RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 FAM19A2Q8N3H0 131 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 ORAOV1Q8WV07 137 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 NUPR1O60356 82 aa4.49□□□□□ -1.69
LPCAT3-209ENST00000540060 IGLC3P0DOY3 106 aa4.49□□□□□ -1.69
LPCAT3-209ENST00000540060 SPAG11BQ08648 103 aa4.49□□□□□ -1.69
LPCAT3-209ENST00000540060 LINC01561Q8N1V8 128 aa4.49□□□□□ -1.69
LPCAT3-209ENST00000540060 CHAC1Q9BUX1 264 aa4.49□□□□□ -1.69
LPCAT3-209ENST00000540060 GEMIN7Q9H840 131 aaKnown RBP4.49□□□□□ -1.69
LPCAT3-209ENST00000540060 FAM30AQ9NZY2 134 aa4.49□□□□□ -1.69
LPCAT3-209ENST00000540060 CDKN2A-AS1Q9UH64 79 aa4.49□□□□□ -1.69
LPCAT3-209ENST00000540060 TRAV12-1A0A0B4J245 112 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 SMIM1B2RUZ4 78 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 XGP55808 180 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 HAMPP81172 84 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 SYCNQ0VAF6 134 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 SDIM1Q6ZPB5 146 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 Q6ZRU5 148 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 LINC00469Q8N7U9 141 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 IFI27L1Q96BM0 104 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 C2orf48Q96LS8 159 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 CARD19Q96LW7 228 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 FAT1Q14517 4588 aa4.48□□□□□ -1.69
LPCAT3-209ENST00000540060 PANO1I0J062 215 aa4.47□□□□□ -1.69
LPCAT3-209ENST00000540060 LEPROTL1O95214 131 aa4.47□□□□□ -1.69
LPCAT3-209ENST00000540060 NDUFA6P56556 154 aa4.47□□□□□ -1.69
LPCAT3-209ENST00000540060 CIRBPQ14011 172 aaKnown RBP4.47□□□□□ -1.69
LPCAT3-209ENST00000540060 CAMK2N2Q96S95 79 aa4.47□□□□□ -1.69
LPCAT3-209ENST00000540060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.47□□□□□ -1.69
LPCAT3-209ENST00000540060 C11orf86A6NJI1 115 aa4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 F8WDY8 70 aa4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 NDUFA1O15239 70 aa4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 ZNF22P17026 224 aaPredicted RBP4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 COA6Q5JTJ3 125 aaKnown RBP4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 SCXQ7RTU7 201 aa4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 Q8IZM0 81 aa4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 PACRGQ96M98 296 aaPredicted RBP4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 MRPL35Q9NZE8 188 aaKnown RBP4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 CHTOPQ9Y3Y2 248 aaKnown RBP4.46□□□□□ -1.7
LPCAT3-209ENST00000540060 ABCA13Q86UQ4 5058 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 A0A096LNI7 61 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 F8VRH5 84 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 H3BRM9 83 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 SPINK8P0C7L1 97 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 CHTF8P0CG12 524 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 FABP4P15090 132 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 RNF151Q2KHN1 245 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 C10orf25Q5T742 122 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 C2orf82Q6UX34 121 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 UNQ6190/PRO20217Q6UXQ8 127 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 CIRBP-AS1Q8TBR5 109 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 C6orf48Q9UBA6 75 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 HSPB8Q9UJY1 196 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 PKIGQ9Y2B9 76 aa4.45□□□□□ -1.7
LPCAT3-209ENST00000540060 IGLV5-39A0A0G2JS06 123 aa4.44□□□□□ -1.7
LPCAT3-209ENST00000540060 TRBV30A0A0K0K1B3 111 aa4.44□□□□□ -1.7
LPCAT3-209ENST00000540060 LOC107984640A0A0U1RRK4 108 aa4.44□□□□□ -1.7
LPCAT3-209ENST00000540060 H0Y8G0 127 aa4.44□□□□□ -1.7
LPCAT3-209ENST00000540060 PRSS2P07478 247 aa4.44□□□□□ -1.7
LPCAT3-209ENST00000540060 COX7B2Q8TF08 81 aa4.44□□□□□ -1.7
LPCAT3-209ENST00000540060 VPS13BQ7Z7G8 4022 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 IGKV2-24A0A0C4DH68 120 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 TLX1NBP0CAT3 122 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 CXCL5P42830 114 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 PTTG1IPP53801 180 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 CKS1BP61024 79 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 C6orf226Q5I0X4 101 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 Q8N1X5 172 aa4.43□□□□□ -1.7
LPCAT3-209ENST00000540060 A0A087WYN8 130 aa4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 TMEM223A0PJW6 202 aa4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 SMR3BP02814 79 aaPredicted RBP4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 RPL18AQ02543 176 aaKnown RBP4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 Q6ZRP5 223 aa4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 MAP1LC3CQ9BXW4 147 aa4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 PLAC8Q9NZF1 115 aa4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 LINC00474Q9P2X8 69 aa4.42□□□□□ -1.7
LPCAT3-209ENST00000540060 NDUFC2-KCTD14E9PQ53 114 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 SYS1-DBNDD2H3BUS1 97 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 DPM2O94777 84 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 PLNP26678 52 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 GAGE2BQ13066 116 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 MAJINQ3KP22 176 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 Q5VSD8 79 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 STPG4Q8N801 248 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 PMCHL2Q9BQD1 86 aa4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
LPCAT3-209ENST00000540060 EPM2AB3EWF7 344 aa4.4□□□□□ -1.71
LPCAT3-209ENST00000540060 IGKCP01834 107 aa4.4□□□□□ -1.71
LPCAT3-209ENST00000540060 C3orf79P0CE67 100 aa4.4□□□□□ -1.71
LPCAT3-209ENST00000540060 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
LPCAT3-209ENST00000540060 ZNF625Q96I27 306 aaPredicted RBP4.4□□□□□ -1.71
LPCAT3-209ENST00000540060 LINC01545Q5VT33 79 aa4.39□□□□□ -1.71
LPCAT3-209ENST00000540060 SFTA2Q6UW10 78 aa4.39□□□□□ -1.71
LPCAT3-209ENST00000540060 PET117Q6UWS5 81 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms