RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
MDM1-210ENST00000540418 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
MDM1-210ENST00000540418 CXCL5P42830 114 aa9.53□□□□□ -0.88
MDM1-210ENST00000540418 HAMPP81172 84 aa9.53□□□□□ -0.88
MDM1-210ENST00000540418 CIRBPQ14011 172 aaKnown RBP9.53□□□□□ -0.88
MDM1-210ENST00000540418 PANO1I0J062 215 aa9.53□□□□□ -0.88
MDM1-210ENST00000540418 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.88
MDM1-210ENST00000540418 PLNP26678 52 aa9.52□□□□□ -0.88
MDM1-210ENST00000540418 DPH3Q96FX2 82 aa9.52□□□□□ -0.88
MDM1-210ENST00000540418 TMEM223A0PJW6 202 aa9.52□□□□□ -0.89
MDM1-210ENST00000540418 CHTF8P0CG12 524 aa9.52□□□□□ -0.89
MDM1-210ENST00000540418 SCXQ7RTU7 201 aa9.52□□□□□ -0.89
MDM1-210ENST00000540418 CIRBP-AS1Q8TBR5 109 aa9.52□□□□□ -0.89
MDM1-210ENST00000540418 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
MDM1-210ENST00000540418 A0A096LNI7 61 aa9.51□□□□□ -0.89
MDM1-210ENST00000540418 DPM2O94777 84 aa9.51□□□□□ -0.89
MDM1-210ENST00000540418 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
MDM1-210ENST00000540418 APOBP04114 4563 aaKnown RBP9.51□□□□□ -0.89
MDM1-210ENST00000540418 IGKV2-24A0A0C4DH68 120 aa9.51□□□□□ -0.89
MDM1-210ENST00000540418 S100A6P06703 90 aa9.51□□□□□ -0.89
MDM1-210ENST00000540418 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
MDM1-210ENST00000540418 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
MDM1-210ENST00000540418 KIAA1109Q2LD37 5005 aa9.5□□□□□ -0.89
MDM1-210ENST00000540418 PTTG1IPP53801 180 aa9.5□□□□□ -0.89
MDM1-210ENST00000540418 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
MDM1-210ENST00000540418 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
MDM1-210ENST00000540418 DNAH8Q96JB1 4490 aa9.49□□□□□ -0.89
MDM1-210ENST00000540418 IGKCP01834 107 aa9.49□□□□□ -0.89
MDM1-210ENST00000540418 MAJINQ3KP22 176 aa9.49□□□□□ -0.89
MDM1-210ENST00000540418 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
MDM1-210ENST00000540418 RPL18AQ02543 176 aaKnown RBP9.49□□□□□ -0.89
MDM1-210ENST00000540418 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
MDM1-210ENST00000540418 HIST3H2BBQ8N257 126 aa9.48□□□□□ -0.89
MDM1-210ENST00000540418 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
MDM1-210ENST00000540418 A0A087WYN8 130 aa9.47□□□□□ -0.89
MDM1-210ENST00000540418 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
MDM1-210ENST00000540418 Q6ZRP5 223 aa9.47□□□□□ -0.89
MDM1-210ENST00000540418 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
MDM1-210ENST00000540418 S100A2P29034 98 aa9.47□□□□□ -0.89
MDM1-210ENST00000540418 KRTDAPP60985 99 aa9.47□□□□□ -0.89
MDM1-210ENST00000540418 HSPG2P98160 4391 aa9.47□□□□□ -0.89
MDM1-210ENST00000540418 Q8N1X5 172 aa9.46□□□□□ -0.89
MDM1-210ENST00000540418 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.89
MDM1-210ENST00000540418 STPG4Q8N801 248 aa9.46□□□□□ -0.9
MDM1-210ENST00000540418 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
MDM1-210ENST00000540418 KRTAP17-1Q9BYP8 105 aa9.45□□□□□ -0.9
MDM1-210ENST00000540418 RYR1P21817 5038 aa9.45□□□□□ -0.9
MDM1-210ENST00000540418 SNRPEP62304 92 aaKnown RBP9.45□□□□□ -0.9
MDM1-210ENST00000540418 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
MDM1-210ENST00000540418 GAGE2EQ4V326 116 aa9.44□□□□□ -0.9
MDM1-210ENST00000540418 GAGE2DQ9UEU5 116 aa9.44□□□□□ -0.9
MDM1-210ENST00000540418 HERVK_113P61574 105 aa9.44□□□□□ -0.9
MDM1-210ENST00000540418 ZNF625Q96I27 306 aaPredicted RBP9.43□□□□□ -0.9
MDM1-210ENST00000540418 C5orf52A6NGY3 159 aa9.43□□□□□ -0.9
MDM1-210ENST00000540418 LEPROTO15243 131 aa9.43□□□□□ -0.9
MDM1-210ENST00000540418 PLEKHB2Q96CS7 222 aa9.42□□□□□ -0.9
MDM1-210ENST00000540418 C20orf202A1L168 122 aa9.42□□□□□ -0.9
MDM1-210ENST00000540418 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
MDM1-210ENST00000540418 EPM2AB3EWF7 344 aa9.41□□□□□ -0.9
MDM1-210ENST00000540418 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
MDM1-210ENST00000540418 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
MDM1-210ENST00000540418 HERC2O95714 4834 aa9.4□□□□□ -0.9
MDM1-210ENST00000540418 COX17Q14061 63 aa9.4□□□□□ -0.91
MDM1-210ENST00000540418 NDUFA12Q9UI09 145 aa9.4□□□□□ -0.91
MDM1-210ENST00000540418 ERG28Q9UKR5 140 aa9.4□□□□□ -0.91
MDM1-210ENST00000540418 J3QQQ9 107 aa9.39□□□□□ -0.91
MDM1-210ENST00000540418 C9orf129Q5T035 196 aaKnown RBP9.39□□□□□ -0.91
MDM1-210ENST00000540418 E9PLD3 99 aa9.39□□□□□ -0.91
MDM1-210ENST00000540418 PFN2P35080 140 aa9.39□□□□□ -0.91
MDM1-210ENST00000540418 AKR1D1P51857 326 aa9.39□□□□□ -0.91
MDM1-210ENST00000540418 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
MDM1-210ENST00000540418 HERV-K104P63124 156 aa9.39□□□□□ -0.91
MDM1-210ENST00000540418 Q5VSD8 79 aa9.39□□□□□ -0.91
MDM1-210ENST00000540418 MYMXA0A1B0GTQ4 84 aa9.38□□□□□ -0.91
MDM1-210ENST00000540418 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
MDM1-210ENST00000540418 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
MDM1-210ENST00000540418 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
MDM1-210ENST00000540418 NMUP48645 174 aa9.36□□□□□ -0.91
MDM1-210ENST00000540418 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
MDM1-210ENST00000540418 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
MDM1-210ENST00000540418 PLA2G1BP04054 148 aaKnown RBP9.36□□□□□ -0.91
MDM1-210ENST00000540418 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
MDM1-210ENST00000540418 LINC00158P58513 81 aa9.35□□□□□ -0.91
MDM1-210ENST00000540418 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
MDM1-210ENST00000540418 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
MDM1-210ENST00000540418 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
MDM1-210ENST00000540418 MEIG1Q5JSS6 88 aa9.34□□□□□ -0.91
MDM1-210ENST00000540418 SND1-IT1Q9HBX3 110 aa9.34□□□□□ -0.91
MDM1-210ENST00000540418 SMIM13P0DJ93 91 aa9.33□□□□□ -0.92
MDM1-210ENST00000540418 RPL37AP61513 92 aaKnown RBP9.33□□□□□ -0.92
MDM1-210ENST00000540418 PHF5AQ7RTV0 110 aaKnown RBP9.32□□□□□ -0.92
MDM1-210ENST00000540418 PLA2G2DQ9UNK4 145 aa9.32□□□□□ -0.92
MDM1-210ENST00000540418 FAT1Q14517 4588 aa9.32□□□□□ -0.92
MDM1-210ENST00000540418 A0A0U1RRA0 63 aa9.32□□□□□ -0.92
MDM1-210ENST00000540418 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
MDM1-210ENST00000540418 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
MDM1-210ENST00000540418 M0QXV9 152 aa9.31□□□□□ -0.92
MDM1-210ENST00000540418 TMA7Q9Y2S6 64 aaKnown RBP9.31□□□□□ -0.92
MDM1-210ENST00000540418 KRTAP10-4P60372 401 aaPredicted RBP9.3□□□□□ -0.92
MDM1-210ENST00000540418 C22orf24Q9Y442 160 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms