RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MTORP42345 2549 aa13.07□□□□□ -0.32
SFSWAP-207ENST00000538548 IGHV3OR16-9A0A0B4J2B5 98 aa13.06□□□□□ -0.32
SFSWAP-207ENST00000538548 PFN2P35080 140 aa13.06□□□□□ -0.32
SFSWAP-207ENST00000538548 JMJD7-PLA2G4BH0Y9G9 81 aa13.05□□□□□ -0.32
SFSWAP-207ENST00000538548 FHL2Q14192 279 aa13.05□□□□□ -0.32
SFSWAP-207ENST00000538548 NDUFC2-KCTD14E9PQ53 114 aa13.05□□□□□ -0.32
SFSWAP-207ENST00000538548 NDUFC2O95298 119 aa13.04□□□□□ -0.32
SFSWAP-207ENST00000538548 GHRHP01286 108 aa13.04□□□□□ -0.32
SFSWAP-207ENST00000538548 LINC00167Q96N53 147 aa13.04□□□□□ -0.32
SFSWAP-207ENST00000538548 UNC79Q9P2D8 2635 aa13.04□□□□□ -0.32
SFSWAP-207ENST00000538548 IGKV3OR2-268A0A0C4DH90 116 aa13.04□□□□□ -0.32
SFSWAP-207ENST00000538548 HILS1P60008 231 aa13.04□□□□□ -0.32
SFSWAP-207ENST00000538548 DEFB114Q30KQ6 69 aa13.04□□□□□ -0.32
SFSWAP-207ENST00000538548 A0A087WZ39 114 aa13.03□□□□□ -0.32
SFSWAP-207ENST00000538548 TRAV25A0A0B4J276 109 aa13.03□□□□□ -0.32
SFSWAP-207ENST00000538548 Q5XG85 94 aa13.03□□□□□ -0.32
SFSWAP-207ENST00000538548 STHQ8IWL8 128 aa13.02□□□□□ -0.32
SFSWAP-207ENST00000538548 C4orf26Q17RF5 130 aa13.02□□□□□ -0.33
SFSWAP-207ENST00000538548 LYPD5Q6UWN5 251 aa13.02□□□□□ -0.33
SFSWAP-207ENST00000538548 ODF3L2Q3SX64 289 aa13.01□□□□□ -0.33
SFSWAP-207ENST00000538548 TRAV23DV6A0A075B6W5 121 aa13□□□□□ -0.33
SFSWAP-207ENST00000538548 IGLV4-60A0A075B6I1 120 aa12.99□□□□□ -0.33
SFSWAP-207ENST00000538548 TRBV10-3A0A0K0K1G6 114 aa12.99□□□□□ -0.33
SFSWAP-207ENST00000538548 TMEM256-PLSCR3K7ERE1 68 aa12.99□□□□□ -0.33
SFSWAP-207ENST00000538548 WFDC9Q8NEX5 89 aa12.99□□□□□ -0.33
SFSWAP-207ENST00000538548 NOP10Q9NPE3 64 aaKnown RBP12.99□□□□□ -0.33
SFSWAP-207ENST00000538548 Q8N814 137 aa12.98□□□□□ -0.33
SFSWAP-207ENST00000538548 C4orf3Q8WVX3 66 aa12.98□□□□□ -0.33
SFSWAP-207ENST00000538548 ENHOQ6UWT2 76 aa12.98□□□□□ -0.33
SFSWAP-207ENST00000538548 LINC01356Q8N9X3 169 aa12.98□□□□□ -0.33
SFSWAP-207ENST00000538548 LOC100131303A0A0U1RQF7 123 aa12.97□□□□□ -0.33
SFSWAP-207ENST00000538548 FAM19A1Q7Z5A9 133 aa12.97□□□□□ -0.33
SFSWAP-207ENST00000538548 Q6YL49 198 aa12.97□□□□□ -0.33
SFSWAP-207ENST00000538548 HRCT1Q6UXD1 115 aa12.96□□□□□ -0.33
SFSWAP-207ENST00000538548 TMEM86BQ8N661 226 aa12.96□□□□□ -0.33
SFSWAP-207ENST00000538548 J3QLI3 93 aa12.96□□□□□ -0.33
SFSWAP-207ENST00000538548 C6orf226Q5I0X4 101 aa12.96□□□□□ -0.33
SFSWAP-207ENST00000538548 UBL5Q9BZL1 73 aa12.96□□□□□ -0.33
SFSWAP-207ENST00000538548 TRBV6-8A0A0A6YYG3 113 aa12.95□□□□□ -0.34
SFSWAP-207ENST00000538548 TRGV2A0A075B6R0 118 aa12.94□□□□□ -0.34
SFSWAP-207ENST00000538548 PDZD2O15018 2839 aa12.94□□□□□ -0.34
SFSWAP-207ENST00000538548 KHDC1LQ5JSQ8 128 aa12.94□□□□□ -0.34
SFSWAP-207ENST00000538548 C20orf197Q8N268 126 aa12.94□□□□□ -0.34
SFSWAP-207ENST00000538548 DSCR9P59020 149 aa12.93□□□□□ -0.34
SFSWAP-207ENST00000538548 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
SFSWAP-207ENST00000538548 A0A096LNT2 108 aa12.92□□□□□ -0.34
SFSWAP-207ENST00000538548 C11orf68Q9H3H3 251 aaKnown RBP12.92□□□□□ -0.34
SFSWAP-207ENST00000538548 NOTCH3Q9UM47 2321 aa12.92□□□□□ -0.34
SFSWAP-207ENST00000538548 AKAP9Q99996 3911 aa12.92□□□□□ -0.34
SFSWAP-207ENST00000538548 XCL1P47992 114 aa12.92□□□□□ -0.34
SFSWAP-207ENST00000538548 FAM236DA0A1B0GTK5 79 aa12.92□□□□□ -0.34
SFSWAP-207ENST00000538548 LINC00959A0A1B0GUT2 108 aa12.92□□□□□ -0.34
SFSWAP-207ENST00000538548 FAM236CP0DP71 79 aa12.92□□□□□ -0.34
SFSWAP-207ENST00000538548 C11orf44Q8N8P7 122 aa12.91□□□□□ -0.34
SFSWAP-207ENST00000538548 C16orf74Q96GX8 76 aa12.91□□□□□ -0.34
SFSWAP-207ENST00000538548 TRGV4A0A0C4DH28 118 aa12.9□□□□□ -0.34
SFSWAP-207ENST00000538548 PLAC8L1A1L4L8 177 aa12.9□□□□□ -0.34
SFSWAP-207ENST00000538548 BCE1O60756 84 aa12.9□□□□□ -0.34
SFSWAP-207ENST00000538548 A0A1W2PRX2 142 aa12.9□□□□□ -0.35
SFSWAP-207ENST00000538548 Q8IZM0 81 aa12.9□□□□□ -0.35
SFSWAP-207ENST00000538548 NIPBLQ6KC79 2804 aaeCLIP12.89□□□□□ -0.351e-6■□□□□ 10
SFSWAP-207ENST00000538548 FLNBO75369 2602 aaKnown RBP12.88□□□□□ -0.35
SFSWAP-207ENST00000538548 EPM2AB3EWF7 344 aa12.88□□□□□ -0.35
SFSWAP-207ENST00000538548 FSHBP01225 129 aa12.88□□□□□ -0.35
SFSWAP-207ENST00000538548 TRAV7A0A075B6U4 112 aa12.87□□□□□ -0.35
SFSWAP-207ENST00000538548 PRR3P79522 188 aaKnown RBP12.87□□□□□ -0.35
SFSWAP-207ENST00000538548 CR1P17927 2039 aa12.87□□□□□ -0.35
SFSWAP-207ENST00000538548 H7BZZ5 65 aa12.86□□□□□ -0.35
SFSWAP-207ENST00000538548 SERP1Q9Y6X1 66 aa12.86□□□□□ -0.35
SFSWAP-207ENST00000538548 GIG44P09565 113 aaPredicted RBP12.85□□□□□ -0.35
SFSWAP-207ENST00000538548 Q6ZQT0 140 aa12.84□□□□□ -0.35
SFSWAP-207ENST00000538548 MRAPQ8TCY5 172 aa12.84□□□□□ -0.35
SFSWAP-207ENST00000538548 RNASE1P07998 156 aaKnown RBP12.84□□□□□ -0.35
SFSWAP-207ENST00000538548 PLA2G2AP14555 144 aa12.84□□□□□ -0.35
SFSWAP-207ENST00000538548 RBM3P98179 157 aaKnown RBP12.83□□□□□ -0.36
SFSWAP-207ENST00000538548 DEFB113Q30KQ7 82 aa12.83□□□□□ -0.36
SFSWAP-207ENST00000538548 WFDC11Q8NEX6 87 aa12.83□□□□□ -0.36
SFSWAP-207ENST00000538548 LOC110117498A0A087WWA1 95 aa12.82□□□□□ -0.36
SFSWAP-207ENST00000538548 KLKP1Q107X0 134 aa12.82□□□□□ -0.36
SFSWAP-207ENST00000538548 COX17Q14061 63 aa12.82□□□□□ -0.36
SFSWAP-207ENST00000538548 C6orf99Q4VX62 202 aa12.82□□□□□ -0.36
SFSWAP-207ENST00000538548 WNK1Q9H4A3 2382 aa12.81□□□□□ -0.36
SFSWAP-207ENST00000538548 ZNF561-AS1K7EIQ3 104 aa12.8□□□□□ -0.36
SFSWAP-207ENST00000538548 LINC01547P58512 204 aaPredicted RBP12.8□□□□□ -0.36
SFSWAP-207ENST00000538548 LINC00575Q6W349 94 aa12.8□□□□□ -0.36
SFSWAP-207ENST00000538548 LINC00482Q8N8I6 264 aa12.8□□□□□ -0.36
SFSWAP-207ENST00000538548 OTOGQ6ZRI0 2925 aa12.8□□□□□ -0.36
SFSWAP-207ENST00000538548 J3QKU1 62 aa12.79□□□□□ -0.36
SFSWAP-207ENST00000538548 A0A1B0GUV1 79 aa12.78□□□□□ -0.36
SFSWAP-207ENST00000538548 IGHV4-31P0DP07 118 aa12.78□□□□□ -0.36
SFSWAP-207ENST00000538548 C6orf223Q8N319 242 aa12.77□□□□□ -0.36
SFSWAP-207ENST00000538548 KRTAP1-3Q8IUG1 177 aa12.77□□□□□ -0.37
SFSWAP-207ENST00000538548 JMJD1CQ15652 2540 aa12.77□□□□□ -0.37
SFSWAP-207ENST00000538548 Q6ZVQ6 151 aa12.76□□□□□ -0.37
SFSWAP-207ENST00000538548 LAMTOR3Q9UHA4 124 aa12.76□□□□□ -0.37
SFSWAP-207ENST00000538548 KIAA0087Q14695 138 aa12.76□□□□□ -0.37
SFSWAP-207ENST00000538548 CMC4P56277 68 aaPredicted RBP12.75□□□□□ -0.37
SFSWAP-207ENST00000538548 HAMPP81172 84 aa12.75□□□□□ -0.37
SFSWAP-207ENST00000538548 CSNK1G2-AS1Q8NCQ2 148 aa12.75□□□□□ -0.37
SFSWAP-207ENST00000538548 CXCL6P80162 114 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms