RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 GVQW2A0A096LPI5 108 aaPredicted RBP10.23□□□□□ -0.77
VAMP1-207ENST00000539047 USP17L23D6RBM5 183 aa10.23□□□□□ -0.77
VAMP1-207ENST00000539047 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
VAMP1-207ENST00000539047 C15orf56Q8N910 161 aa10.23□□□□□ -0.77
VAMP1-207ENST00000539047 HIGD1BQ9P298 99 aa10.23□□□□□ -0.77
VAMP1-207ENST00000539047 DNAH1Q9P2D7 4330 aa10.23□□□□□ -0.77
VAMP1-207ENST00000539047 C1orf134Q5TEV5 83 aa10.22□□□□□ -0.77
VAMP1-207ENST00000539047 Q6ZR54 194 aa10.22□□□□□ -0.77
VAMP1-207ENST00000539047 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
VAMP1-207ENST00000539047 CAMK2N2Q96S95 79 aa10.22□□□□□ -0.77
VAMP1-207ENST00000539047 A0A0J9YXY3 114 aa10.21□□□□□ -0.77
VAMP1-207ENST00000539047 GCSHP23434 173 aa10.21□□□□□ -0.77
VAMP1-207ENST00000539047 C2orf48Q96LS8 159 aa10.21□□□□□ -0.77
VAMP1-207ENST00000539047 TIMM17BO60830 172 aa10.2□□□□□ -0.78
VAMP1-207ENST00000539047 KIAA0087Q14695 138 aa10.2□□□□□ -0.78
VAMP1-207ENST00000539047 NTN5Q8WTR8 489 aaPredicted RBP10.2□□□□□ -0.78
VAMP1-207ENST00000539047 TP73-AS1Q9UF72 201 aa10.2□□□□□ -0.78
VAMP1-207ENST00000539047 PLECQ15149 4684 aaKnown RBP10.2□□□□□ -0.78
VAMP1-207ENST00000539047 LCE6AA0A183 80 aa10.19□□□□□ -0.78
VAMP1-207ENST00000539047 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
VAMP1-207ENST00000539047 C2orf82Q6UX34 121 aa10.19□□□□□ -0.78
VAMP1-207ENST00000539047 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
VAMP1-207ENST00000539047 HIST1H4GQ99525 98 aa10.19□□□□□ -0.78
VAMP1-207ENST00000539047 LECT2O14960 151 aa10.18□□□□□ -0.78
VAMP1-207ENST00000539047 C2orf91Q6ZV80 131 aa10.18□□□□□ -0.78
VAMP1-207ENST00000539047 TRBV30A0A0K0K1B3 111 aa10.17□□□□□ -0.78
VAMP1-207ENST00000539047 M0R143 59 aa10.17□□□□□ -0.78
VAMP1-207ENST00000539047 HSD52Q0P140 79 aa10.17□□□□□ -0.78
VAMP1-207ENST00000539047 SYCNQ0VAF6 134 aa10.17□□□□□ -0.78
VAMP1-207ENST00000539047 TAL2Q16559 108 aa10.17□□□□□ -0.78
VAMP1-207ENST00000539047 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
VAMP1-207ENST00000539047 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
VAMP1-207ENST00000539047 ERG28Q9UKR5 140 aa10.17□□□□□ -0.78
VAMP1-207ENST00000539047 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
VAMP1-207ENST00000539047 EREGO14944 169 aa10.16□□□□□ -0.78
VAMP1-207ENST00000539047 LINC00158P58513 81 aa10.16□□□□□ -0.78
VAMP1-207ENST00000539047 COX17Q14061 63 aa10.16□□□□□ -0.78
VAMP1-207ENST00000539047 Q6ZVH6 145 aa10.16□□□□□ -0.78
VAMP1-207ENST00000539047 CARD19Q96LW7 228 aa10.16□□□□□ -0.78
VAMP1-207ENST00000539047 EPPK1P58107 5090 aaKnown RBP10.15□□□□□ -0.78
VAMP1-207ENST00000539047 CTAG1AP78358 180 aa10.15□□□□□ -0.78
VAMP1-207ENST00000539047 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.78
VAMP1-207ENST00000539047 Q6ZRN7 208 aaPredicted RBP10.15□□□□□ -0.78
VAMP1-207ENST00000539047 SMIM13P0DJ93 91 aa10.14□□□□□ -0.79
VAMP1-207ENST00000539047 PFN2P35080 140 aa10.14□□□□□ -0.79
VAMP1-207ENST00000539047 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
VAMP1-207ENST00000539047 SPANXCQ9NY87 97 aa10.14□□□□□ -0.79
VAMP1-207ENST00000539047 PKIGQ9Y2B9 76 aa10.14□□□□□ -0.79
VAMP1-207ENST00000539047 A0A0U1RRA0 63 aa10.12□□□□□ -0.79
VAMP1-207ENST00000539047 TMEM238LA0A1B0GVL6 79 aa10.12□□□□□ -0.79
VAMP1-207ENST00000539047 A6NJY4 79 aa10.12□□□□□ -0.79
VAMP1-207ENST00000539047 IFITM1P13164 125 aa10.12□□□□□ -0.79
VAMP1-207ENST00000539047 RNF151Q2KHN1 245 aa10.12□□□□□ -0.79
VAMP1-207ENST00000539047 Q6ZRU5 148 aa10.12□□□□□ -0.79
VAMP1-207ENST00000539047 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
VAMP1-207ENST00000539047 C6orf48Q9UBA6 75 aa10.11□□□□□ -0.79
VAMP1-207ENST00000539047 HYDINQ4G0P3 5121 aa10.11□□□□□ -0.79
VAMP1-207ENST00000539047 ALMS1Q8TCU4 4167 aa10.1□□□□□ -0.79
VAMP1-207ENST00000539047 PTTG1IPP53801 180 aa10.1□□□□□ -0.79
VAMP1-207ENST00000539047 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
VAMP1-207ENST00000539047 CEND1Q8N111 149 aa10.1□□□□□ -0.79
VAMP1-207ENST00000539047 MIR7-3HGQ8N6C7 128 aa10.1□□□□□ -0.79
VAMP1-207ENST00000539047 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.09□□□□□ -0.79
VAMP1-207ENST00000539047 A0A087WTM6 91 aa10.09□□□□□ -0.79
VAMP1-207ENST00000539047 LRCOL1A6NCL2 159 aa10.09□□□□□ -0.79
VAMP1-207ENST00000539047 CNBPP62633 177 aaKnown RBP10.09□□□□□ -0.79
VAMP1-207ENST00000539047 WFDC2Q14508 124 aa10.09□□□□□ -0.79
VAMP1-207ENST00000539047 LITAFQ99732 161 aa10.09□□□□□ -0.79
VAMP1-207ENST00000539047 BIRC6Q9NR09 4857 aa10.08□□□□□ -0.8
VAMP1-207ENST00000539047 LCE2BO14633 110 aa10.08□□□□□ -0.8
VAMP1-207ENST00000539047 HINT1P49773 126 aaPredicted RBP10.08□□□□□ -0.8
VAMP1-207ENST00000539047 BATFQ16520 125 aa10.08□□□□□ -0.8
VAMP1-207ENST00000539047 C9orf116Q5BN46 136 aaPredicted RBP10.08□□□□□ -0.8
VAMP1-207ENST00000539047 Q8N814 137 aa10.08□□□□□ -0.8
VAMP1-207ENST00000539047 DAND5Q8N907 189 aa10.08□□□□□ -0.8
VAMP1-207ENST00000539047 NDUFC2-KCTD14E9PQ53 114 aa10.07□□□□□ -0.8
VAMP1-207ENST00000539047 NPC2P61916 151 aa10.07□□□□□ -0.8
VAMP1-207ENST00000539047 ADAMTSL4-AS1Q5T5F5 129 aa10.07□□□□□ -0.8
VAMP1-207ENST00000539047 A6NDN8 102 aa10.06□□□□□ -0.8
VAMP1-207ENST00000539047 RPL18AQ02543 176 aaKnown RBP10.06□□□□□ -0.8
VAMP1-207ENST00000539047 LINC00308Q8TCZ7 52 aa10.06□□□□□ -0.8
VAMP1-207ENST00000539047 PPDPFQ9H3Y8 114 aa10.06□□□□□ -0.8
VAMP1-207ENST00000539047 LOC107984640A0A0U1RRK4 108 aa10.05□□□□□ -0.8
VAMP1-207ENST00000539047 BVES-AS1Q5T3Y7 98 aa10.05□□□□□ -0.8
VAMP1-207ENST00000539047 MUSTN1Q8IVN3 82 aa10.05□□□□□ -0.8
VAMP1-207ENST00000539047 TLX1NBP0CAT3 122 aa10.03□□□□□ -0.8
VAMP1-207ENST00000539047 SND1-IT1Q9HBX3 110 aa10.03□□□□□ -0.8
VAMP1-207ENST00000539047 SLPIP03973 132 aa10.02□□□□□ -0.81
VAMP1-207ENST00000539047 VPS13DQ5THJ4 4388 aa10.01□□□□□ -0.81
VAMP1-207ENST00000539047 RTL8CO15255 209 aa10.01□□□□□ -0.81
VAMP1-207ENST00000539047 FXYD2P54710 66 aa10.01□□□□□ -0.81
VAMP1-207ENST00000539047 GAGE2EQ4V326 116 aa10.01□□□□□ -0.81
VAMP1-207ENST00000539047 LINC00336Q6ZUF6 198 aa10.01□□□□□ -0.81
VAMP1-207ENST00000539047 NHP2Q9NX24 153 aaKnown RBP10.01□□□□□ -0.81
VAMP1-207ENST00000539047 GAGE2DQ9UEU5 116 aa10.01□□□□□ -0.81
VAMP1-207ENST00000539047 A4D1N5 150 aa10□□□□□ -0.81
VAMP1-207ENST00000539047 TNP2Q05952 138 aa10□□□□□ -0.81
VAMP1-207ENST00000539047 RAB37Q96AX2 223 aa10□□□□□ -0.81
VAMP1-207ENST00000539047 KRTAP17-1Q9BYP8 105 aa10□□□□□ -0.81
VAMP1-207ENST00000539047 IGLV5-52A0A0A0MRZ9 124 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms