RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 TMEM223A0PJW6 202 aa12.45□□□□□ -0.42
LINC00943-205ENST00000539315 SPINK8P0C7L1 97 aa12.45□□□□□ -0.42
LINC00943-205ENST00000539315 ATOH7Q8N100 152 aa12.45□□□□□ -0.42
LINC00943-205ENST00000539315 IGHV3-64A0A075B6Q5 118 aa12.44□□□□□ -0.42
LINC00943-205ENST00000539315 HSBP1L1C9JCN9 74 aa12.44□□□□□ -0.42
LINC00943-205ENST00000539315 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
LINC00943-205ENST00000539315 LRP1Q07954 4544 aaKnown RBP12.42□□□□□ -0.42
LINC00943-205ENST00000539315 IGLV5-52A0A0A0MRZ9 124 aa12.42□□□□□ -0.42
LINC00943-205ENST00000539315 SMIM1B2RUZ4 78 aa12.42□□□□□ -0.42
LINC00943-205ENST00000539315 USP17L23D6RBM5 183 aa12.42□□□□□ -0.42
LINC00943-205ENST00000539315 C14orf177Q52M58 125 aa12.42□□□□□ -0.42
LINC00943-205ENST00000539315 PYY3Q5JQD4 70 aa12.42□□□□□ -0.42
LINC00943-205ENST00000539315 STPG4Q8N801 248 aa12.42□□□□□ -0.42
LINC00943-205ENST00000539315 ORAOV1Q8WV07 137 aa12.42□□□□□ -0.42
LINC00943-205ENST00000539315 ZNF561-AS1K7EIQ3 104 aa12.41□□□□□ -0.42
LINC00943-205ENST00000539315 PRSS2P07478 247 aa12.41□□□□□ -0.42
LINC00943-205ENST00000539315 HMCN2Q8NDA2 5059 aa12.4□□□□□ -0.42
LINC00943-205ENST00000539315 C6orf226Q5I0X4 101 aa12.4□□□□□ -0.42
LINC00943-205ENST00000539315 NTN5Q8WTR8 489 aaPredicted RBP12.4□□□□□ -0.42
LINC00943-205ENST00000539315 TOMM7Q9P0U1 55 aa12.4□□□□□ -0.42
LINC00943-205ENST00000539315 IGLV5-39A0A0G2JS06 123 aa12.39□□□□□ -0.43
LINC00943-205ENST00000539315 LEPROTO15243 131 aa12.39□□□□□ -0.43
LINC00943-205ENST00000539315 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
LINC00943-205ENST00000539315 PLEKHB2Q96CS7 222 aa12.39□□□□□ -0.43
LINC00943-205ENST00000539315 hDV102S1A0JD36 115 aa12.38□□□□□ -0.43
LINC00943-205ENST00000539315 E9PLD3 99 aa12.38□□□□□ -0.43
LINC00943-205ENST00000539315 J3QL48 77 aa12.38□□□□□ -0.43
LINC00943-205ENST00000539315 LECT2O14960 151 aa12.38□□□□□ -0.43
LINC00943-205ENST00000539315 Q8IZM0 81 aa12.38□□□□□ -0.43
LINC00943-205ENST00000539315 Q8N814 137 aa12.38□□□□□ -0.43
LINC00943-205ENST00000539315 C15orf56Q8N910 161 aa12.38□□□□□ -0.43
LINC00943-205ENST00000539315 FAT3Q8TDW7 4589 aa12.37□□□□□ -0.43
LINC00943-205ENST00000539315 GVQW2A0A096LPI5 108 aaPredicted RBP12.37□□□□□ -0.43
LINC00943-205ENST00000539315 SPAG11BQ08648 103 aa12.37□□□□□ -0.43
LINC00943-205ENST00000539315 F8WDY8 70 aa12.36□□□□□ -0.43
LINC00943-205ENST00000539315 CKS1BP61024 79 aa12.36□□□□□ -0.43
LINC00943-205ENST00000539315 HIGD2BQ4VC39 106 aa12.36□□□□□ -0.43
LINC00943-205ENST00000539315 VAMP8Q9BV40 100 aa12.36□□□□□ -0.43
LINC00943-205ENST00000539315 LGALS3P17931 250 aaKnown RBP12.35□□□□□ -0.43
LINC00943-205ENST00000539315 S100A12P80511 92 aa12.35□□□□□ -0.43
LINC00943-205ENST00000539315 C2orf48Q96LS8 159 aa12.35□□□□□ -0.43
LINC00943-205ENST00000539315 UBR4Q5T4S7 5183 aa12.34□□□□□ -0.43
LINC00943-205ENST00000539315 J3QQQ9 107 aa12.34□□□□□ -0.43
LINC00943-205ENST00000539315 SMIM6P0DI80 62 aa12.34□□□□□ -0.43
LINC00943-205ENST00000539315 KIAA0087Q14695 138 aa12.34□□□□□ -0.43
LINC00943-205ENST00000539315 MAJINQ3KP22 176 aa12.34□□□□□ -0.43
LINC00943-205ENST00000539315 KRTAP29-1A8MX34 341 aaPredicted RBP12.33□□□□□ -0.44
LINC00943-205ENST00000539315 CXCL5P42830 114 aa12.33□□□□□ -0.44
LINC00943-205ENST00000539315 WFDC2Q14508 124 aa12.33□□□□□ -0.44
LINC00943-205ENST00000539315 ANKRD39Q53RE8 183 aa12.33□□□□□ -0.44
LINC00943-205ENST00000539315 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
LINC00943-205ENST00000539315 NMUP48645 174 aa12.32□□□□□ -0.44
LINC00943-205ENST00000539315 Q6ZSA8 131 aa12.32□□□□□ -0.44
LINC00943-205ENST00000539315 CAMK2N2Q96S95 79 aa12.32□□□□□ -0.44
LINC00943-205ENST00000539315 NDUFA1O15239 70 aa12.31□□□□□ -0.44
LINC00943-205ENST00000539315 SPATA45Q537H7 98 aa12.31□□□□□ -0.44
LINC00943-205ENST00000539315 LINC00526Q96FQ7 95 aa12.31□□□□□ -0.44
LINC00943-205ENST00000539315 PAM16Q9Y3D7 125 aa12.31□□□□□ -0.44
LINC00943-205ENST00000539315 MYMXA0A1B0GTQ4 84 aa12.3□□□□□ -0.44
LINC00943-205ENST00000539315 NDUFA12Q9UI09 145 aa12.3□□□□□ -0.44
LINC00943-205ENST00000539315 IGKV2D-26A0A0A0MRZ7 120 aa12.29□□□□□ -0.44
LINC00943-205ENST00000539315 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.29□□□□□ -0.44
LINC00943-205ENST00000539315 SYCNQ0VAF6 134 aa12.29□□□□□ -0.44
LINC00943-205ENST00000539315 PLA2G1BP04054 148 aaKnown RBP12.28□□□□□ -0.44
LINC00943-205ENST00000539315 C2orf82Q6UX34 121 aa12.28□□□□□ -0.44
LINC00943-205ENST00000539315 LINC00528Q8N1L1 170 aa12.28□□□□□ -0.44
LINC00943-205ENST00000539315 PKHD1L1Q86WI1 4243 aa12.28□□□□□ -0.44
LINC00943-205ENST00000539315 TSPEAR-AS2P59090 65 aa12.27□□□□□ -0.45
LINC00943-205ENST00000539315 HERV-K104P63124 156 aa12.27□□□□□ -0.45
LINC00943-205ENST00000539315 UNQ6190/PRO20217Q6UXQ8 127 aa12.27□□□□□ -0.45
LINC00943-205ENST00000539315 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
LINC00943-205ENST00000539315 CNBPP62633 177 aaKnown RBP12.26□□□□□ -0.45
LINC00943-205ENST00000539315 TRBV30A0A0K0K1B3 111 aa12.25□□□□□ -0.45
LINC00943-205ENST00000539315 ZNF815PA8K554 130 aa12.25□□□□□ -0.45
LINC00943-205ENST00000539315 LINC00587B1AMM8 73 aa12.25□□□□□ -0.45
LINC00943-205ENST00000539315 RNF151Q2KHN1 245 aa12.25□□□□□ -0.45
LINC00943-205ENST00000539315 ZNF625Q96I27 306 aaPredicted RBP12.25□□□□□ -0.45
LINC00943-205ENST00000539315 CARD19Q96LW7 228 aa12.25□□□□□ -0.45
LINC00943-205ENST00000539315 SLPIP03973 132 aa12.24□□□□□ -0.45
LINC00943-205ENST00000539315 Q6ZRU5 148 aa12.24□□□□□ -0.45
LINC00943-205ENST00000539315 PCP2Q8IVA1 136 aa12.24□□□□□ -0.45
LINC00943-205ENST00000539315 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
LINC00943-205ENST00000539315 C12orf57Q99622 126 aa12.23□□□□□ -0.45
LINC00943-205ENST00000539315 COX8AP10176 69 aa12.22□□□□□ -0.45
LINC00943-205ENST00000539315 KRTAP10-4P60372 401 aaPredicted RBP12.22□□□□□ -0.45
LINC00943-205ENST00000539315 LINC01620Q4KN68 170 aa12.22□□□□□ -0.45
LINC00943-205ENST00000539315 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
LINC00943-205ENST00000539315 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
LINC00943-205ENST00000539315 TTTY13Q9BZ97 58 aa12.21□□□□□ -0.45
LINC00943-205ENST00000539315 C6orf48Q9UBA6 75 aa12.21□□□□□ -0.45
LINC00943-205ENST00000539315 DLEU1O43261 78 aa12.2□□□□□ -0.46
LINC00943-205ENST00000539315 MEIG1Q5JSS6 88 aa12.2□□□□□ -0.46
LINC00943-205ENST00000539315 SLC25A34Q6PIV7 304 aa12.2□□□□□ -0.46
LINC00943-205ENST00000539315 SCGB1D4Q6XE38 83 aa12.2□□□□□ -0.46
LINC00943-205ENST00000539315 SCXQ7RTU7 201 aa12.2□□□□□ -0.46
LINC00943-205ENST00000539315 BOD1L2Q8IYS8 172 aa12.2□□□□□ -0.46
LINC00943-205ENST00000539315 LINC00518Q8N0U6 118 aa12.2□□□□□ -0.46
LINC00943-205ENST00000539315 PKIGQ9Y2B9 76 aa12.2□□□□□ -0.46
LINC00943-205ENST00000539315 COX17Q14061 63 aa12.19□□□□□ -0.46
LINC00943-205ENST00000539315 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms