RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 USP17L23D6RBM5 183 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 NDUFA1O15239 70 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 GCSHP23434 173 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 CKS1BP61024 79 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 KIAA0087Q14695 138 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 SPATA45Q537H7 98 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 LINC00336Q6ZUF6 198 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 PAM16Q9Y3D7 125 aa8.2□□□□□ -1.1
LMO3-221ENST00000539534 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
LMO3-221ENST00000539534 RNF151Q2KHN1 245 aa8.19□□□□□ -1.1
LMO3-221ENST00000539534 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
LMO3-221ENST00000539534 C12orf57Q99622 126 aa8.19□□□□□ -1.1
LMO3-221ENST00000539534 NDUFA12Q9UI09 145 aa8.19□□□□□ -1.1
LMO3-221ENST00000539534 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.18□□□□□ -1.1
LMO3-221ENST00000539534 LRCOL1A6NCL2 159 aa8.18□□□□□ -1.1
LMO3-221ENST00000539534 COX8AP10176 69 aa8.18□□□□□ -1.1
LMO3-221ENST00000539534 CNBPP62633 177 aaKnown RBP8.18□□□□□ -1.1
LMO3-221ENST00000539534 COX17Q14061 63 aa8.18□□□□□ -1.1
LMO3-221ENST00000539534 LINC00518Q8N0U6 118 aa8.18□□□□□ -1.1
LMO3-221ENST00000539534 ZNF625Q96I27 306 aaPredicted RBP8.18□□□□□ -1.1
LMO3-221ENST00000539534 TOMM7Q9P0U1 55 aa8.18□□□□□ -1.1
LMO3-221ENST00000539534 A6NJY4 79 aa8.17□□□□□ -1.1
LMO3-221ENST00000539534 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
LMO3-221ENST00000539534 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
LMO3-221ENST00000539534 A0A087WTM6 91 aa8.16□□□□□ -1.1
LMO3-221ENST00000539534 IGKV2D-26A0A0A0MRZ7 120 aa8.16□□□□□ -1.1
LMO3-221ENST00000539534 ZNF815PA8K554 130 aa8.16□□□□□ -1.1
LMO3-221ENST00000539534 TIMM17BO60830 172 aa8.16□□□□□ -1.1
LMO3-221ENST00000539534 CIRBPQ14011 172 aaKnown RBP8.16□□□□□ -1.1
LMO3-221ENST00000539534 SLC25A34Q6PIV7 304 aa8.16□□□□□ -1.1
LMO3-221ENST00000539534 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
LMO3-221ENST00000539534 TSTD3H0UI37 97 aa8.15□□□□□ -1.1
LMO3-221ENST00000539534 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
LMO3-221ENST00000539534 MAJINQ3KP22 176 aa8.15□□□□□ -1.1
LMO3-221ENST00000539534 Q6ZVH6 145 aa8.15□□□□□ -1.1
LMO3-221ENST00000539534 Q8N814 137 aa8.15□□□□□ -1.1
LMO3-221ENST00000539534 UQCR10Q9UDW1 63 aa8.15□□□□□ -1.1
LMO3-221ENST00000539534 TSPEAR-AS2P59090 65 aa8.14□□□□□ -1.11
LMO3-221ENST00000539534 COPS9Q8WXC6 57 aa8.14□□□□□ -1.11
LMO3-221ENST00000539534 CARD19Q96LW7 228 aa8.14□□□□□ -1.11
LMO3-221ENST00000539534 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
LMO3-221ENST00000539534 A0A0J9YXY3 114 aa8.13□□□□□ -1.11
LMO3-221ENST00000539534 TMEM238C9JI98 176 aa8.13□□□□□ -1.11
LMO3-221ENST00000539534 TNP2Q05952 138 aa8.13□□□□□ -1.11
LMO3-221ENST00000539534 WFDC2Q14508 124 aa8.13□□□□□ -1.11
LMO3-221ENST00000539534 HIGD2BQ4VC39 106 aa8.13□□□□□ -1.11
LMO3-221ENST00000539534 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
LMO3-221ENST00000539534 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
LMO3-221ENST00000539534 HIGD1BQ9P298 99 aa8.13□□□□□ -1.11
LMO3-221ENST00000539534 DYNC1H1Q14204 4646 aaKnown RBP8.13□□□□□ -1.11
LMO3-221ENST00000539534 PKHD1P08F94 4074 aa8.12□□□□□ -1.11
LMO3-221ENST00000539534 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
LMO3-221ENST00000539534 PCP2Q8IVA1 136 aa8.12□□□□□ -1.11
LMO3-221ENST00000539534 ERG28Q9UKR5 140 aa8.11□□□□□ -1.11
LMO3-221ENST00000539534 MEIG1Q5JSS6 88 aa8.1□□□□□ -1.11
LMO3-221ENST00000539534 C14orf144Q96I85 54 aa8.1□□□□□ -1.11
LMO3-221ENST00000539534 MIEN1Q9BRT3 115 aa8.1□□□□□ -1.11
LMO3-221ENST00000539534 SPANXB1Q9NS25 103 aaPredicted RBP8.1□□□□□ -1.11
LMO3-221ENST00000539534 DNAH8Q96JB1 4490 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 LECT2O14960 151 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 PTTG1IPP53801 180 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 C2orf82Q6UX34 121 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 Q6ZRU5 148 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 C6orf48Q9UBA6 75 aa8.09□□□□□ -1.11
LMO3-221ENST00000539534 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
LMO3-221ENST00000539534 IFITM1P13164 125 aa8.08□□□□□ -1.12
LMO3-221ENST00000539534 TAL2Q16559 108 aa8.08□□□□□ -1.12
LMO3-221ENST00000539534 SPANXDQ9BXN6 97 aa8.08□□□□□ -1.12
LMO3-221ENST00000539534 SPANXCQ9NY87 97 aa8.08□□□□□ -1.12
LMO3-221ENST00000539534 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
LMO3-221ENST00000539534 EPPK1P58107 5090 aaKnown RBP8.08□□□□□ -1.12
LMO3-221ENST00000539534 LOC107984640A0A0U1RRK4 108 aa8.07□□□□□ -1.12
LMO3-221ENST00000539534 LOC107984156A0A0G2JMH3 177 aa8.06□□□□□ -1.12
LMO3-221ENST00000539534 SLPIP03973 132 aa8.06□□□□□ -1.12
LMO3-221ENST00000539534 C10orf25Q5T742 122 aa8.06□□□□□ -1.12
LMO3-221ENST00000539534 ARL17AQ8IVW1 177 aa8.06□□□□□ -1.12
LMO3-221ENST00000539534 LINC00526Q96FQ7 95 aa8.06□□□□□ -1.12
LMO3-221ENST00000539534 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
LMO3-221ENST00000539534 TP73-AS1Q9UF72 201 aa8.06□□□□□ -1.12
LMO3-221ENST00000539534 HNRNPA3P51991 378 aaKnown RBP8.05□□□□□ -1.12
LMO3-221ENST00000539534 LINC00158P58513 81 aa8.05□□□□□ -1.12
LMO3-221ENST00000539534 LITAFQ99732 161 aa8.05□□□□□ -1.12
LMO3-221ENST00000539534 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.04□□□□□ -1.12
LMO3-221ENST00000539534 IGLV5-52A0A0A0MRZ9 124 aa8.04□□□□□ -1.12
LMO3-221ENST00000539534 SMIM13P0DJ93 91 aa8.04□□□□□ -1.12
LMO3-221ENST00000539534 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
LMO3-221ENST00000539534 SRSF9Q13242 221 aaKnown RBP eCLIP8.04□□□□□ -1.12
LMO3-221ENST00000539534 C2orf91Q6ZV80 131 aa8.04□□□□□ -1.12
LMO3-221ENST00000539534 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
LMO3-221ENST00000539534 PFN2P35080 140 aa8.03□□□□□ -1.12
LMO3-221ENST00000539534 HSD52Q0P140 79 aa8.03□□□□□ -1.12
LMO3-221ENST00000539534 MIR7-3HGQ8N6C7 128 aa8.03□□□□□ -1.12
LMO3-221ENST00000539534 HIST1H4GQ99525 98 aa8.02□□□□□ -1.13
LMO3-221ENST00000539534 PRO1933Q9H354 126 aa8.02□□□□□ -1.13
LMO3-221ENST00000539534 TMEM238LA0A1B0GVL6 79 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms