RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 DEFB131AP59861 70 aa8.47□□□□□ -1.05
USP3-203ENST00000538686 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
USP3-203ENST00000538686 C11orf71Q6IPW1 123 aa8.47□□□□□ -1.05
USP3-203ENST00000538686 DMXL2Q8TDJ6 3036 aa8.47□□□□□ -1.05
USP3-203ENST00000538686 CHKB-CPT1BH3BT56 60 aa8.46□□□□□ -1.05
USP3-203ENST00000538686 PRM2P04554 102 aa8.46□□□□□ -1.05
USP3-203ENST00000538686 SPENQ96T58 3664 aaKnown RBP8.46□□□□□ -1.06
USP3-203ENST00000538686 IGHV4-28A0A0C4DH34 117 aa8.45□□□□□ -1.06
USP3-203ENST00000538686 LINC00959A0A1B0GUT2 108 aa8.45□□□□□ -1.06
USP3-203ENST00000538686 C7orf65Q6ZTY9 151 aa8.45□□□□□ -1.06
USP3-203ENST00000538686 Q8N9L7 120 aa8.45□□□□□ -1.06
USP3-203ENST00000538686 A0A1B0GW54 56 aa8.45□□□□□ -1.06
USP3-203ENST00000538686 A6NN06 94 aa8.45□□□□□ -1.06
USP3-203ENST00000538686 IGLV6-57P01721 117 aa8.45□□□□□ -1.06
USP3-203ENST00000538686 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
USP3-203ENST00000538686 ZFHX4Q86UP3 3567 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 IGLV4-60A0A075B6I1 120 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 A6NDX4 124 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 ADORA2A-AS1P86434 159 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 FAM30AQ9NZY2 134 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 SPTBN1Q01082 2364 aaKnown RBP8.44□□□□□ -1.06
USP3-203ENST00000538686 CNOT1A5YKK6 2376 aaKnown RBP8.44□□□□□ -1.06
USP3-203ENST00000538686 PCNX1Q96RV3 2341 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 TRGV2A0A075B6R0 118 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 ETDCA0A1B0GVM5 59 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 HCG22E2RYF7 251 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 HIGD2BQ4VC39 106 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 C11orf45Q8TAV5 145 aa8.44□□□□□ -1.06
USP3-203ENST00000538686 CACNA1BQ00975 2339 aa8.43□□□□□ -1.06
USP3-203ENST00000538686 CSMD1Q96PZ7 3565 aa8.43□□□□□ -1.06
USP3-203ENST00000538686 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
USP3-203ENST00000538686 C19orf84I3L1E1 186 aa8.42□□□□□ -1.06
USP3-203ENST00000538686 LCA10Q71F78 164 aa8.42□□□□□ -1.06
USP3-203ENST00000538686 SPTSSBQ8NFR3 76 aa8.42□□□□□ -1.06
USP3-203ENST00000538686 PRB1P04280 392 aa8.42□□□□□ -1.06
USP3-203ENST00000538686 Q75L30 129 aa8.41□□□□□ -1.06
USP3-203ENST00000538686 EYSQ5T1H1 3165 aa8.41□□□□□ -1.06
USP3-203ENST00000538686 VPREB1P12018 145 aa8.41□□□□□ -1.06
USP3-203ENST00000538686 FBXL19-AS1Q494R0 122 aa8.41□□□□□ -1.06
USP3-203ENST00000538686 CELA1Q9UNI1 258 aa8.41□□□□□ -1.06
USP3-203ENST00000538686 CEP290O15078 2479 aa8.4□□□□□ -1.06
USP3-203ENST00000538686 IGHV4-30-4P0DP06 118 aa8.4□□□□□ -1.06
USP3-203ENST00000538686 LY6EQ16553 131 aa8.4□□□□□ -1.06
USP3-203ENST00000538686 TECTAO75443 2155 aa8.4□□□□□ -1.07
USP3-203ENST00000538686 IGHV4-59P01825 116 aa8.39□□□□□ -1.07
USP3-203ENST00000538686 LINC00612Q8N6U2 182 aa8.39□□□□□ -1.07
USP3-203ENST00000538686 Q8N9P0 234 aaPredicted RBP8.39□□□□□ -1.07
USP3-203ENST00000538686 TRGV4A0A0C4DH28 118 aa8.39□□□□□ -1.07
USP3-203ENST00000538686 A8MU10 97 aa8.39□□□□□ -1.07
USP3-203ENST00000538686 C8orf87E5RJ46 101 aa8.39□□□□□ -1.07
USP3-203ENST00000538686 B9D2Q9BPU9 175 aa8.39□□□□□ -1.07
USP3-203ENST00000538686 TACC2O95359 2948 aa8.39□□□□□ -1.07
USP3-203ENST00000538686 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.38□□□□□ -1.07
USP3-203ENST00000538686 H3BUX3 64 aa8.38□□□□□ -1.07
USP3-203ENST00000538686 PLA2G2CQ5R387 149 aa8.38□□□□□ -1.07
USP3-203ENST00000538686 Q9BRP9 147 aa8.38□□□□□ -1.07
USP3-203ENST00000538686 MAP1BP46821 2468 aaKnown RBP8.38□□□□□ -1.07
USP3-203ENST00000538686 IGHV4-61A0A0C4DH41 118 aa8.38□□□□□ -1.07
USP3-203ENST00000538686 SPANXA2-OT1Q8N9U9 137 aa8.38□□□□□ -1.07
USP3-203ENST00000538686 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
USP3-203ENST00000538686 KIAA0087Q14695 138 aa8.37□□□□□ -1.07
USP3-203ENST00000538686 GRNP28799 593 aaKnown RBP8.36□□□□□ -1.07
USP3-203ENST00000538686 PRR15LQ9BU68 103 aa8.36□□□□□ -1.07
USP3-203ENST00000538686 MAP6D1Q9H9H5 199 aa8.36□□□□□ -1.07
USP3-203ENST00000538686 A0A1B0GUV1 79 aa8.36□□□□□ -1.07
USP3-203ENST00000538686 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
USP3-203ENST00000538686 A6NED7 52 aa8.35□□□□□ -1.07
USP3-203ENST00000538686 Q8NDZ9 215 aa8.35□□□□□ -1.07
USP3-203ENST00000538686 LINC00208Q96KT6 92 aa8.34□□□□□ -1.07
USP3-203ENST00000538686 GPR179Q6PRD1 2367 aa8.34□□□□□ -1.07
USP3-203ENST00000538686 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
USP3-203ENST00000538686 BRD3OSQ6XYD6 125 aa8.33□□□□□ -1.08
USP3-203ENST00000538686 APC2O95996 2303 aa8.33□□□□□ -1.08
USP3-203ENST00000538686 LOC100131303A0A0U1RQF7 123 aa8.32□□□□□ -1.08
USP3-203ENST00000538686 MP68P56378 58 aa8.32□□□□□ -1.08
USP3-203ENST00000538686 KLK12Q9UKR0 248 aa8.32□□□□□ -1.08
USP3-203ENST00000538686 PIEZO2Q9H5I5 2752 aa8.31□□□□□ -1.08
USP3-203ENST00000538686 NKAPP1Q8N9T2 125 aa8.31□□□□□ -1.08
USP3-203ENST00000538686 SORL1Q92673 2214 aa8.31□□□□□ -1.08
USP3-203ENST00000538686 CACNA1HO95180 2353 aa8.3□□□□□ -1.08
USP3-203ENST00000538686 PRR4Q16378 134 aa8.3□□□□□ -1.08
USP3-203ENST00000538686 A0A0J9YWU9 116 aa8.3□□□□□ -1.08
USP3-203ENST00000538686 C3orf84H3BNL1 204 aa8.3□□□□□ -1.08
USP3-203ENST00000538686 H3BPC8 53 aa8.3□□□□□ -1.08
USP3-203ENST00000538686 H3BS24 57 aa8.3□□□□□ -1.08
USP3-203ENST00000538686 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
USP3-203ENST00000538686 NOP10Q9NPE3 64 aaKnown RBP8.3□□□□□ -1.08
USP3-203ENST00000538686 C9orf116Q5BN46 136 aaPredicted RBP8.29□□□□□ -1.08
USP3-203ENST00000538686 C16orf74Q96GX8 76 aa8.29□□□□□ -1.08
USP3-203ENST00000538686 COL6A6A6NMZ7 2263 aa8.28□□□□□ -1.08
USP3-203ENST00000538686 IGLV5-48A0A075B6I7 105 aa8.26□□□□□ -1.09
USP3-203ENST00000538686 ST20-AS1Q8NBB2 130 aa8.26□□□□□ -1.09
USP3-203ENST00000538686 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
USP3-203ENST00000538686 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
USP3-203ENST00000538686 LOC400499M0QZD8 3231 aa8.24□□□□□ -1.09
USP3-203ENST00000538686 CHCHD10Q8WYQ3 142 aaPredicted RBP8.24□□□□□ -1.09
USP3-203ENST00000538686 PTPRZ1P23471 2315 aaPredicted RBP8.24□□□□□ -1.09
USP3-203ENST00000538686 MOBPQ13875 183 aa8.23□□□□□ -1.09
USP3-203ENST00000538686 KPRPQ5T749 579 aaPredicted RBP8.23□□□□□ -1.09
USP3-203ENST00000538686 C10orf99Q6UWK7 81 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms