPA3P51991 378 aaKnown RBP8.09□□□□□ -1.11
LMO3-223ENST00000540590 PTTG1IPP53801 180 aa8.09□□□□□ -1.11
LMO3-223ENST00000540590 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
LMO3-223ENST00000540590 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
LMO3-223ENST00000540590 KMT2CQ8NEZ4 4911 aaKnown RBP8.08□□□□□ -1.12
LMO3-223ENST00000540590 IFITM1P13164 125 aa8.08□□□□□ -1.12
LMO3-223ENST00000540590 LINC00158P58513 81 aa8.08□□□□□ -1.12
LMO3-223ENST00000540590 TAL2Q16559 108 aa8.08□□□□□ -1.12
LMO3-223ENST00000540590 SPANXDQ9BXN6 97 aa8.08□□□□□ -1.12
LMO3-223ENST00000540590 SPANXCQ9NY87 97 aa8.08□□□□□ -1.12
LMO3-223ENST00000540590 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
LMO3-223ENST00000540590 HYDINQ4G0P3 5121 aa8.07□□□□□ -1.12
LMO3-223ENST00000540590 LOC107984640A0A0U1RRK4 108 aa8.07□□□□□ -1.12
LMO3-223ENST00000540590 DAND5Q8N907 189 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms